RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 MUC22E2RYF6 1773 aaPredicted RBP3.15□□□□□ -1.91
NUP58-209ENST00000476553 PTPRFP10586 1907 aa3.15□□□□□ -1.91
NUP58-209ENST00000476553 HEATR5BQ9P2D3 2071 aa3.15□□□□□ -1.91
NUP58-209ENST00000476553 COL4A5P29400 1685 aa3.14□□□□□ -1.91
NUP58-209ENST00000476553 DISP1Q96F81 1524 aa3.14□□□□□ -1.91
NUP58-209ENST00000476553 CHD3Q12873 2000 aaKnown RBP3.14□□□□□ -1.91
NUP58-209ENST00000476553 TNS1Q9HBL0 1735 aaKnown RBP3.14□□□□□ -1.91
NUP58-209ENST00000476553 A0A0G2JQZ4 141 aa3.14□□□□□ -1.91
NUP58-209ENST00000476553 SMIM31A0A1B0GVY4 71 aa3.14□□□□□ -1.91
NUP58-209ENST00000476553 TMEM30CPA0ZSE6 113 aa3.14□□□□□ -1.91
NUP58-209ENST00000476553 CYB5AP00167 134 aa3.14□□□□□ -1.91
NUP58-209ENST00000476553 MYOZ3Q8TDC0 251 aa3.14□□□□□ -1.91
NUP58-209ENST00000476553 S100A13Q99584 98 aa3.14□□□□□ -1.91
NUP58-209ENST00000476553 LINC00474Q9P2X8 69 aa3.14□□□□□ -1.91
NUP58-209ENST00000476553 C22orf24Q9Y442 160 aa3.14□□□□□ -1.91
NUP58-209ENST00000476553 PPLO60437 1756 aa3.14□□□□□ -1.91
NUP58-209ENST00000476553 ARHGEF12Q9NZN5 1544 aa3.14□□□□□ -1.91
NUP58-209ENST00000476553 MYH8P13535 1937 aa3.13□□□□□ -1.91
NUP58-209ENST00000476553 SEC16AO15027 2179 aa3.13□□□□□ -1.91
NUP58-209ENST00000476553 TRAV13-2A0A0B4J235 113 aa3.13□□□□□ -1.91
NUP58-209ENST00000476553 LRCOL1A6NCL2 159 aa3.13□□□□□ -1.91
NUP58-209ENST00000476553 NAP1L6A6NFF2 107 aa3.13□□□□□ -1.91
NUP58-209ENST00000476553 HCG22E2RYF7 251 aa3.13□□□□□ -1.91
NUP58-209ENST00000476553 NUPR1O60356 82 aa3.13□□□□□ -1.91
NUP58-209ENST00000476553 GNG11P61952 73 aa3.13□□□□□ -1.91
NUP58-209ENST00000476553 CCL8P80075 99 aa3.13□□□□□ -1.91
NUP58-209ENST00000476553 TPRXLQ17RH7 258 aa3.13□□□□□ -1.91
NUP58-209ENST00000476553 TDRG1Q3Y452 100 aa3.13□□□□□ -1.91
NUP58-209ENST00000476553 NDUFA11Q86Y39 141 aa3.13□□□□□ -1.91
NUP58-209ENST00000476553 LINC00052Q96N35 136 aa3.13□□□□□ -1.91
NUP58-209ENST00000476553 CYP4F30PQ9H0H9 118 aa3.13□□□□□ -1.91
NUP58-209ENST00000476553 GOLGA3Q08378 1498 aa3.13□□□□□ -1.91
NUP58-209ENST00000476553 CCDC141Q6ZP82 1450 aa3.13□□□□□ -1.91
NUP58-209ENST00000476553 MON2Q7Z3U7 1717 aa3.13□□□□□ -1.91
NUP58-209ENST00000476553 PCNX2A6NKB5 2137 aa3.13□□□□□ -1.91
NUP58-209ENST00000476553 MRPS14O60783 128 aaKnown RBP3.12□□□□□ -1.91
NUP58-209ENST00000476553 LYPD5Q6UWN5 251 aa3.12□□□□□ -1.91
NUP58-209ENST00000476553 ZNF720Q7Z2F6 126 aa3.12□□□□□ -1.91
NUP58-209ENST00000476553 MGST2Q99735 147 aa3.12□□□□□ -1.91
NUP58-209ENST00000476553 C20orf78Q9BR46 151 aa3.12□□□□□ -1.91
NUP58-209ENST00000476553 ORMDL1Q9P0S3 153 aa3.12□□□□□ -1.91
NUP58-209ENST00000476553 MICAL3Q7RTP6 2002 aa3.12□□□□□ -1.91
NUP58-209ENST00000476553 COL1A2P08123 1366 aa3.12□□□□□ -1.91
NUP58-209ENST00000476553 RGPD4Q7Z3J3 1758 aa3.11□□□□□ -1.91
NUP58-209ENST00000476553 SFT2D2O95562 160 aa3.11□□□□□ -1.91
NUP58-209ENST00000476553 IGLV6-57P01721 117 aa3.11□□□□□ -1.91
NUP58-209ENST00000476553 FAUP35544 74 aaKnown RBP3.11□□□□□ -1.91
NUP58-209ENST00000476553 SEC11AP67812 179 aa3.11□□□□□ -1.91
NUP58-209ENST00000476553 KRTAP13-2Q52LG2 175 aa3.11□□□□□ -1.91
NUP58-209ENST00000476553 S100A16Q96FQ6 103 aaKnown RBP3.11□□□□□ -1.91
NUP58-209ENST00000476553 CDC42SE1Q9NRR8 79 aa3.11□□□□□ -1.91
NUP58-209ENST00000476553 KDM6BO15054 1643 aa3.11□□□□□ -1.91
NUP58-209ENST00000476553 PXDNQ92626 1479 aa3.1□□□□□ -1.91
NUP58-209ENST00000476553 PATJQ8NI35 1801 aa3.1□□□□□ -1.91
NUP58-209ENST00000476553 IGLC7A0M8Q6 106 aa3.1□□□□□ -1.91
NUP58-209ENST00000476553 CCL16O15467 120 aa3.1□□□□□ -1.91
NUP58-209ENST00000476553 TFF1P04155 84 aa3.1□□□□□ -1.91
NUP58-209ENST00000476553 RNASE2P10153 161 aaKnown RBP3.1□□□□□ -1.91
NUP58-209ENST00000476553 CSAG1Q6PB30 78 aa3.1□□□□□ -1.91
NUP58-209ENST00000476553 SPACA4Q8TDM5 124 aa3.1□□□□□ -1.91
NUP58-209ENST00000476553 PATE1Q8WXA2 126 aa3.1□□□□□ -1.91
NUP58-209ENST00000476553 UQCR10Q9UDW1 63 aa3.1□□□□□ -1.91
NUP58-209ENST00000476553 SNRNP200O75643 2136 aaKnown RBP3.1□□□□□ -1.91
NUP58-209ENST00000476553 CCDC88BA6NC98 1476 aa3.09□□□□□ -1.91
NUP58-209ENST00000476553 CDK12Q9NYV4 1490 aaPredicted RBP3.09□□□□□ -1.91
NUP58-209ENST00000476553 NINQ8N4C6 2090 aa3.09□□□□□ -1.91
NUP58-209ENST00000476553 TET3O43151 1660 aa3.09□□□□□ -1.91
NUP58-209ENST00000476553 TRBV10-1A0A0K0K1A3 114 aa3.09□□□□□ -1.91
NUP58-209ENST00000476553 SIX6O95475 246 aa3.09□□□□□ -1.91
NUP58-209ENST00000476553 NUMA1Q14980 2115 aa3.09□□□□□ -1.91
NUP58-209ENST00000476553 ALKAL2Q6UX46 152 aa3.09□□□□□ -1.91
NUP58-209ENST00000476553 FAM213BQ8TBF2 198 aa3.09□□□□□ -1.91
NUP58-209ENST00000476553 IFI27L1Q96BM0 104 aa3.09□□□□□ -1.91
NUP58-209ENST00000476553 CYTL1Q9NRR1 136 aa3.09□□□□□ -1.91
NUP58-209ENST00000476553 RABAC1Q9UI14 185 aa3.09□□□□□ -1.91
NUP58-209ENST00000476553 PLIN4Q96Q06 1357 aa3.09□□□□□ -1.92
NUP58-209ENST00000476553 NWD2Q9ULI1 1742 aa3.08□□□□□ -1.92
NUP58-209ENST00000476553 KIF20BQ96Q89 1820 aa3.08□□□□□ -1.92
NUP58-209ENST00000476553 TRBV6-8A0A0A6YYG3 113 aa3.08□□□□□ -1.92
NUP58-209ENST00000476553 TRBV7-1A0A0A6YYK4 115 aa3.08□□□□□ -1.92
NUP58-209ENST00000476553 TRAV12-3A0A0B4J271 114 aa3.08□□□□□ -1.92
NUP58-209ENST00000476553 CRYM-AS1A6NIL9 109 aa3.08□□□□□ -1.92
NUP58-209ENST00000476553 SERP2Q8N6R1 65 aa3.08□□□□□ -1.92
NUP58-209ENST00000476553 DMAC1Q96GE9 116 aa3.08□□□□□ -1.92
NUP58-209ENST00000476553 TRGV9Q99603 122 aa3.08□□□□□ -1.92
NUP58-209ENST00000476553 ZFHX2Q9C0A1 2572 aaPredicted RBP3.08□□□□□ -1.92
NUP58-209ENST00000476553 SHANK2Q9UPX8 1470 aa3.08□□□□□ -1.92
NUP58-209ENST00000476553 LRRIQ1Q96JM4 1722 aa3.07□□□□□ -1.92
NUP58-209ENST00000476553 PTPRDP23468 1912 aa3.07□□□□□ -1.92
NUP58-209ENST00000476553 A0A0J9YY99 117 aa3.07□□□□□ -1.92
NUP58-209ENST00000476553 A0A1W2PNN7 141 aa3.07□□□□□ -1.92
NUP58-209ENST00000476553 H3BRM9 83 aa3.07□□□□□ -1.92
NUP58-209ENST00000476553 NDUFC1O43677 76 aa3.07□□□□□ -1.92
NUP58-209ENST00000476553 MPV17LQ2QL34 196 aa3.07□□□□□ -1.92
NUP58-209ENST00000476553 PRR9Q5T870 116 aa3.07□□□□□ -1.92
NUP58-209ENST00000476553 LINC00299Q6ZSB3 139 aa3.07□□□□□ -1.92
NUP58-209ENST00000476553 CACFD1Q9UGQ2 172 aa3.07□□□□□ -1.92
NUP58-209ENST00000476553 RP1P56715 2156 aa3.07□□□□□ -1.92
NUP58-209ENST00000476553 NUPR2A6NF83 97 aa3.06□□□□□ -1.92
NUP58-209ENST00000476553 RGPD3A6NKT7 1758 aaPredicted RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms