RNA–Protein interactions for RNA: ENST00000494468.1

XPO1-223, Transcript of exportin 1, human

TSL 3

Gene XPO1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
XPO1-223	ENST00000494468	COMMD3	Q9UBI1	195 aa		0.28	□□□□□ -2.36
XPO1-223	ENST00000494468	TPRKB	Q9Y3C4	175 aa		0.28	□□□□□ -2.36
XPO1-223	ENST00000494468	FER1L6	Q2WGJ9	1857 aa		0.28	□□□□□ -2.36
XPO1-223	ENST00000494468	MYH1	P12882	1939 aa		0.28	□□□□□ -2.36
XPO1-223	ENST00000494468	CPS1	P31327	1500 aa		0.28	□□□□□ -2.37
XPO1-223	ENST00000494468	ABCA1	O95477	2261 aa		0.27	□□□□□ -2.37
XPO1-223	ENST00000494468	PKDREJ	Q9NTG1	2253 aa		0.27	□□□□□ -2.37
XPO1-223	ENST00000494468	ZC3H13	Q5T200	1668 aa	Known RBP	0.27	□□□□□ -2.37
XPO1-223	ENST00000494468	USP54	Q70EL1	1684 aa		0.27	□□□□□ -2.37
XPO1-223	ENST00000494468	CHD1	O14646	1710 aa		0.27	□□□□□ -2.37
XPO1-223	ENST00000494468	FAT2	Q9NYQ8	4349 aa		0.27	□□□□□ -2.37
XPO1-223	ENST00000494468	PGRMC1	O00264	195 aa	Known RBP	0.27	□□□□□ -2.37
XPO1-223	ENST00000494468	PFDN1	O60925	122 aa		0.27	□□□□□ -2.37
XPO1-223	ENST00000494468	NEFH	P12036	1026 aa		0.27	□□□□□ -2.37
XPO1-223	ENST00000494468	PDE6G	P18545	87 aa		0.27	□□□□□ -2.37
XPO1-223	ENST00000494468	S100A5	P33763	92 aa		0.27	□□□□□ -2.37
XPO1-223	ENST00000494468	SDC2	P34741	201 aa		0.27	□□□□□ -2.37
XPO1-223	ENST00000494468	LINC00305	Q7Z4B0	112 aa		0.27	□□□□□ -2.37
XPO1-223	ENST00000494468	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	0.27	□□□□□ -2.37
XPO1-223	ENST00000494468	OR4B1	Q8NGF8	309 aa		0.27	□□□□□ -2.37
XPO1-223	ENST00000494468	CCL19	Q99731	98 aa		0.27	□□□□□ -2.37
XPO1-223	ENST00000494468	NABP2	Q9BQ15	211 aa		0.27	□□□□□ -2.37
XPO1-223	ENST00000494468	LPAR5	Q9H1C0	372 aa		0.27	□□□□□ -2.37
XPO1-223	ENST00000494468	MRPL40	Q9NQ50	206 aa	Known RBP	0.27	□□□□□ -2.37
XPO1-223	ENST00000494468	ATPIF1	Q9UII2	106 aa		0.27	□□□□□ -2.37
XPO1-223	ENST00000494468	ANK3	Q12955	4377 aa	Known RBP	0.27	□□□□□ -2.37
XPO1-223	ENST00000494468	TCOF1	Q13428	1488 aa	Known RBP	0.27	□□□□□ -2.37
XPO1-223	ENST00000494468	DIP2B	Q9P265	1576 aa		0.27	□□□□□ -2.37
XPO1-223	ENST00000494468	CTTNBP2	Q8WZ74	1663 aa		0.27	□□□□□ -2.37
XPO1-223	ENST00000494468	AKAP9	Q99996	3911 aa		0.27	□□□□□ -2.37
XPO1-223	ENST00000494468	UNC13A	Q9UPW8	1703 aa		0.27	□□□□□ -2.37
XPO1-223	ENST00000494468	KIAA1549L	Q6ZVL6	1849 aa		0.27	□□□□□ -2.37
XPO1-223	ENST00000494468	LOC101927531	A0A1B0GV80	90 aa		0.26	□□□□□ -2.37
XPO1-223	ENST00000494468	IGHV3-30	P01768	117 aa		0.26	□□□□□ -2.37
XPO1-223	ENST00000494468	MT-ND4L	P03901	98 aa		0.26	□□□□□ -2.37
XPO1-223	ENST00000494468	IGHV3-30-5	P0DP03	117 aa		0.26	□□□□□ -2.37
XPO1-223	ENST00000494468	BCL2	P10415	239 aa		0.26	□□□□□ -2.37
XPO1-223	ENST00000494468	CCL4	P13236	92 aa		0.26	□□□□□ -2.37
XPO1-223	ENST00000494468	SPRR2D	P22532	72 aa		0.26	□□□□□ -2.37
XPO1-223	ENST00000494468	CRYGS	P22914	178 aa		0.26	□□□□□ -2.37
XPO1-223	ENST00000494468	RPS3	P23396	243 aa	Known RBP eCLIP	0.26	□□□□□ -2.37	3e-17	■■□□□ 13.5
XPO1-223	ENST00000494468	MT4	P47944	62 aa		0.26	□□□□□ -2.37
XPO1-223	ENST00000494468	SNRPD3	P62318	126 aa	Known RBP	0.26	□□□□□ -2.37
XPO1-223	ENST00000494468	ZNF56	Q15929	161 aa		0.26	□□□□□ -2.37
XPO1-223	ENST00000494468	C10orf111	Q8N326	155 aa		0.26	□□□□□ -2.37
XPO1-223	ENST00000494468	LINC00208	Q96KT6	92 aa		0.26	□□□□□ -2.37
XPO1-223	ENST00000494468	PRELID3A	Q96N28	172 aa		0.26	□□□□□ -2.37
XPO1-223	ENST00000494468	CENPH	Q9H3R5	247 aa		0.26	□□□□□ -2.37
XPO1-223	ENST00000494468	LAMTOR2	Q9Y2Q5	125 aa		0.26	□□□□□ -2.37
XPO1-223	ENST00000494468	MADD	Q8WXG6	1647 aa		0.26	□□□□□ -2.37
XPO1-223	ENST00000494468	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	0.26	□□□□□ -2.37
XPO1-223	ENST00000494468	HELZ	P42694	1942 aa	Known RBP	0.25	□□□□□ -2.37
XPO1-223	ENST00000494468	SPHKAP	Q2M3C7	1700 aa		0.25	□□□□□ -2.37
XPO1-223	ENST00000494468	BCORL1	Q5H9F3	1711 aa		0.25	□□□□□ -2.37
XPO1-223	ENST00000494468	CUL7	Q14999	1698 aa		0.25	□□□□□ -2.37
XPO1-223	ENST00000494468	FAM135B	Q49AJ0	1406 aa		0.25	□□□□□ -2.37
XPO1-223	ENST00000494468	FGD6	Q6ZV73	1430 aa		0.25	□□□□□ -2.37
XPO1-223	ENST00000494468	DSPP	Q9NZW4	1301 aa		0.25	□□□□□ -2.37
XPO1-223	ENST00000494468	FAM107A	O95990	144 aa		0.25	□□□□□ -2.37
XPO1-223	ENST00000494468	TRAC	P01848	142 aa		0.25	□□□□□ -2.37
XPO1-223	ENST00000494468	SAA1	P0DJI8	122 aa	Predicted RBP	0.25	□□□□□ -2.37
XPO1-223	ENST00000494468	SLC25A4	P12235	298 aa		0.25	□□□□□ -2.37
XPO1-223	ENST00000494468	SPRR2E	P22531	72 aa		0.25	□□□□□ -2.37
XPO1-223	ENST00000494468	SPRR2B	P35325	72 aa		0.25	□□□□□ -2.37
XPO1-223	ENST00000494468	SPRR2A	P35326	72 aa		0.25	□□□□□ -2.37
XPO1-223	ENST00000494468	ASIP	P42127	132 aa		0.25	□□□□□ -2.37
XPO1-223	ENST00000494468	NDUFA6	P56556	154 aa		0.25	□□□□□ -2.37
XPO1-223	ENST00000494468	IZUMO2	Q6UXV1	221 aa		0.25	□□□□□ -2.37
XPO1-223	ENST00000494468	OR51A4	Q8NGJ6	313 aa		0.25	□□□□□ -2.37
XPO1-223	ENST00000494468	OR5AK2	Q8NH90	309 aa		0.25	□□□□□ -2.37
XPO1-223	ENST00000494468	PLAC4	Q8WY50	150 aa		0.25	□□□□□ -2.37
XPO1-223	ENST00000494468	CCDC115	Q96NT0	180 aa		0.25	□□□□□ -2.37
XPO1-223	ENST00000494468	SELENOS	Q9BQE4	189 aa		0.25	□□□□□ -2.37
XPO1-223	ENST00000494468	CCDC32	Q9BV29	185 aa		0.25	□□□□□ -2.37
XPO1-223	ENST00000494468	SPANXA1	Q9NS26	97 aa		0.25	□□□□□ -2.37
XPO1-223	ENST00000494468	CBLN4	Q9NTU7	201 aa		0.25	□□□□□ -2.37
XPO1-223	ENST00000494468	SPANXC	Q9NY87	97 aa		0.25	□□□□□ -2.37
XPO1-223	ENST00000494468	SMPX	Q9UHP9	88 aa		0.25	□□□□□ -2.37
XPO1-223	ENST00000494468	MED31	Q9Y3C7	131 aa		0.25	□□□□□ -2.37
XPO1-223	ENST00000494468	LYST	Q99698	3801 aa		0.24	□□□□□ -2.37
XPO1-223	ENST00000494468	KIF21B	O75037	1637 aa		0.24	□□□□□ -2.37
XPO1-223	ENST00000494468	PREX2	Q70Z35	1606 aa		0.24	□□□□□ -2.37
XPO1-223	ENST00000494468	PLEC	Q15149	4684 aa	Known RBP	0.24	□□□□□ -2.37
XPO1-223	ENST00000494468	TNC	P24821	2201 aa		0.24	□□□□□ -2.37
XPO1-223	ENST00000494468	TRAV13-1	A0A0B4J241	112 aa		0.24	□□□□□ -2.37
XPO1-223	ENST00000494468	TRBV7-6	A0A0J9YX20	115 aa		0.24	□□□□□ -2.37
XPO1-223	ENST00000494468	TRBV27	A0A0K0K1C4	114 aa		0.24	□□□□□ -2.37
XPO1-223	ENST00000494468	LOC107984640	A0A0U1RRK4	108 aa		0.24	□□□□□ -2.37
XPO1-223	ENST00000494468		E7EQ34	232 aa		0.24	□□□□□ -2.37
XPO1-223	ENST00000494468		H0YJX3	145 aa		0.24	□□□□□ -2.37
XPO1-223	ENST00000494468		H3BMG7	143 aa		0.24	□□□□□ -2.37
XPO1-223	ENST00000494468		M0R129	80 aa		0.24	□□□□□ -2.37
XPO1-223	ENST00000494468	FXYD1	O00168	92 aa		0.24	□□□□□ -2.37
XPO1-223	ENST00000494468	EDF1	O60869	148 aa	Known RBP	0.24	□□□□□ -2.37
XPO1-223	ENST00000494468	IFNA21	P01568	189 aa		0.24	□□□□□ -2.37
XPO1-223	ENST00000494468	TCRA	P04437	139 aa		0.24	□□□□□ -2.37
XPO1-223	ENST00000494468	TPT1	P13693	172 aa	Known RBP	0.24	□□□□□ -2.37
XPO1-223	ENST00000494468	S100G	P29377	79 aa		0.24	□□□□□ -2.37
XPO1-223	ENST00000494468	SDC4	P31431	198 aa		0.24	□□□□□ -2.37
XPO1-223	ENST00000494468	SRP9	P49458	86 aa	Known RBP	0.24	□□□□□ -2.37

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