RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 PDZD2O15018 2839 aa9.36□□□□□ -0.91
RNF220-211ENST00000474956 NDUFA4O00483 81 aa9.36□□□□□ -0.91
RNF220-211ENST00000474956 RRN3P1Q2M238 152 aa9.36□□□□□ -0.91
RNF220-211ENST00000474956 CHTOPQ9Y3Y2 248 aaKnown RBP9.36□□□□□ -0.91
RNF220-211ENST00000474956 MUC4Q99102 2169 aa9.36□□□□□ -0.91
RNF220-211ENST00000474956 SLC25A16P16260 332 aa9.36□□□□□ -0.91
RNF220-211ENST00000474956 AZU1P20160 251 aa9.36□□□□□ -0.91
RNF220-211ENST00000474956 MYMXA0A1B0GTQ4 84 aa9.35□□□□□ -0.91
RNF220-211ENST00000474956 A0A1B0GWB2 263 aa9.35□□□□□ -0.91
RNF220-211ENST00000474956 GAGE12HA6NDE8 117 aa9.35□□□□□ -0.91
RNF220-211ENST00000474956 GTSF1LQ9H1H1 148 aa9.35□□□□□ -0.91
RNF220-211ENST00000474956 GAGE13Q4V321 117 aa9.35□□□□□ -0.91
RNF220-211ENST00000474956 ZFAND2AQ8N6M9 145 aa9.35□□□□□ -0.91
RNF220-211ENST00000474956 SCGB3A1Q96QR1 104 aa9.35□□□□□ -0.91
RNF220-211ENST00000474956 LENEPQ9Y5L5 61 aa9.35□□□□□ -0.91
RNF220-211ENST00000474956 TSSC4Q9Y5U2 329 aaPredicted RBP9.35□□□□□ -0.91
RNF220-211ENST00000474956 NOTCH3Q9UM47 2321 aa9.35□□□□□ -0.91
RNF220-211ENST00000474956 TOMM6Q96B49 74 aa9.34□□□□□ -0.91
RNF220-211ENST00000474956 IGKV3-20P01619 116 aa9.34□□□□□ -0.91
RNF220-211ENST00000474956 SUMO2P61956 95 aaKnown RBP9.34□□□□□ -0.91
RNF220-211ENST00000474956 ETDBQ3ZM63 59 aa9.34□□□□□ -0.91
RNF220-211ENST00000474956 JMJD1CQ15652 2540 aa9.34□□□□□ -0.91
RNF220-211ENST00000474956 IGHV4-31P0DP07 118 aa9.34□□□□□ -0.91
RNF220-211ENST00000474956 PSMB8P28062 276 aa9.34□□□□□ -0.91
RNF220-211ENST00000474956 RNASE4P34096 147 aaKnown RBP9.34□□□□□ -0.91
RNF220-211ENST00000474956 DEFB136Q30KP8 78 aa9.34□□□□□ -0.91
RNF220-211ENST00000474956 C20orf78Q9BR46 151 aa9.34□□□□□ -0.91
RNF220-211ENST00000474956 GNRH2O43555 120 aa9.33□□□□□ -0.92
RNF220-211ENST00000474956 AMTNQ6UX39 209 aa9.33□□□□□ -0.92
RNF220-211ENST00000474956 NEXN-AS1Q8NBZ9 246 aa9.33□□□□□ -0.92
RNF220-211ENST00000474956 USMG5Q96IX5 58 aa9.33□□□□□ -0.92
RNF220-211ENST00000474956 DUX3Q96PT4 197 aa9.33□□□□□ -0.92
RNF220-211ENST00000474956 HECTD1Q9ULT8 2610 aa9.33□□□□□ -0.92
RNF220-211ENST00000474956 HOXA3O43365 443 aaPredicted RBP9.33□□□□□ -0.92
RNF220-211ENST00000474956 SH2D6Q7Z4S9 175 aa9.33□□□□□ -0.92
RNF220-211ENST00000474956 SPATA25Q9BR10 227 aa9.33□□□□□ -0.92
RNF220-211ENST00000474956 M0R381 172 aa9.33□□□□□ -0.92
RNF220-211ENST00000474956 SMAGPQ0VAQ4 97 aa9.33□□□□□ -0.92
RNF220-211ENST00000474956 SPAG8Q99932 426 aaPredicted RBP9.33□□□□□ -0.92
RNF220-211ENST00000474956 C9orf139Q6ZV77 190 aa9.32□□□□□ -0.92
RNF220-211ENST00000474956 PRO0461Q9UI25 63 aa9.32□□□□□ -0.92
RNF220-211ENST00000474956 CYSLTR1Q9Y271 337 aa9.32□□□□□ -0.92
RNF220-211ENST00000474956 GCN1Q92616 2671 aaKnown RBP9.32□□□□□ -0.92
RNF220-211ENST00000474956 RASL10AQ92737 203 aa9.32□□□□□ -0.92
RNF220-211ENST00000474956 Q96MF0 132 aa9.32□□□□□ -0.92
RNF220-211ENST00000474956 DPH3P1Q9H4G8 78 aa9.32□□□□□ -0.92
RNF220-211ENST00000474956 DAZ1Q9NQZ3 744 aaKnown RBP9.32□□□□□ -0.92
RNF220-211ENST00000474956 NOTCH2Q04721 2471 aa9.32□□□□□ -0.92
RNF220-211ENST00000474956 FASNP49327 2511 aaKnown RBP9.31□□□□□ -0.92
RNF220-211ENST00000474956 LGALS1P09382 135 aaKnown RBP9.31□□□□□ -0.92
RNF220-211ENST00000474956 ZNF688P0C7X2 276 aa9.31□□□□□ -0.92
RNF220-211ENST00000474956 SYNJ2BPP57105 145 aa9.31□□□□□ -0.92
RNF220-211ENST00000474956 SCGB2A2Q13296 93 aa9.31□□□□□ -0.92
RNF220-211ENST00000474956 ANXA2RQ3ZCQ2 193 aa9.31□□□□□ -0.92
RNF220-211ENST00000474956 LINC00477Q96M19 166 aa9.31□□□□□ -0.92
RNF220-211ENST00000474956 S100A4P26447 101 aaKnown RBP9.31□□□□□ -0.92
RNF220-211ENST00000474956 UNC79Q9P2D8 2635 aa9.3□□□□□ -0.92
RNF220-211ENST00000474956 TRAV21A0A0B4J279 112 aa9.3□□□□□ -0.92
RNF220-211ENST00000474956 TMEM238LA0A1B0GVL6 79 aa9.3□□□□□ -0.92
RNF220-211ENST00000474956 A6NJY4 79 aa9.3□□□□□ -0.92
RNF220-211ENST00000474956 MORN3Q6PF18 240 aaPredicted RBP9.3□□□□□ -0.92
RNF220-211ENST00000474956 C2orf66Q6UXQ4 117 aa9.3□□□□□ -0.92
RNF220-211ENST00000474956 BAALCQ8WXS3 180 aa9.3□□□□□ -0.92
RNF220-211ENST00000474956 SETXQ7Z333 2677 aaKnown RBP9.3□□□□□ -0.92
RNF220-211ENST00000474956 IGHV4OR15-8A0A075B7B6 117 aa9.3□□□□□ -0.92
RNF220-211ENST00000474956 A0A087WW49 117 aa9.3□□□□□ -0.92
RNF220-211ENST00000474956 CFAP161Q6P656 301 aa9.3□□□□□ -0.92
RNF220-211ENST00000474956 OR10J6PQ8NGY7 276 aa9.3□□□□□ -0.92
RNF220-211ENST00000474956 ATP6V0BQ99437 205 aa9.3□□□□□ -0.92
RNF220-211ENST00000474956 PRADC1Q9BSG0 188 aa9.3□□□□□ -0.92
RNF220-211ENST00000474956 TRAV12-2A0A075B6T6 113 aa9.3□□□□□ -0.92
RNF220-211ENST00000474956 PHLDA3Q9Y5J5 127 aa9.3□□□□□ -0.92
RNF220-211ENST00000474956 PPP1R17O96001 155 aa9.29□□□□□ -0.92
RNF220-211ENST00000474956 ASIPP42127 132 aa9.29□□□□□ -0.92
RNF220-211ENST00000474956 DSCR9P59020 149 aa9.29□□□□□ -0.92
RNF220-211ENST00000474956 KRTAP1-3Q8IUG1 177 aa9.29□□□□□ -0.92
RNF220-211ENST00000474956 C14orf178Q8N769 122 aaPredicted RBP9.29□□□□□ -0.92
RNF220-211ENST00000474956 DCANP1Q8TF63 244 aa9.29□□□□□ -0.92
RNF220-211ENST00000474956 RPL39LQ96EH5 51 aaKnown RBP9.29□□□□□ -0.92
RNF220-211ENST00000474956 JPT2Q9H910 190 aa9.29□□□□□ -0.92
RNF220-211ENST00000474956 ZNF702PQ9H963 129 aa9.29□□□□□ -0.92
RNF220-211ENST00000474956 PGPEP1Q9NXJ5 209 aa9.29□□□□□ -0.92
RNF220-211ENST00000474956 PRSS29PA6NIE9 313 aa9.29□□□□□ -0.92
RNF220-211ENST00000474956 H3BUA1 57 aa9.29□□□□□ -0.92
RNF220-211ENST00000474956 MTURNQ8N3F0 131 aa9.29□□□□□ -0.92
RNF220-211ENST00000474956 ZNF815PA8K554 130 aa9.28□□□□□ -0.92
RNF220-211ENST00000474956 MED14OSP0DP75 135 aa9.28□□□□□ -0.92
RNF220-211ENST00000474956 MRPL16Q9NX20 251 aaKnown RBP9.28□□□□□ -0.92
RNF220-211ENST00000474956 OVOL1O14753 267 aa9.28□□□□□ -0.92
RNF220-211ENST00000474956 DEFB113Q30KQ7 82 aa9.28□□□□□ -0.92
RNF220-211ENST00000474956 SCGB1D4Q6XE38 83 aa9.28□□□□□ -0.92
RNF220-211ENST00000474956 WFDC11Q8NEX6 87 aa9.28□□□□□ -0.92
RNF220-211ENST00000474956 VPREB3Q9UKI3 123 aa9.28□□□□□ -0.92
RNF220-211ENST00000474956 GATA3P23771 443 aa9.28□□□□□ -0.92
RNF220-211ENST00000474956 DLX4Q92988 240 aaPredicted RBP9.28□□□□□ -0.92
RNF220-211ENST00000474956 MGPP08493 103 aa9.27□□□□□ -0.93
RNF220-211ENST00000474956 ANK3Q12955 4377 aaKnown RBP9.27□□□□□ -0.93
RNF220-211ENST00000474956 A0A1B0GV72 72 aa9.27□□□□□ -0.93
RNF220-211ENST00000474956 APOMO95445 188 aa9.27□□□□□ -0.93
RNF220-211ENST00000474956 PRM2P04554 102 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms