RNA–Protein interactions for RNA: ENST00000478238.1

SYCP3-205, Transcript of synaptonemal complex protein 3, humanhuman

TSL 3

Gene SYCP3, Length 665 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-205ENST00000478238 APODP05090 189 aa-0.2□□□□□ -2.44
SYCP3-205ENST00000478238 HLA-DRB4P13762 266 aa-0.2□□□□□ -2.44
SYCP3-205ENST00000478238 ACYP2P14621 99 aa-0.2□□□□□ -2.44
SYCP3-205ENST00000478238 NPC2P61916 151 aa-0.2□□□□□ -2.44
SYCP3-205ENST00000478238 TFAMQ00059 246 aaKnown RBP-0.2□□□□□ -2.44
SYCP3-205ENST00000478238 OR8B8Q15620 311 aa-0.2□□□□□ -2.44
SYCP3-205ENST00000478238 CLLU1Q5K131 121 aa-0.2□□□□□ -2.44
SYCP3-205ENST00000478238 C4orf33Q8N1A6 199 aa-0.2□□□□□ -2.44
SYCP3-205ENST00000478238 C20orf197Q8N268 126 aa-0.2□□□□□ -2.44
SYCP3-205ENST00000478238 HLA-DRB4X5D2U9 266 aa-0.2□□□□□ -2.44
SYCP3-205ENST00000478238 TNXBP22105 4242 aa-0.2□□□□□ -2.44
SYCP3-205ENST00000478238 NSD1Q96L73 2696 aaPredicted RBP-0.2□□□□□ -2.44
SYCP3-205ENST00000478238 PLXNB2O15031 1838 aa-0.21□□□□□ -2.44
SYCP3-205ENST00000478238 TRAV36DV7A0A075B6V5 113 aa-0.21□□□□□ -2.44
SYCP3-205ENST00000478238 TRGV1A0A0A0MS02 117 aa-0.21□□□□□ -2.44
SYCP3-205ENST00000478238 TRAV2A0A0B4J234 112 aa-0.21□□□□□ -2.44
SYCP3-205ENST00000478238 C10orf142B7Z368 130 aa-0.21□□□□□ -2.44
SYCP3-205ENST00000478238 TNFSF15O95150 251 aa-0.21□□□□□ -2.44
SYCP3-205ENST00000478238 CFDP00746 253 aaPredicted RBP-0.21□□□□□ -2.44
SYCP3-205ENST00000478238 RBP4P02753 201 aa-0.21□□□□□ -2.44
SYCP3-205ENST00000478238 RPS28P62857 69 aaKnown RBP-0.21□□□□□ -2.44
SYCP3-205ENST00000478238 Q6ZRX8 168 aa-0.21□□□□□ -2.44
SYCP3-205ENST00000478238 ATP6V0E2Q8NHE4 81 aa-0.21□□□□□ -2.44
SYCP3-205ENST00000478238 COX7B2Q8TF08 81 aa-0.21□□□□□ -2.44
SYCP3-205ENST00000478238 TMEM242Q9NWH2 141 aa-0.21□□□□□ -2.44
SYCP3-205ENST00000478238 V9GYV3 84 aa-0.21□□□□□ -2.44
SYCP3-205ENST00000478238 SYNJ1O43426 1573 aa-0.21□□□□□ -2.44
SYCP3-205ENST00000478238 DOPEY2Q9Y3R5 2298 aa-0.21□□□□□ -2.44
SYCP3-205ENST00000478238 UHRF1BP1LA0JNW5 1464 aa-0.22□□□□□ -2.44
SYCP3-205ENST00000478238 WNK3Q9BYP7 1800 aa-0.22□□□□□ -2.44
SYCP3-205ENST00000478238 KIAA0100Q14667 2235 aaKnown RBP-0.22□□□□□ -2.44
SYCP3-205ENST00000478238 BORCS7-ASMTA0A0B4J1R7 106 aa-0.22□□□□□ -2.44
SYCP3-205ENST00000478238 TRAV12-3A0A0B4J271 114 aa-0.22□□□□□ -2.44
SYCP3-205ENST00000478238 ZNF815PA8K554 130 aa-0.22□□□□□ -2.44
SYCP3-205ENST00000478238 TSTD3H0UI37 97 aa-0.22□□□□□ -2.44
SYCP3-205ENST00000478238 J3QLW9 94 aa-0.22□□□□□ -2.44
SYCP3-205ENST00000478238 GCHFRP30047 84 aa-0.22□□□□□ -2.44
SYCP3-205ENST00000478238 CMPK1P30085 196 aa-0.22□□□□□ -2.44
SYCP3-205ENST00000478238 SSBP1Q04837 148 aaKnown RBP-0.22□□□□□ -2.44
SYCP3-205ENST00000478238 SPCS2Q15005 226 aa-0.22□□□□□ -2.44
SYCP3-205ENST00000478238 KRTAP6-1Q3LI64 71 aa-0.22□□□□□ -2.44
SYCP3-205ENST00000478238 FAM74A4Q5TZK3 123 aa-0.22□□□□□ -2.44
SYCP3-205ENST00000478238 SLC48A1Q6P1K1 146 aa-0.22□□□□□ -2.44
SYCP3-205ENST00000478238 ATP11AUNQ6ZP68 121 aa-0.22□□□□□ -2.44
SYCP3-205ENST00000478238 SSBP3-AS1Q7Z2R9 100 aa-0.22□□□□□ -2.44
SYCP3-205ENST00000478238 SMIM15Q7Z3B0 74 aa-0.22□□□□□ -2.44
SYCP3-205ENST00000478238 NDUFA11Q86Y39 141 aa-0.22□□□□□ -2.44
SYCP3-205ENST00000478238 TCTE3Q8IZS6 198 aa-0.22□□□□□ -2.44
SYCP3-205ENST00000478238 SKA2Q8WVK7 121 aaPredicted RBP-0.22□□□□□ -2.44
SYCP3-205ENST00000478238 DDA1Q9BW61 102 aa-0.22□□□□□ -2.44
SYCP3-205ENST00000478238 ERG28Q9UKR5 140 aa-0.22□□□□□ -2.44
SYCP3-205ENST00000478238 HIGD1AQ9Y241 93 aa-0.22□□□□□ -2.44
SYCP3-205ENST00000478238 GINS2Q9Y248 185 aa-0.22□□□□□ -2.44
SYCP3-205ENST00000478238 LSM2Q9Y333 95 aaKnown RBP-0.22□□□□□ -2.44
SYCP3-205ENST00000478238 IFT172Q9UG01 1749 aa-0.22□□□□□ -2.44
SYCP3-205ENST00000478238 ERCC6Q03468 1493 aa-0.22□□□□□ -2.45
SYCP3-205ENST00000478238 GOLGA3Q08378 1498 aa-0.22□□□□□ -2.45
SYCP3-205ENST00000478238 PTPRQQ9UMZ3 2332 aa-0.22□□□□□ -2.45
SYCP3-205ENST00000478238 ZANQ9Y493 2812 aa-0.23□□□□□ -2.45
SYCP3-205ENST00000478238 BIVM-ERCC5R4GMW8 1640 aa-0.23□□□□□ -2.45
SYCP3-205ENST00000478238 A0A1B0GX51 115 aa-0.23□□□□□ -2.45
SYCP3-205ENST00000478238 TMEM14DPA8MWL7 114 aa-0.23□□□□□ -2.45
SYCP3-205ENST00000478238 M0R2P5 195 aa-0.23□□□□□ -2.45
SYCP3-205ENST00000478238 DEGS1O15121 323 aa-0.23□□□□□ -2.45
SYCP3-205ENST00000478238 SCTP09683 121 aa-0.23□□□□□ -2.45
SYCP3-205ENST00000478238 S100A5P33763 92 aa-0.23□□□□□ -2.45
SYCP3-205ENST00000478238 INSL4Q14641 139 aa-0.23□□□□□ -2.45
SYCP3-205ENST00000478238 UBE2DNLQ8IWF7 75 aa-0.23□□□□□ -2.45
SYCP3-205ENST00000478238 SELENOSQ9BQE4 189 aa-0.23□□□□□ -2.45
SYCP3-205ENST00000478238 HSPB11Q9Y547 144 aa-0.23□□□□□ -2.45
SYCP3-205ENST00000478238 VWFP04275 2813 aa-0.23□□□□□ -2.45
SYCP3-205ENST00000478238 SPEF2Q9C093 1822 aa-0.23□□□□□ -2.45
SYCP3-205ENST00000478238 DCHS2Q6V1P9 2916 aa-0.23□□□□□ -2.45
SYCP3-205ENST00000478238 ARAP1Q96P48 1450 aa-0.23□□□□□ -2.45
SYCP3-205ENST00000478238 NHSL1Q5SYE7 1610 aa-0.24□□□□□ -2.45
SYCP3-205ENST00000478238 CCDC179H3BU77 68 aa-0.24□□□□□ -2.45
SYCP3-205ENST00000478238 M0R129 80 aa-0.24□□□□□ -2.45
SYCP3-205ENST00000478238 YPEL1O60688 119 aa-0.24□□□□□ -2.45
SYCP3-205ENST00000478238 LINC01545Q5VT33 79 aa-0.24□□□□□ -2.45
SYCP3-205ENST00000478238 C10orf82Q8WW14 230 aa-0.24□□□□□ -2.45
SYCP3-205ENST00000478238 MAGOHBQ96A72 148 aaKnown RBP-0.24□□□□□ -2.45
SYCP3-205ENST00000478238 NDUFA12Q9UI09 145 aa-0.24□□□□□ -2.45
SYCP3-205ENST00000478238 PPRC1Q5VV67 1664 aaKnown RBP-0.24□□□□□ -2.45
SYCP3-205ENST00000478238 KMT2AQ03164 3969 aa-0.24□□□□□ -2.45
SYCP3-205ENST00000478238 HECTD4Q9Y4D8 3996 aa-0.24□□□□□ -2.45
SYCP3-205ENST00000478238 PLCE1Q9P212 2302 aa-0.25□□□□□ -2.45
SYCP3-205ENST00000478238 TRAV1-2A0A0B4J238 106 aa-0.25□□□□□ -2.45
SYCP3-205ENST00000478238 GNG14A0A1W2PPG7 69 aa-0.25□□□□□ -2.45
SYCP3-205ENST00000478238 G3V318 75 aa-0.25□□□□□ -2.45
SYCP3-205ENST00000478238 H0YJX3 145 aa-0.25□□□□□ -2.45
SYCP3-205ENST00000478238 M0R3E3 92 aa-0.25□□□□□ -2.45
SYCP3-205ENST00000478238 NBEAP1P0C6P0 100 aa-0.25□□□□□ -2.45
SYCP3-205ENST00000478238 NEFHP12036 1026 aa-0.25□□□□□ -2.45
SYCP3-205ENST00000478238 EDDM3BP56851 147 aa-0.25□□□□□ -2.45
SYCP3-205ENST00000478238 NCS1P62166 190 aa-0.25□□□□□ -2.45
SYCP3-205ENST00000478238 CCDC153Q494R4 210 aa-0.25□□□□□ -2.45
SYCP3-205ENST00000478238 MIC13Q5XKP0 118 aa-0.25□□□□□ -2.45
SYCP3-205ENST00000478238 CYP4F30PQ9H0H9 118 aa-0.25□□□□□ -2.45
SYCP3-205ENST00000478238 BATF3Q9NR55 127 aa-0.25□□□□□ -2.45
SYCP3-205ENST00000478238 PRO0255Q9UI72 69 aa-0.25□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms