RNA–Protein interactions for RNA: ENST00000554707.1

PCNX1-208, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-208ENST00000554707 CENPHQ9H3R5 247 aa-0.52□□□□□ -2.49
PCNX1-208ENST00000554707 ABCA4P78363 2273 aa-0.52□□□□□ -2.49
PCNX1-208ENST00000554707 TRAV12-3A0A0B4J271 114 aa-0.53□□□□□ -2.49
PCNX1-208ENST00000554707 J3QLW9 94 aa-0.53□□□□□ -2.49
PCNX1-208ENST00000554707 DEGS1O15121 323 aa-0.53□□□□□ -2.49
PCNX1-208ENST00000554707 VIRMAQ69YN4 1812 aaKnown RBP-0.53□□□□□ -2.49
PCNX1-208ENST00000554707 F5P12259 2224 aa-0.53□□□□□ -2.49
PCNX1-208ENST00000554707 CADP27708 2225 aa-0.53□□□□□ -2.49
PCNX1-208ENST00000554707 HSPG2P98160 4391 aa-0.54□□□□□ -2.5
PCNX1-208ENST00000554707 TRAV36DV7A0A075B6V5 113 aa-0.54□□□□□ -2.5
PCNX1-208ENST00000554707 TSTD3H0UI37 97 aa-0.54□□□□□ -2.5
PCNX1-208ENST00000554707 TNFSF15O95150 251 aa-0.54□□□□□ -2.5
PCNX1-208ENST00000554707 RPS28P62857 69 aaKnown RBP-0.54□□□□□ -2.5
PCNX1-208ENST00000554707 INSL4Q14641 139 aa-0.54□□□□□ -2.5
PCNX1-208ENST00000554707 ATP11AUNQ6ZP68 121 aa-0.54□□□□□ -2.5
PCNX1-208ENST00000554707 TCTE3Q8IZS6 198 aa-0.54□□□□□ -2.5
PCNX1-208ENST00000554707 PRO0255Q9UI72 69 aa-0.54□□□□□ -2.5
PCNX1-208ENST00000554707 LSM2Q9Y333 95 aaKnown RBP-0.54□□□□□ -2.5
PCNX1-208ENST00000554707 MYH1P12882 1939 aa-0.54□□□□□ -2.5
PCNX1-208ENST00000554707 HELZP42694 1942 aaKnown RBP-0.55□□□□□ -2.5
PCNX1-208ENST00000554707 CCDC179H3BU77 68 aa-0.55□□□□□ -2.5
PCNX1-208ENST00000554707 M0R3E3 92 aa-0.55□□□□□ -2.5
PCNX1-208ENST00000554707 SMIM15Q7Z3B0 74 aa-0.55□□□□□ -2.5
PCNX1-208ENST00000554707 CYP4F30PQ9H0H9 118 aa-0.55□□□□□ -2.5
PCNX1-208ENST00000554707 BATF3Q9NR55 127 aa-0.55□□□□□ -2.5
PCNX1-208ENST00000554707 HIGD1AQ9Y241 93 aa-0.55□□□□□ -2.5
PCNX1-208ENST00000554707 MED13LQ71F56 2210 aa-0.56□□□□□ -2.5
PCNX1-208ENST00000554707 KDM5CP41229 1560 aa-0.56□□□□□ -2.5
PCNX1-208ENST00000554707 YPEL1O60688 119 aa-0.56□□□□□ -2.5
PCNX1-208ENST00000554707 DEFB109BQ30KR1 87 aa-0.56□□□□□ -2.5
PCNX1-208ENST00000554707 PTPRMP28827 1452 aa-0.56□□□□□ -2.5
PCNX1-208ENST00000554707 PCLOQ9Y6V0 5065 aa-0.56□□□□□ -2.5
PCNX1-208ENST00000554707 NEBP20929 6669 aa-0.57□□□□□ -2.5
PCNX1-208ENST00000554707 A0A0D9SFI3 127 aa-0.57□□□□□ -2.5
PCNX1-208ENST00000554707 MAGOHBQ96A72 148 aaKnown RBP-0.57□□□□□ -2.5
PCNX1-208ENST00000554707 NDUFA12Q9UI09 145 aa-0.57□□□□□ -2.5
PCNX1-208ENST00000554707 SCP2D1Q9UJQ7 156 aa-0.57□□□□□ -2.5
PCNX1-208ENST00000554707 GINS2Q9Y248 185 aa-0.57□□□□□ -2.5
PCNX1-208ENST00000554707 HSPB11Q9Y547 144 aa-0.57□□□□□ -2.5
PCNX1-208ENST00000554707 M0R2P5 195 aa-0.58□□□□□ -2.5
PCNX1-208ENST00000554707 EDDM3BP56851 147 aa-0.58□□□□□ -2.5
PCNX1-208ENST00000554707 SELENOSQ9BQE4 189 aa-0.58□□□□□ -2.5
PCNX1-208ENST00000554707 DDA1Q9BW61 102 aa-0.58□□□□□ -2.5
PCNX1-208ENST00000554707 KMT2CQ8NEZ4 4911 aaKnown RBP-0.59□□□□□ -2.5
PCNX1-208ENST00000554707 LRP2P98164 4655 aa-0.59□□□□□ -2.5
PCNX1-208ENST00000554707 UHRF1BP1LA0JNW5 1464 aa-0.59□□□□□ -2.5
PCNX1-208ENST00000554707 CASZ1Q86V15 1759 aa-0.59□□□□□ -2.5
PCNX1-208ENST00000554707 TRAV1-2A0A0B4J238 106 aa-0.59□□□□□ -2.5
PCNX1-208ENST00000554707 A0A1B0GX51 115 aa-0.59□□□□□ -2.5
PCNX1-208ENST00000554707 M0R129 80 aa-0.59□□□□□ -2.5
PCNX1-208ENST00000554707 SCTP09683 121 aa-0.59□□□□□ -2.5
PCNX1-208ENST00000554707 WFDC2Q14508 124 aa-0.59□□□□□ -2.5
PCNX1-208ENST00000554707 LINC01545Q5VT33 79 aa-0.59□□□□□ -2.5
PCNX1-208ENST00000554707 MUC2Q02817 5179 aa-0.6□□□□□ -2.5
PCNX1-208ENST00000554707 ERCC6Q03468 1493 aa-0.6□□□□□ -2.5
PCNX1-208ENST00000554707 FAM92AA1XBS5 289 aa-0.6□□□□□ -2.51
PCNX1-208ENST00000554707 G3V318 75 aa-0.6□□□□□ -2.51
PCNX1-208ENST00000554707 SPINK8P0C7L1 97 aa-0.6□□□□□ -2.51
PCNX1-208ENST00000554707 NCS1P62166 190 aa-0.6□□□□□ -2.51
PCNX1-208ENST00000554707 RPL7L1Q6DKI1 246 aaKnown RBP-0.6□□□□□ -2.51
PCNX1-208ENST00000554707 PBRM1Q86U86 1689 aa-0.6□□□□□ -2.51
PCNX1-208ENST00000554707 TRAV22A0A0B4J277 110 aa-0.61□□□□□ -2.51
PCNX1-208ENST00000554707 A6NIN4 97 aa-0.61□□□□□ -2.51
PCNX1-208ENST00000554707 NEFHP12036 1026 aa-0.61□□□□□ -2.51
PCNX1-208ENST00000554707 SPAG11BQ08648 103 aa-0.61□□□□□ -2.51
PCNX1-208ENST00000554707 MIC13Q5XKP0 118 aa-0.61□□□□□ -2.51
PCNX1-208ENST00000554707 C10orf82Q8WW14 230 aa-0.61□□□□□ -2.51
PCNX1-208ENST00000554707 CNFNQ9BYD5 112 aa-0.61□□□□□ -2.51
PCNX1-208ENST00000554707 NPVFQ9HCQ7 196 aa-0.61□□□□□ -2.51
PCNX1-208ENST00000554707 RPRMQ9NS64 109 aa-0.61□□□□□ -2.51
PCNX1-208ENST00000554707 TRBV10-3A0A0K0K1G6 114 aa-0.62□□□□□ -2.51
PCNX1-208ENST00000554707 PIRTP0C851 137 aa-0.62□□□□□ -2.51
PCNX1-208ENST00000554707 CCDC153Q494R4 210 aa-0.62□□□□□ -2.51
PCNX1-208ENST00000554707 GOLGA3Q08378 1498 aa-0.62□□□□□ -2.51
PCNX1-208ENST00000554707 STAB1Q9NY15 2570 aa-0.62□□□□□ -2.51
PCNX1-208ENST00000554707 TRBV20-1A0A075B6N2 111 aa-0.63□□□□□ -2.51
PCNX1-208ENST00000554707 GNG14A0A1W2PPG7 69 aa-0.63□□□□□ -2.51
PCNX1-208ENST00000554707 SMIM6P0DI80 62 aa-0.63□□□□□ -2.51
PCNX1-208ENST00000554707 SPRR2DP22532 72 aa-0.63□□□□□ -2.51
PCNX1-208ENST00000554707 S100A5P33763 92 aa-0.63□□□□□ -2.51
PCNX1-208ENST00000554707 UBE2G1P62253 170 aa-0.63□□□□□ -2.51
PCNX1-208ENST00000554707 C9orf116Q5BN46 136 aaPredicted RBP-0.63□□□□□ -2.51
PCNX1-208ENST00000554707 WFDC6Q9BQY6 131 aa-0.63□□□□□ -2.51
PCNX1-208ENST00000554707 IBTKQ9P2D0 1353 aaPredicted RBP-0.63□□□□□ -2.51
PCNX1-208ENST00000554707 SYNJ1O43426 1573 aa-0.63□□□□□ -2.51
PCNX1-208ENST00000554707 KIF13AQ9H1H9 1805 aa-0.64□□□□□ -2.51
PCNX1-208ENST00000554707 NCOR1O75376 2440 aa-0.64□□□□□ -2.51
PCNX1-208ENST00000554707 DOCK11Q5JSL3 2073 aa-0.64□□□□□ -2.51
PCNX1-208ENST00000554707 ZNF142P52746 1687 aaPredicted RBP-0.64□□□□□ -2.51
PCNX1-208ENST00000554707 H0YJX3 145 aa-0.64□□□□□ -2.51
PCNX1-208ENST00000554707 NPFFO15130 113 aa-0.64□□□□□ -2.51
PCNX1-208ENST00000554707 SPANXN1Q5VSR9 72 aa-0.64□□□□□ -2.51
PCNX1-208ENST00000554707 VSTM2AQ8TAG5 236 aa-0.64□□□□□ -2.51
PCNX1-208ENST00000554707 CSMD3Q7Z407 3707 aa-0.64□□□□□ -2.51
PCNX1-208ENST00000554707 PTPRQQ9UMZ3 2332 aa-0.64□□□□□ -2.51
PCNX1-208ENST00000554707 PLXNA2O75051 1894 aa-0.65□□□□□ -2.51
PCNX1-208ENST00000554707 PRM1P04553 51 aa-0.65□□□□□ -2.51
PCNX1-208ENST00000554707 DBIP07108 87 aaKnown RBP-0.65□□□□□ -2.51
PCNX1-208ENST00000554707 KRTAP19-7Q3SYF9 63 aa-0.65□□□□□ -2.51
PCNX1-208ENST00000554707 CTAGE3PQ8IX95 158 aa-0.65□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms