RNA–Protein interactions for RNA: ENST00000556869.1

LINC00871-203, long intergenic non-protein coding RNA 871, humanhuman

TSL 2

Gene LINC00871, Length 456 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-203ENST00000556869 TRBV7-1A0A0A6YYK4 115 aa-0.1□□□□□ -2.43
LINC00871-203ENST00000556869 CCDC179H3BU77 68 aa-0.1□□□□□ -2.43
LINC00871-203ENST00000556869 SCTP09683 121 aa-0.1□□□□□ -2.43
LINC00871-203ENST00000556869 ACYP2P14621 99 aa-0.1□□□□□ -2.43
LINC00871-203ENST00000556869 NPC2P61916 151 aa-0.1□□□□□ -2.43
LINC00871-203ENST00000556869 SSBP1Q04837 148 aaKnown RBP-0.1□□□□□ -2.43
LINC00871-203ENST00000556869 CCDC153Q494R4 210 aa-0.1□□□□□ -2.43
LINC00871-203ENST00000556869 ATP11AUNQ6ZP68 121 aa-0.1□□□□□ -2.43
LINC00871-203ENST00000556869 C20orf197Q8N268 126 aa-0.1□□□□□ -2.43
LINC00871-203ENST00000556869 ANKRD17O75179 2603 aaKnown RBP-0.1□□□□□ -2.43
LINC00871-203ENST00000556869 PLXNA1Q9UIW2 1896 aa-0.11□□□□□ -2.43
LINC00871-203ENST00000556869 A0A087WTM6 91 aa-0.11□□□□□ -2.43
LINC00871-203ENST00000556869 TRAV12-3A0A0B4J271 114 aa-0.11□□□□□ -2.43
LINC00871-203ENST00000556869 SPCS2Q15005 226 aa-0.11□□□□□ -2.43
LINC00871-203ENST00000556869 COX7B2Q8TF08 81 aa-0.11□□□□□ -2.43
LINC00871-203ENST00000556869 MRPL40Q9NQ50 206 aaKnown RBP-0.11□□□□□ -2.43
LINC00871-203ENST00000556869 SPANXCQ9NY87 97 aa-0.11□□□□□ -2.43
LINC00871-203ENST00000556869 LSM2Q9Y333 95 aaKnown RBP-0.11□□□□□ -2.43
LINC00871-203ENST00000556869 V9GYV3 84 aa-0.11□□□□□ -2.43
LINC00871-203ENST00000556869 SSC5DA1L4H1 1573 aa-0.11□□□□□ -2.43
LINC00871-203ENST00000556869 WNK2Q9Y3S1 2297 aa-0.12□□□□□ -2.43
LINC00871-203ENST00000556869 M0R2P5 195 aa-0.12□□□□□ -2.43
LINC00871-203ENST00000556869 DBIP07108 87 aaKnown RBP-0.12□□□□□ -2.43
LINC00871-203ENST00000556869 NBEAP1P0C6P0 100 aa-0.12□□□□□ -2.43
LINC00871-203ENST00000556869 GCHFRP30047 84 aa-0.12□□□□□ -2.43
LINC00871-203ENST00000556869 NCS1P62166 190 aa-0.12□□□□□ -2.43
LINC00871-203ENST00000556869 SPANXA1Q9NS26 97 aa-0.12□□□□□ -2.43
LINC00871-203ENST00000556869 DOCK11Q5JSL3 2073 aa-0.13□□□□□ -2.43
LINC00871-203ENST00000556869 SYNJ1O43426 1573 aa-0.13□□□□□ -2.43
LINC00871-203ENST00000556869 ERCC6Q03468 1493 aa-0.13□□□□□ -2.43
LINC00871-203ENST00000556869 ARAP1Q96P48 1450 aa-0.13□□□□□ -2.43
LINC00871-203ENST00000556869 TMEM14DPA8MWL7 114 aa-0.13□□□□□ -2.43
LINC00871-203ENST00000556869 Q6ZRX8 168 aa-0.13□□□□□ -2.43
LINC00871-203ENST00000556869 Q96NJ1 140 aa-0.13□□□□□ -2.43
LINC00871-203ENST00000556869 AIF1LQ9BQI0 150 aa-0.13□□□□□ -2.43
LINC00871-203ENST00000556869 SCP2D1Q9UJQ7 156 aa-0.13□□□□□ -2.43
LINC00871-203ENST00000556869 PHIPQ8WWQ0 1821 aa-0.13□□□□□ -2.43
LINC00871-203ENST00000556869 NRXN2Q9P2S2 1712 aa-0.13□□□□□ -2.43
LINC00871-203ENST00000556869 AKAP11Q9UKA4 1901 aa-0.14□□□□□ -2.43
LINC00871-203ENST00000556869 TRBV20-1A0A075B6N2 111 aa-0.14□□□□□ -2.43
LINC00871-203ENST00000556869 TRGV1A0A0A0MS02 117 aa-0.14□□□□□ -2.43
LINC00871-203ENST00000556869 CFDP00746 253 aaPredicted RBP-0.14□□□□□ -2.43
LINC00871-203ENST00000556869 LINC01545Q5VT33 79 aa-0.14□□□□□ -2.43
LINC00871-203ENST00000556869 RPL7L1Q6DKI1 246 aaKnown RBP-0.14□□□□□ -2.43
LINC00871-203ENST00000556869 TAC4Q86UU9 113 aa-0.14□□□□□ -2.43
LINC00871-203ENST00000556869 UBE2DNLQ8IWF7 75 aa-0.14□□□□□ -2.43
LINC00871-203ENST00000556869 MMGT1Q8N4V1 131 aa-0.14□□□□□ -2.43
LINC00871-203ENST00000556869 NDUFA12Q9UI09 145 aa-0.14□□□□□ -2.43
LINC00871-203ENST00000556869 UBR5O95071 2799 aaPredicted RBP-0.14□□□□□ -2.43
LINC00871-203ENST00000556869 KIAA0100Q14667 2235 aaKnown RBP-0.14□□□□□ -2.43
LINC00871-203ENST00000556869 PARP14Q460N5 1801 aa-0.15□□□□□ -2.43
LINC00871-203ENST00000556869 C10orf142B7Z368 130 aa-0.15□□□□□ -2.43
LINC00871-203ENST00000556869 M0R129 80 aa-0.15□□□□□ -2.43
LINC00871-203ENST00000556869 INSL4Q14641 139 aa-0.15□□□□□ -2.43
LINC00871-203ENST00000556869 MORN2Q502X0 79 aa-0.15□□□□□ -2.43
LINC00871-203ENST00000556869 SPANXN1Q5VSR9 72 aa-0.15□□□□□ -2.43
LINC00871-203ENST00000556869 MIC13Q5XKP0 118 aa-0.15□□□□□ -2.43
LINC00871-203ENST00000556869 VSTM2AQ8TAG5 236 aa-0.15□□□□□ -2.43
LINC00871-203ENST00000556869 SAR1AQ9NR31 198 aa-0.15□□□□□ -2.43
LINC00871-203ENST00000556869 BATF3Q9NR55 127 aa-0.15□□□□□ -2.43
LINC00871-203ENST00000556869 UNC79Q9P2D8 2635 aa-0.15□□□□□ -2.43
LINC00871-203ENST00000556869 MYH13Q9UKX3 1938 aa-0.15□□□□□ -2.43
LINC00871-203ENST00000556869 ABCA2Q9BZC7 2435 aa-0.15□□□□□ -2.43
LINC00871-203ENST00000556869 ZNF815PA8K554 130 aa-0.16□□□□□ -2.44
LINC00871-203ENST00000556869 PIRTP0C851 137 aa-0.16□□□□□ -2.44
LINC00871-203ENST00000556869 EDDM3BP56851 147 aa-0.16□□□□□ -2.44
LINC00871-203ENST00000556869 SSBP3-AS1Q7Z2R9 100 aa-0.16□□□□□ -2.44
LINC00871-203ENST00000556869 CTAGE3PQ8IX95 158 aa-0.16□□□□□ -2.44
LINC00871-203ENST00000556869 RPRMQ9NS64 109 aa-0.16□□□□□ -2.44
LINC00871-203ENST00000556869 ARFGEF1Q9Y6D6 1849 aa-0.16□□□□□ -2.44
LINC00871-203ENST00000556869 GOLGA3Q08378 1498 aa-0.16□□□□□ -2.44
LINC00871-203ENST00000556869 FAM236AA0A1B0GUQ0 79 aa-0.17□□□□□ -2.44
LINC00871-203ENST00000556869 FAM236BA0A1B0GV22 79 aa-0.17□□□□□ -2.44
LINC00871-203ENST00000556869 A6NIN4 97 aa-0.17□□□□□ -2.44
LINC00871-203ENST00000556869 SCGB1A1P11684 91 aa-0.17□□□□□ -2.44
LINC00871-203ENST00000556869 B2MP61769 119 aa-0.17□□□□□ -2.44
LINC00871-203ENST00000556869 C10orf82Q8WW14 230 aa-0.17□□□□□ -2.44
LINC00871-203ENST00000556869 CDK5RAP2Q96SN8 1893 aa-0.17□□□□□ -2.44
LINC00871-203ENST00000556869 PSMG3Q9BT73 122 aaPredicted RBP-0.17□□□□□ -2.44
LINC00871-203ENST00000556869 SMIM3Q9BZL3 60 aa-0.17□□□□□ -2.44
LINC00871-203ENST00000556869 MUC22E2RYF6 1773 aaPredicted RBP-0.17□□□□□ -2.44
LINC00871-203ENST00000556869 MYH9P35579 1960 aaKnown RBP-0.17□□□□□ -2.44
LINC00871-203ENST00000556869 IBTKQ9P2D0 1353 aaPredicted RBP-0.18□□□□□ -2.44
LINC00871-203ENST00000556869 OVOS2A0A0J9YW53 1432 aa-0.18□□□□□ -2.44
LINC00871-203ENST00000556869 OVOS2Q6IE36 1432 aa-0.18□□□□□ -2.44
LINC00871-203ENST00000556869 TRAV1-2A0A0B4J238 106 aa-0.18□□□□□ -2.44
LINC00871-203ENST00000556869 FAM92AA1XBS5 289 aa-0.18□□□□□ -2.44
LINC00871-203ENST00000556869 J3QR89 54 aa-0.18□□□□□ -2.44
LINC00871-203ENST00000556869 IFNA17P01571 189 aa-0.18□□□□□ -2.44
LINC00871-203ENST00000556869 IGLC6P0CF74 106 aa-0.18□□□□□ -2.44
LINC00871-203ENST00000556869 SMIM6P0DI80 62 aa-0.18□□□□□ -2.44
LINC00871-203ENST00000556869 HIST1H1AQ02539 215 aaPredicted RBP-0.18□□□□□ -2.44
LINC00871-203ENST00000556869 C9orf116Q5BN46 136 aaPredicted RBP-0.18□□□□□ -2.44
LINC00871-203ENST00000556869 PRO0255Q9UI72 69 aa-0.18□□□□□ -2.44
LINC00871-203ENST00000556869 NCOR1O75376 2440 aa-0.18□□□□□ -2.44
LINC00871-203ENST00000556869 LAMB1P07942 1786 aa-0.19□□□□□ -2.44
LINC00871-203ENST00000556869 CELSR2Q9HCU4 2923 aa-0.19□□□□□ -2.44
LINC00871-203ENST00000556869 A0A0D9SFI3 127 aa-0.19□□□□□ -2.44
LINC00871-203ENST00000556869 TRBV10-3A0A0K0K1G6 114 aa-0.19□□□□□ -2.44
LINC00871-203ENST00000556869 G3V318 75 aa-0.19□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms