RNA–Protein interactions for RNA: ENST00000480032.4

SCN2A-205, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 1 (best)

Gene SCN2A, Length 11,676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-205ENST00000480032 IGKV1D-39P04432 117 aa3.25□□□□□ -1.89
SCN2A-205ENST00000480032 PKD1L2Q7Z442 2459 aa3.25□□□□□ -1.89
SCN2A-205ENST00000480032 Q6ZVQ6 151 aa3.25□□□□□ -1.89
SCN2A-205ENST00000480032 COX7A1P24310 79 aa3.25□□□□□ -1.89
SCN2A-205ENST00000480032 PLXND1Q9Y4D7 1925 aa3.25□□□□□ -1.89
SCN2A-205ENST00000480032 TRAV12-3A0A0B4J271 114 aa3.25□□□□□ -1.89
SCN2A-205ENST00000480032 RNF144BQ7Z419 303 aa3.25□□□□□ -1.89
SCN2A-205ENST00000480032 SIP14410 1827 aa3.25□□□□□ -1.89
SCN2A-205ENST00000480032 LOC100131303A0A0U1RQF7 123 aa3.25□□□□□ -1.89
SCN2A-205ENST00000480032 ZNF833PQ6ZTB9 187 aa3.25□□□□□ -1.89
SCN2A-205ENST00000480032 WFDC5Q8TCV5 224 aa3.25□□□□□ -1.89
SCN2A-205ENST00000480032 RETNLBQ9BQ08 111 aa3.25□□□□□ -1.89
SCN2A-205ENST00000480032 SMAD5-AS1Q9Y6J3 95 aa3.25□□□□□ -1.89
SCN2A-205ENST00000480032 IGHV1OR15-9A0A0B4J2B8 117 aa3.24□□□□□ -1.89
SCN2A-205ENST00000480032 CCKP06307 115 aa3.24□□□□□ -1.89
SCN2A-205ENST00000480032 PLXNA1Q9UIW2 1896 aa3.24□□□□□ -1.89
SCN2A-205ENST00000480032 C5orf63A6NC05 138 aa3.24□□□□□ -1.89
SCN2A-205ENST00000480032 TRIAP1O43715 76 aa3.24□□□□□ -1.89
SCN2A-205ENST00000480032 EFNA4P52798 201 aa3.24□□□□□ -1.89
SCN2A-205ENST00000480032 C16orf47Q6ZP98 133 aaPredicted RBP3.24□□□□□ -1.89
SCN2A-205ENST00000480032 C7orf69Q9H7B7 122 aa3.24□□□□□ -1.89
SCN2A-205ENST00000480032 HCG22E2RYF7 251 aa3.24□□□□□ -1.89
SCN2A-205ENST00000480032 FAM120AOSQ5T036 256 aa3.24□□□□□ -1.89
SCN2A-205ENST00000480032 Q8N7P7 452 aa3.24□□□□□ -1.89
SCN2A-205ENST00000480032 LINC01587Q99440 93 aa3.24□□□□□ -1.89
SCN2A-205ENST00000480032 KLK15Q9H2R5 256 aa3.24□□□□□ -1.89
SCN2A-205ENST00000480032 A6NED7 52 aa3.24□□□□□ -1.89
SCN2A-205ENST00000480032 SND1-IT1Q9HBX3 110 aa3.24□□□□□ -1.89
SCN2A-205ENST00000480032 MYOFQ9NZM1 2061 aa3.24□□□□□ -1.89
SCN2A-205ENST00000480032 PRYO14603 147 aa3.24□□□□□ -1.89
SCN2A-205ENST00000480032 CDSNQ15517 529 aa3.24□□□□□ -1.89
SCN2A-205ENST00000480032 SS18Q15532 418 aa3.24□□□□□ -1.89
SCN2A-205ENST00000480032 LINC01561Q8N1V8 128 aa3.24□□□□□ -1.89
SCN2A-205ENST00000480032 SPAARA0A1B0GVQ0 90 aa3.24□□□□□ -1.89
SCN2A-205ENST00000480032 AMELXQ99217 191 aa3.24□□□□□ -1.89
SCN2A-205ENST00000480032 IGKV3OR2-268A0A0C4DH90 116 aa3.24□□□□□ -1.89
SCN2A-205ENST00000480032 RNASE4P34096 147 aaKnown RBP3.24□□□□□ -1.89
SCN2A-205ENST00000480032 C3orf56Q8N813 242 aa3.24□□□□□ -1.89
SCN2A-205ENST00000480032 ZNF580Q9UK33 172 aa3.24□□□□□ -1.89
SCN2A-205ENST00000480032 USP9XQ93008 2570 aaPredicted RBP3.24□□□□□ -1.89
SCN2A-205ENST00000480032 MED13LQ71F56 2210 aa3.24□□□□□ -1.89
SCN2A-205ENST00000480032 ARID2Q68CP9 1835 aa3.24□□□□□ -1.89
SCN2A-205ENST00000480032 WISP1O95388 367 aa3.24□□□□□ -1.89
SCN2A-205ENST00000480032 IGHV3-30-3P0DP02 117 aa3.24□□□□□ -1.89
SCN2A-205ENST00000480032 KRTAP27-1Q3LI81 207 aa3.24□□□□□ -1.89
SCN2A-205ENST00000480032 FAM110DQ8TAY7 271 aaPredicted RBP3.24□□□□□ -1.89
SCN2A-205ENST00000480032 INSP01308 110 aa3.23□□□□□ -1.89
SCN2A-205ENST00000480032 POM121L12Q8N7R1 296 aa3.23□□□□□ -1.89
SCN2A-205ENST00000480032 MRPS12O15235 138 aaKnown RBP3.23□□□□□ -1.89
SCN2A-205ENST00000480032 IGLV2-8P01709 118 aa3.23□□□□□ -1.89
SCN2A-205ENST00000480032 C7orf65Q6ZTY9 151 aa3.23□□□□□ -1.89
SCN2A-205ENST00000480032 PLA2G2FQ9BZM2 168 aa3.23□□□□□ -1.89
SCN2A-205ENST00000480032 A0A0G2JRQ6 117 aa3.23□□□□□ -1.89
SCN2A-205ENST00000480032 TMEM178BH3BS89 294 aa3.23□□□□□ -1.89
SCN2A-205ENST00000480032 TRIP6Q15654 476 aaKnown RBP3.23□□□□□ -1.89
SCN2A-205ENST00000480032 MCRIP2Q9BUT9 160 aaKnown RBP3.23□□□□□ -1.89
SCN2A-205ENST00000480032 LYPD5Q6UWN5 251 aa3.23□□□□□ -1.89
SCN2A-205ENST00000480032 LINC00308Q8TCZ7 52 aa3.23□□□□□ -1.89
SCN2A-205ENST00000480032 USP9YO00507 2555 aaPredicted RBP3.23□□□□□ -1.89
SCN2A-205ENST00000480032 BRI3O95415 125 aa3.23□□□□□ -1.89
SCN2A-205ENST00000480032 COL4A6Q14031 1691 aa3.23□□□□□ -1.89
SCN2A-205ENST00000480032 ITLN1Q8WWA0 313 aa3.23□□□□□ -1.89
SCN2A-205ENST00000480032 LCA10Q71F78 164 aa3.23□□□□□ -1.89
SCN2A-205ENST00000480032 PLA2G2EQ9NZK7 142 aa3.23□□□□□ -1.89
SCN2A-205ENST00000480032 KLK5Q9Y337 293 aaPredicted RBP3.23□□□□□ -1.89
SCN2A-205ENST00000480032 WISP2O76076 250 aa3.23□□□□□ -1.89
SCN2A-205ENST00000480032 SPTSSBQ8NFR3 76 aa3.23□□□□□ -1.89
SCN2A-205ENST00000480032 HCSTQ9UBK5 93 aa3.23□□□□□ -1.89
SCN2A-205ENST00000480032 FER1L5A0AVI2 2057 aa3.23□□□□□ -1.89
SCN2A-205ENST00000480032 TRAV41A0A0B4J266 112 aa3.22□□□□□ -1.89
SCN2A-205ENST00000480032 BPY2O14599 106 aa3.22□□□□□ -1.89
SCN2A-205ENST00000480032 TMEM263Q8WUH6 116 aaKnown RBP3.22□□□□□ -1.89
SCN2A-205ENST00000480032 NOTCH2Q04721 2471 aa3.22□□□□□ -1.89
SCN2A-205ENST00000480032 CGB1A6NKQ9 187 aa3.22□□□□□ -1.89
SCN2A-205ENST00000480032 LHBP01229 141 aa3.22□□□□□ -1.89
SCN2A-205ENST00000480032 SPANXA2-OT1Q8N9U9 137 aa3.22□□□□□ -1.89
SCN2A-205ENST00000480032 SPRR3Q9UBC9 169 aa3.22□□□□□ -1.89
SCN2A-205ENST00000480032 EPOPA6NHQ4 379 aa3.22□□□□□ -1.89
SCN2A-205ENST00000480032 Q8N6K4 173 aa3.22□□□□□ -1.89
SCN2A-205ENST00000480032 ZNF491Q8N8L2 437 aa3.22□□□□□ -1.89
SCN2A-205ENST00000480032 WFDC9Q8NEX5 89 aa3.22□□□□□ -1.89
SCN2A-205ENST00000480032 TANC2Q9HCD6 1990 aa3.22□□□□□ -1.89
SCN2A-205ENST00000480032 IGKV1-27A0A075B6S5 117 aa3.22□□□□□ -1.89
SCN2A-205ENST00000480032 NDUFA4O00483 81 aa3.22□□□□□ -1.89
SCN2A-205ENST00000480032 APELAP0DMC3 54 aa3.22□□□□□ -1.89
SCN2A-205ENST00000480032 PMS2CLQ68D20 193 aa3.22□□□□□ -1.89
SCN2A-205ENST00000480032 TP53AIP1Q9HCN2 124 aa3.22□□□□□ -1.89
SCN2A-205ENST00000480032 TRBV6-8A0A0A6YYG3 113 aa3.22□□□□□ -1.89
SCN2A-205ENST00000480032 C4orf3Q8WVX3 66 aa3.22□□□□□ -1.89
SCN2A-205ENST00000480032 SDK2Q58EX2 2172 aa3.22□□□□□ -1.89
SCN2A-205ENST00000480032 LOC110117498A0A087WWA1 95 aa3.22□□□□□ -1.89
SCN2A-205ENST00000480032 PLXNB1O43157 2135 aa3.22□□□□□ -1.89
SCN2A-205ENST00000480032 C8orf87E5RJ46 101 aa3.22□□□□□ -1.89
SCN2A-205ENST00000480032 ARHGAP32A7KAX9 2087 aa3.22□□□□□ -1.89
SCN2A-205ENST00000480032 DEFB108AA8MXU0 73 aa3.22□□□□□ -1.89
SCN2A-205ENST00000480032 SMKR1H3BMG3 65 aa3.22□□□□□ -1.89
SCN2A-205ENST00000480032 C4orf26Q17RF5 130 aa3.22□□□□□ -1.89
SCN2A-205ENST00000480032 C17orf82Q86X59 251 aaPredicted RBP3.22□□□□□ -1.89
SCN2A-205ENST00000480032 DCANP1Q8TF63 244 aa3.22□□□□□ -1.89
SCN2A-205ENST00000480032 THSD7BQ9C0I4 1608 aa3.21□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms