RNA–Protein interactions for RNA: ENST00000556869.1

LINC00871-203, long intergenic non-protein coding RNA 871, humanhuman

TSL 2

Gene LINC00871, Length 456 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-203ENST00000556869 AEBP2Q6ZN18 517 aaPredicted RBP25.3■■□□□ 1.64
LINC00871-203ENST00000556869 CHIC1Q5VXU3 224 aa23.9■■□□□ 1.42
LINC00871-203ENST00000556869 SENP3Q9H4L4 574 aaPredicted RBP21.56■■□□□ 1.04
LINC00871-203ENST00000556869 PHF23Q9BUL5 403 aaPredicted RBP21.28■■□□□ 1
LINC00871-203ENST00000556869 FOXD1Q16676 465 aa20.14■□□□□ 0.81
LINC00871-203ENST00000556869 PLPPR3Q6T4P5 718 aa19.04■□□□□ 0.64
LINC00871-203ENST00000556869 POTEDQ86YR6 584 aa18.95■□□□□ 0.62
LINC00871-203ENST00000556869 MSH5O43196 834 aa18.86■□□□□ 0.61
LINC00871-203ENST00000556869 PIAS4Q8N2W9 510 aaPredicted RBP18.81■□□□□ 0.6
LINC00871-203ENST00000556869 PPP6R1Q9UPN7 881 aa18.75■□□□□ 0.59
LINC00871-203ENST00000556869 ADRA2BP18089 450 aa18.7■□□□□ 0.58
LINC00871-203ENST00000556869 MAPK8IP2Q13387 824 aaPredicted RBP17.22■□□□□ 0.35
LINC00871-203ENST00000556869 DMRT2Q9Y5R5 561 aa17.08■□□□□ 0.32
LINC00871-203ENST00000556869 SCAF1Q9H7N4 1312 aaKnown RBP17.05■□□□□ 0.32
LINC00871-203ENST00000556869 PPP4R3CPQ6ZMV5 832 aa16.69■□□□□ 0.26
LINC00871-203ENST00000556869 DCAF8L1A6NGE4 600 aa16.47■□□□□ 0.23
LINC00871-203ENST00000556869 HOXD11P31277 338 aaPredicted RBP16.4■□□□□ 0.22
LINC00871-203ENST00000556869 CNKSR2Q8WXI2 1034 aa16.38■□□□□ 0.21
LINC00871-203ENST00000556869 CACNB1Q02641 598 aaPredicted RBP16.36■□□□□ 0.21
LINC00871-203ENST00000556869 RNF216Q9NWF9 866 aaPredicted RBP16.26■□□□□ 0.19
LINC00871-203ENST00000556869 RNF39Q9H2S5 420 aa16.08■□□□□ 0.16
LINC00871-203ENST00000556869 NCBP3Q53F19 620 aaKnown RBP15.99■□□□□ 0.15
LINC00871-203ENST00000556869 C1QBPQ07021 282 aaKnown RBP15.82■□□□□ 0.12
LINC00871-203ENST00000556869 NPM3O75607 178 aaKnown RBP15.79■□□□□ 0.12
LINC00871-203ENST00000556869 DNAJC5BQ9UF47 199 aa15.79■□□□□ 0.12
LINC00871-203ENST00000556869 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.67■□□□□ 0.1
LINC00871-203ENST00000556869 KCNA4P22459 653 aa15.42■□□□□ 0.06
LINC00871-203ENST00000556869 U3KPZ7 1027 aaPredicted RBP15.33■□□□□ 0.04
LINC00871-203ENST00000556869 SPINK5Q9NQ38 1064 aaPredicted RBP15.16■□□□□ 0.02
LINC00871-203ENST00000556869 CAPN15O75808 1086 aa15.14■□□□□ 0.01
LINC00871-203ENST00000556869 SLC4A2P04920 1241 aa15.11■□□□□ 0.01
LINC00871-203ENST00000556869 DSG3P32926 999 aa15.04■□□□□ -0
LINC00871-203ENST00000556869 TRHP20396 242 aaPredicted RBP14.88□□□□□ -0.03
LINC00871-203ENST00000556869 APLP2Q06481 763 aa14.84□□□□□ -0.03
LINC00871-203ENST00000556869 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.81□□□□□ -0.04
LINC00871-203ENST00000556869 HNRNPUL2Q1KMD3 747 aaKnown RBP14.81□□□□□ -0.04
LINC00871-203ENST00000556869 ABCB7O75027 752 aa14.8□□□□□ -0.04
LINC00871-203ENST00000556869 ZNF219Q9P2Y4 722 aaPredicted RBP14.8□□□□□ -0.04
LINC00871-203ENST00000556869 POTEHQ6S545 545 aa14.78□□□□□ -0.04
LINC00871-203ENST00000556869 SAMD1Q6SPF0 538 aaPredicted RBP14.74□□□□□ -0.05
LINC00871-203ENST00000556869 MYCNP04198 464 aaPredicted RBP14.6□□□□□ -0.07
LINC00871-203ENST00000556869 SLC4A1APQ9BWU0 796 aaKnown RBP14.52□□□□□ -0.09
LINC00871-203ENST00000556869 POLA2Q14181 598 aa14.42□□□□□ -0.1
LINC00871-203ENST00000556869 FOXD4L1Q9NU39 408 aa14.4□□□□□ -0.1
LINC00871-203ENST00000556869 RBM42Q9BTD8 480 aaKnown RBP14.34□□□□□ -0.11
LINC00871-203ENST00000556869 ATF5Q9Y2D1 282 aaPredicted RBP14.3□□□□□ -0.12
LINC00871-203ENST00000556869 ZBTB22O15209 634 aa14.18□□□□□ -0.14
LINC00871-203ENST00000556869 CHRDL2Q6WN34 429 aa14.09□□□□□ -0.15
LINC00871-203ENST00000556869 ZBTB12Q9Y330 459 aaPredicted RBP14.08□□□□□ -0.16
LINC00871-203ENST00000556869 OSCARQ8IYS5 282 aa14.01□□□□□ -0.17
LINC00871-203ENST00000556869 AKT1S1Q96B36 256 aa13.97□□□□□ -0.17
LINC00871-203ENST00000556869 ATXN8OSP0DMR3 200 aa13.9□□□□□ -0.18
LINC00871-203ENST00000556869 REM2Q8IYK8 340 aaPredicted RBP13.87□□□□□ -0.19
LINC00871-203ENST00000556869 PITPNM1O00562 1244 aa13.75□□□□□ -0.21
LINC00871-203ENST00000556869 FBLN2P98095 1184 aa13.73□□□□□ -0.21
LINC00871-203ENST00000556869 PIP4P2Q8N4L2 257 aa13.73□□□□□ -0.21
LINC00871-203ENST00000556869 SP7Q8TDD2 431 aaPredicted RBP13.7□□□□□ -0.22
LINC00871-203ENST00000556869 SPDYE2BA6NHP3 402 aa13.65□□□□□ -0.22
LINC00871-203ENST00000556869 SPDYE6P0CI01 402 aa13.65□□□□□ -0.22
LINC00871-203ENST00000556869 SPDYE2Q495Y8 402 aa13.65□□□□□ -0.22
LINC00871-203ENST00000556869 MKRN4PQ13434 485 aaPredicted RBP13.63□□□□□ -0.23
LINC00871-203ENST00000556869 FXR2P51116 673 aaKnown RBP eCLIP13.61□□□□□ -0.23
LINC00871-203ENST00000556869 HAX1O00165 279 aa13.53□□□□□ -0.24
LINC00871-203ENST00000556869 ZNF692Q9BU19 519 aaPredicted RBP13.5□□□□□ -0.25
LINC00871-203ENST00000556869 CLEC11AQ9Y240 323 aa13.49□□□□□ -0.25
LINC00871-203ENST00000556869 SSUH2Q9Y2M2 353 aa13.46□□□□□ -0.25
LINC00871-203ENST00000556869 SPDYE1Q8NFV5 336 aaPredicted RBP13.45□□□□□ -0.26
LINC00871-203ENST00000556869 CSRNP3Q8WYN3 585 aa13.42□□□□□ -0.26
LINC00871-203ENST00000556869 PRKAR2AP13861 404 aaKnown RBP13.39□□□□□ -0.27
LINC00871-203ENST00000556869 EVX2Q03828 476 aa13.37□□□□□ -0.27
LINC00871-203ENST00000556869 PABPN1Q86U42 306 aaKnown RBP eCLIP13.31□□□□□ -0.28
LINC00871-203ENST00000556869 CHADLQ6NUI6 762 aa13.25□□□□□ -0.29
LINC00871-203ENST00000556869 EHMT2Q96KQ7 1210 aa13.25□□□□□ -0.29
LINC00871-203ENST00000556869 PRR29P0C7W0 189 aa13.21□□□□□ -0.29
LINC00871-203ENST00000556869 C19orf67A6NJJ6 358 aa13.18□□□□□ -0.3
LINC00871-203ENST00000556869 GABBR2O75899 941 aa13.03□□□□□ -0.32
LINC00871-203ENST00000556869 FARP1Q9Y4F1 1045 aaPredicted RBP12.99□□□□□ -0.33
LINC00871-203ENST00000556869 CD44P16070 742 aaKnown RBP12.97□□□□□ -0.33
LINC00871-203ENST00000556869 SPDYE4A6NLX3 237 aa12.93□□□□□ -0.34
LINC00871-203ENST00000556869 CREBZFQ9NS37 354 aa12.86□□□□□ -0.35
LINC00871-203ENST00000556869 STAG3Q9UJ98 1225 aa12.86□□□□□ -0.35
LINC00871-203ENST00000556869 LHX8Q68G74 356 aa12.85□□□□□ -0.35
LINC00871-203ENST00000556869 POTEIP0CG38 1075 aa12.77□□□□□ -0.37
LINC00871-203ENST00000556869 ZRANB1Q9UGI0 708 aa12.77□□□□□ -0.37
LINC00871-203ENST00000556869 ZNF579Q8NAF0 562 aaKnown RBP12.73□□□□□ -0.37
LINC00871-203ENST00000556869 CLCN6P51797 869 aa12.7□□□□□ -0.38
LINC00871-203ENST00000556869 DCBLD2Q96PD2 775 aa12.66□□□□□ -0.38
LINC00871-203ENST00000556869 GALR2O43603 387 aaPredicted RBP12.63□□□□□ -0.39
LINC00871-203ENST00000556869 PAK3O75914 559 aaPredicted RBP12.62□□□□□ -0.39
LINC00871-203ENST00000556869 MNX1P50219 401 aaPredicted RBP12.61□□□□□ -0.39
LINC00871-203ENST00000556869 PHF12Q96QT6 1004 aa12.61□□□□□ -0.39
LINC00871-203ENST00000556869 NPM1P06748 294 aaKnown RBP eCLIP12.59□□□□□ -0.39
LINC00871-203ENST00000556869 PROM2Q8N271 834 aa12.55□□□□□ -0.4
LINC00871-203ENST00000556869 TSPYL2Q9H2G4 693 aaPredicted RBP12.43□□□□□ -0.42
LINC00871-203ENST00000556869 MS4A3Q96HJ5 214 aa12.42□□□□□ -0.42
LINC00871-203ENST00000556869 PELP1Q8IZL8 1130 aaKnown RBP12.37□□□□□ -0.43
LINC00871-203ENST00000556869 POTEB2H3BUK9 544 aa12.35□□□□□ -0.43
LINC00871-203ENST00000556869 MIER1Q8N108 512 aa12.35□□□□□ -0.43
LINC00871-203ENST00000556869 OTUD5Q96G74 571 aa12.34□□□□□ -0.43
LINC00871-203ENST00000556869 CCDC61Q9Y6R9 512 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms