RNA–Protein interactions for RNA: ENST00000472673.5

COMMD3-211, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 237 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-211ENST00000472673 TMEM244Q5VVB8 128 aa-0.41□□□□□ -2.48
COMMD3-211ENST00000472673 TMEM91Q6ZNR0 172 aa-0.41□□□□□ -2.48
COMMD3-211ENST00000472673 OR8I2Q8N0Y5 310 aa-0.41□□□□□ -2.48
COMMD3-211ENST00000472673 Q96NJ1 140 aa-0.41□□□□□ -2.48
COMMD3-211ENST00000472673 BANF2Q9H503 90 aa-0.41□□□□□ -2.48
COMMD3-211ENST00000472673 TMEM242Q9NWH2 141 aa-0.41□□□□□ -2.48
COMMD3-211ENST00000472673 SMPXQ9UHP9 88 aa-0.41□□□□□ -2.48
COMMD3-211ENST00000472673 NOP16Q9Y3C1 178 aaKnown RBP-0.41□□□□□ -2.48
COMMD3-211ENST00000472673 PBRM1Q86U86 1689 aa-0.41□□□□□ -2.48
COMMD3-211ENST00000472673 CCDC171Q6TFL3 1326 aa-0.41□□□□□ -2.48
COMMD3-211ENST00000472673 HECTD4Q9Y4D8 3996 aa-0.41□□□□□ -2.48
COMMD3-211ENST00000472673 XIRP1Q702N8 1843 aaKnown RBP-0.42□□□□□ -2.48
COMMD3-211ENST00000472673 TNXBP22105 4242 aa-0.42□□□□□ -2.48
COMMD3-211ENST00000472673 TRBV7-1A0A0A6YYK4 115 aa-0.42□□□□□ -2.48
COMMD3-211ENST00000472673 J3KT08 172 aa-0.42□□□□□ -2.48
COMMD3-211ENST00000472673 ACYP2P14621 99 aa-0.42□□□□□ -2.48
COMMD3-211ENST00000472673 OR8B8Q15620 311 aa-0.42□□□□□ -2.48
COMMD3-211ENST00000472673 CLLU1Q5K131 121 aa-0.42□□□□□ -2.48
COMMD3-211ENST00000472673 TOMM20LQ6UXN7 152 aa-0.42□□□□□ -2.48
COMMD3-211ENST00000472673 C20orf197Q8N268 126 aa-0.42□□□□□ -2.48
COMMD3-211ENST00000472673 DYNLRB2Q8TF09 96 aa-0.42□□□□□ -2.48
COMMD3-211ENST00000472673 PKDREJQ9NTG1 2253 aa-0.42□□□□□ -2.48
COMMD3-211ENST00000472673 PTPRMP28827 1452 aa-0.42□□□□□ -2.48
COMMD3-211ENST00000472673 PDZD2O15018 2839 aa-0.42□□□□□ -2.48
COMMD3-211ENST00000472673 FAT2Q9NYQ8 4349 aa-0.43□□□□□ -2.48
COMMD3-211ENST00000472673 SMIM24O75264 130 aa-0.43□□□□□ -2.48
COMMD3-211ENST00000472673 HLA-DRB4P13762 266 aa-0.43□□□□□ -2.48
COMMD3-211ENST00000472673 Q6ZRX8 168 aa-0.43□□□□□ -2.48
COMMD3-211ENST00000472673 ATP6V0E2Q8NHE4 81 aa-0.43□□□□□ -2.48
COMMD3-211ENST00000472673 COX7B2Q8TF08 81 aa-0.43□□□□□ -2.48
COMMD3-211ENST00000472673 V9GYQ6 96 aa-0.43□□□□□ -2.48
COMMD3-211ENST00000472673 HLA-DRB4X5D2U9 266 aa-0.43□□□□□ -2.48
COMMD3-211ENST00000472673 AKAP11Q9UKA4 1901 aa-0.43□□□□□ -2.48
COMMD3-211ENST00000472673 PLXNA1Q9UIW2 1896 aa-0.44□□□□□ -2.48
COMMD3-211ENST00000472673 TRGV1A0A0A0MS02 117 aa-0.44□□□□□ -2.48
COMMD3-211ENST00000472673 TRAV2A0A0B4J234 112 aa-0.44□□□□□ -2.48
COMMD3-211ENST00000472673 GCHFRP30047 84 aa-0.44□□□□□ -2.48
COMMD3-211ENST00000472673 TFAMQ00059 246 aaKnown RBP-0.44□□□□□ -2.48
COMMD3-211ENST00000472673 SSBP1Q04837 148 aaKnown RBP-0.44□□□□□ -2.48
COMMD3-211ENST00000472673 SLC48A1Q6P1K1 146 aa-0.44□□□□□ -2.48
COMMD3-211ENST00000472673 SSBP3-AS1Q7Z2R9 100 aa-0.44□□□□□ -2.48
COMMD3-211ENST00000472673 V9GYV3 84 aa-0.44□□□□□ -2.48
COMMD3-211ENST00000472673 ZNF142P52746 1687 aaPredicted RBP-0.44□□□□□ -2.48
COMMD3-211ENST00000472673 ATRQ13535 2644 aa-0.44□□□□□ -2.48
COMMD3-211ENST00000472673 ALMS1Q8TCU4 4167 aa-0.44□□□□□ -2.48
COMMD3-211ENST00000472673 SETXQ7Z333 2677 aaKnown RBP-0.44□□□□□ -2.48
COMMD3-211ENST00000472673 NEBP20929 6669 aa-0.45□□□□□ -2.48
COMMD3-211ENST00000472673 APC2O95996 2303 aa-0.45□□□□□ -2.48
COMMD3-211ENST00000472673 PLCE1Q9P212 2302 aa-0.45□□□□□ -2.48
COMMD3-211ENST00000472673 TRAV36DV7A0A075B6V5 113 aa-0.45□□□□□ -2.48
COMMD3-211ENST00000472673 BORCS7-ASMTA0A0B4J1R7 106 aa-0.45□□□□□ -2.48
COMMD3-211ENST00000472673 ZNF815PA8K554 130 aa-0.45□□□□□ -2.48
COMMD3-211ENST00000472673 TNFSF15O95150 251 aa-0.45□□□□□ -2.48
COMMD3-211ENST00000472673 RBP4P02753 201 aa-0.45□□□□□ -2.48
COMMD3-211ENST00000472673 CMPK1P30085 196 aa-0.45□□□□□ -2.48
COMMD3-211ENST00000472673 CENPHQ9H3R5 247 aa-0.45□□□□□ -2.48
COMMD3-211ENST00000472673 LSM2Q9Y333 95 aaKnown RBP-0.45□□□□□ -2.48
COMMD3-211ENST00000472673 MYH9P35579 1960 aaKnown RBP-0.45□□□□□ -2.48
COMMD3-211ENST00000472673 PHIPQ8WWQ0 1821 aa-0.45□□□□□ -2.48
COMMD3-211ENST00000472673 SPTBN1Q01082 2364 aaKnown RBP-0.46□□□□□ -2.48
COMMD3-211ENST00000472673 NBEAL1Q6ZS30 2694 aa-0.46□□□□□ -2.48
COMMD3-211ENST00000472673 LAMB1P07942 1786 aa-0.46□□□□□ -2.48
COMMD3-211ENST00000472673 TRAV12-3A0A0B4J271 114 aa-0.46□□□□□ -2.48
COMMD3-211ENST00000472673 TMEM14DPA8MWL7 114 aa-0.46□□□□□ -2.48
COMMD3-211ENST00000472673 RPS28P62857 69 aaKnown RBP-0.46□□□□□ -2.48
COMMD3-211ENST00000472673 SPCS2Q15005 226 aa-0.46□□□□□ -2.48
COMMD3-211ENST00000472673 FAM74A4Q5TZK3 123 aa-0.46□□□□□ -2.48
COMMD3-211ENST00000472673 NDUFA11Q86Y39 141 aa-0.46□□□□□ -2.48
COMMD3-211ENST00000472673 UBE2DNLQ8IWF7 75 aa-0.46□□□□□ -2.48
COMMD3-211ENST00000472673 TCTE3Q8IZS6 198 aa-0.46□□□□□ -2.48
COMMD3-211ENST00000472673 SKA2Q8WVK7 121 aaPredicted RBP-0.46□□□□□ -2.48
COMMD3-211ENST00000472673 ERG28Q9UKR5 140 aa-0.46□□□□□ -2.48
COMMD3-211ENST00000472673 HIGD1AQ9Y241 93 aa-0.46□□□□□ -2.48
COMMD3-211ENST00000472673 GVINP1Q7Z2Y8 2422 aa-0.46□□□□□ -2.48
COMMD3-211ENST00000472673 J3QLW9 94 aa-0.47□□□□□ -2.48
COMMD3-211ENST00000472673 DEGS1O15121 323 aa-0.47□□□□□ -2.48
COMMD3-211ENST00000472673 SPRR2DP22532 72 aa-0.47□□□□□ -2.48
COMMD3-211ENST00000472673 INSL4Q14641 139 aa-0.47□□□□□ -2.48
COMMD3-211ENST00000472673 ATP11AUNQ6ZP68 121 aa-0.47□□□□□ -2.48
COMMD3-211ENST00000472673 WNK1Q9H4A3 2382 aa-0.47□□□□□ -2.49
COMMD3-211ENST00000472673 COL6A3P12111 3177 aa-0.47□□□□□ -2.49
COMMD3-211ENST00000472673 NF1P21359 2839 aa-0.47□□□□□ -2.49
COMMD3-211ENST00000472673 STAB2Q8WWQ8 2551 aa-0.48□□□□□ -2.49
COMMD3-211ENST00000472673 TSTD3H0UI37 97 aa-0.48□□□□□ -2.49
COMMD3-211ENST00000472673 SMIM15Q7Z3B0 74 aa-0.48□□□□□ -2.49
COMMD3-211ENST00000472673 DDA1Q9BW61 102 aa-0.48□□□□□ -2.49
COMMD3-211ENST00000472673 CYP4F30PQ9H0H9 118 aa-0.48□□□□□ -2.49
COMMD3-211ENST00000472673 PRO0255Q9UI72 69 aa-0.48□□□□□ -2.49
COMMD3-211ENST00000472673 GINS2Q9Y248 185 aa-0.48□□□□□ -2.49
COMMD3-211ENST00000472673 FLNBO75369 2602 aaKnown RBP-0.48□□□□□ -2.49
COMMD3-211ENST00000472673 ARFGEF1Q9Y6D6 1849 aa-0.48□□□□□ -2.49
COMMD3-211ENST00000472673 UHRF1BP1LA0JNW5 1464 aa-0.48□□□□□ -2.49
COMMD3-211ENST00000472673 ERCC6Q03468 1493 aa-0.48□□□□□ -2.49
COMMD3-211ENST00000472673 GOLGA3Q08378 1498 aa-0.48□□□□□ -2.49
COMMD3-211ENST00000472673 SYNJ1O43426 1573 aa-0.49□□□□□ -2.49
COMMD3-211ENST00000472673 NRXN2Q9P2S2 1712 aa-0.49□□□□□ -2.49
COMMD3-211ENST00000472673 A0A1B0GX51 115 aa-0.49□□□□□ -2.49
COMMD3-211ENST00000472673 G3V318 75 aa-0.49□□□□□ -2.49
COMMD3-211ENST00000472673 M0R129 80 aa-0.49□□□□□ -2.49
COMMD3-211ENST00000472673 SCTP09683 121 aa-0.49□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms