RNA–Protein interactions for RNA: ENST00000472638.1

UBQLN4-203, Transcript of ubiquilin 4, humanhuman

TSL 5

Gene UBQLN4, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-203ENST00000472638 OR5AL1P0C617 328 aa13.81□□□□□ -0.2
UBQLN4-203ENST00000472638 FOXA3P55318 350 aaPredicted RBP13.81□□□□□ -0.2
UBQLN4-203ENST00000472638 FER1L6-AS1Q8NA97 138 aa13.81□□□□□ -0.2
UBQLN4-203ENST00000472638 GTSF1Q8WW33 167 aa13.81□□□□□ -0.2
UBQLN4-203ENST00000472638 C9orf85Q96MD7 179 aa13.81□□□□□ -0.2
UBQLN4-203ENST00000472638 MDFICQ9P1T7 246 aa13.81□□□□□ -0.2
UBQLN4-203ENST00000472638 NACAE9PAV3 2078 aa13.81□□□□□ -0.2
UBQLN4-203ENST00000472638 ZNRF2Q8NHG8 242 aa13.8□□□□□ -0.2
UBQLN4-203ENST00000472638 SSBP4Q9BWG4 385 aaPredicted RBP13.8□□□□□ -0.2
UBQLN4-203ENST00000472638 SCRT2Q9NQ03 307 aa13.8□□□□□ -0.2
UBQLN4-203ENST00000472638 NAT8BQ9UHF3 227 aa13.8□□□□□ -0.2
UBQLN4-203ENST00000472638 DNAH2Q9P225 4427 aa13.79□□□□□ -0.2
UBQLN4-203ENST00000472638 HIGD1CA8MV81 97 aa13.79□□□□□ -0.2
UBQLN4-203ENST00000472638 F2Z2F3 143 aa13.79□□□□□ -0.2
UBQLN4-203ENST00000472638 VSIG2Q96IQ7 327 aa13.79□□□□□ -0.2
UBQLN4-203ENST00000472638 C18orf15Q96N68 181 aa13.79□□□□□ -0.2
UBQLN4-203ENST00000472638 ARMS2P0C7Q2 107 aa13.78□□□□□ -0.2
UBQLN4-203ENST00000472638 KCNIP4Q6PIL6 250 aa13.78□□□□□ -0.2
UBQLN4-203ENST00000472638 SPXQ9BT56 116 aa13.78□□□□□ -0.2
UBQLN4-203ENST00000472638 CNFNQ9BYD5 112 aa13.78□□□□□ -0.2
UBQLN4-203ENST00000472638 H3BNG1 76 aa13.77□□□□□ -0.21
UBQLN4-203ENST00000472638 S100PP25815 95 aa13.77□□□□□ -0.21
UBQLN4-203ENST00000472638 C1orf134Q5TEV5 83 aa13.77□□□□□ -0.21
UBQLN4-203ENST00000472638 HECTD4Q9Y4D8 3996 aa13.76□□□□□ -0.21
UBQLN4-203ENST00000472638 TRAV9-1A0A075B6T8 112 aa13.76□□□□□ -0.21
UBQLN4-203ENST00000472638 NBDYA0A0U1RRE5 68 aa13.76□□□□□ -0.21
UBQLN4-203ENST00000472638 A0A1B0GVY2 172 aa13.76□□□□□ -0.21
UBQLN4-203ENST00000472638 NXPH4O95158 308 aa13.76□□□□□ -0.21
UBQLN4-203ENST00000472638 ESRGQ1W209 222 aa13.76□□□□□ -0.21
UBQLN4-203ENST00000472638 WDR73Q6P4I2 378 aa13.76□□□□□ -0.21
UBQLN4-203ENST00000472638 LYZL1Q6UWQ5 148 aa13.76□□□□□ -0.21
UBQLN4-203ENST00000472638 NUP35Q8NFH5 326 aa13.76□□□□□ -0.21
UBQLN4-203ENST00000472638 PTH2Q96A98 100 aa13.76□□□□□ -0.21
UBQLN4-203ENST00000472638 TPPP3Q9BW30 176 aa13.76□□□□□ -0.21
UBQLN4-203ENST00000472638 PHLDA3Q9Y5J5 127 aa13.76□□□□□ -0.21
UBQLN4-203ENST00000472638 A0A096LPF7 62 aa13.75□□□□□ -0.21
UBQLN4-203ENST00000472638 CACNG7P62955 275 aa13.75□□□□□ -0.21
UBQLN4-203ENST00000472638 PIK3CD-AS1Q5SR53 167 aa13.75□□□□□ -0.21
UBQLN4-203ENST00000472638 BORCS7Q96B45 105 aa13.75□□□□□ -0.21
UBQLN4-203ENST00000472638 PGLYRP4Q96LB8 373 aa13.75□□□□□ -0.21
UBQLN4-203ENST00000472638 SMCO4Q9NRQ5 59 aa13.75□□□□□ -0.21
UBQLN4-203ENST00000472638 DNAH17Q9UFH2 4485 aa13.74□□□□□ -0.21
UBQLN4-203ENST00000472638 M0R2P5 195 aa13.74□□□□□ -0.21
UBQLN4-203ENST00000472638 PAX4O43316 350 aa13.74□□□□□ -0.21
UBQLN4-203ENST00000472638 ZFP82Q8N141 532 aa13.74□□□□□ -0.21
UBQLN4-203ENST00000472638 Q9H8V8 135 aa13.74□□□□□ -0.21
UBQLN4-203ENST00000472638 FAT2Q9NYQ8 4349 aa13.73□□□□□ -0.21
UBQLN4-203ENST00000472638 A0A1B0GUT8 65 aa13.73□□□□□ -0.21
UBQLN4-203ENST00000472638 FHL2Q14192 279 aa13.73□□□□□ -0.21
UBQLN4-203ENST00000472638 SYT8Q8NBV8 401 aa13.73□□□□□ -0.21
UBQLN4-203ENST00000472638 OR10AG1Q8NH19 301 aa13.73□□□□□ -0.21
UBQLN4-203ENST00000472638 BTF3L4Q96K17 158 aa13.73□□□□□ -0.21
UBQLN4-203ENST00000472638 SPANXN1Q5VSR9 72 aa13.72□□□□□ -0.21
UBQLN4-203ENST00000472638 ATP5L2Q7Z4Y8 100 aa13.72□□□□□ -0.21
UBQLN4-203ENST00000472638 CBLN2Q8IUK8 224 aa13.72□□□□□ -0.21
UBQLN4-203ENST00000472638 ZNF479Q96JC4 524 aa13.72□□□□□ -0.21
UBQLN4-203ENST00000472638 HHLA3Q9XRX5 114 aa13.72□□□□□ -0.21
UBQLN4-203ENST00000472638 URGCP-MRPS24S4R325 110 aa13.72□□□□□ -0.21
UBQLN4-203ENST00000472638 TRGV4A0A0C4DH28 118 aa13.71□□□□□ -0.21
UBQLN4-203ENST00000472638 PRO0255Q9UI72 69 aa13.71□□□□□ -0.21
UBQLN4-203ENST00000472638 MRPS16Q9Y3D3 137 aaKnown RBP13.71□□□□□ -0.21
UBQLN4-203ENST00000472638 ICOSQ9Y6W8 199 aa13.71□□□□□ -0.21
UBQLN4-203ENST00000472638 A0A1B0GW15 77 aa13.7□□□□□ -0.22
UBQLN4-203ENST00000472638 M0R381 172 aa13.7□□□□□ -0.22
UBQLN4-203ENST00000472638 CRYBA4P53673 196 aa13.7□□□□□ -0.22
UBQLN4-203ENST00000472638 RIGQ13278 110 aa13.7□□□□□ -0.22
UBQLN4-203ENST00000472638 ZNF876PQ49A33 203 aa13.7□□□□□ -0.22
UBQLN4-203ENST00000472638 C6orf223Q8N319 242 aa13.7□□□□□ -0.22
UBQLN4-203ENST00000472638 RASL10AQ92737 203 aa13.7□□□□□ -0.22
UBQLN4-203ENST00000472638 YPEL4Q96NS1 127 aa13.7□□□□□ -0.22
UBQLN4-203ENST00000472638 MUC4Q99102 2169 aa13.69□□□□□ -0.22
UBQLN4-203ENST00000472638 A0A1B0GXF2 115 aa13.69□□□□□ -0.22
UBQLN4-203ENST00000472638 ELOBQ15370 118 aa13.69□□□□□ -0.22
UBQLN4-203ENST00000472638 DMRTA1Q5VZB9 504 aa13.69□□□□□ -0.22
UBQLN4-203ENST00000472638 TRBV24-1A0A075B6N3 115 aa13.68□□□□□ -0.22
UBQLN4-203ENST00000472638 MUC21A0A0G2JKD1 596 aa13.68□□□□□ -0.22
UBQLN4-203ENST00000472638 MUC21A0A140T8X8 626 aa13.68□□□□□ -0.22
UBQLN4-203ENST00000472638 SCO1O75880 301 aa13.68□□□□□ -0.22
UBQLN4-203ENST00000472638 NTF3P20783 257 aa13.68□□□□□ -0.22
UBQLN4-203ENST00000472638 HBBP68871 147 aa13.68□□□□□ -0.22
UBQLN4-203ENST00000472638 SLAQ13239 276 aa13.68□□□□□ -0.22
UBQLN4-203ENST00000472638 RASL11AQ6T310 242 aa13.68□□□□□ -0.22
UBQLN4-203ENST00000472638 AP1S3Q96PC3 154 aa13.68□□□□□ -0.22
UBQLN4-203ENST00000472638 UPK3BQ9BT76 320 aa13.68□□□□□ -0.22
UBQLN4-203ENST00000472638 KRTAP1-5Q9BYS1 174 aa13.68□□□□□ -0.22
UBQLN4-203ENST00000472638 S100A8P05109 93 aa13.67□□□□□ -0.22
UBQLN4-203ENST00000472638 TRGC1P0CF51 173 aa13.67□□□□□ -0.22
UBQLN4-203ENST00000472638 TWIST1Q15672 202 aa13.67□□□□□ -0.22
UBQLN4-203ENST00000472638 MRPL54Q6P161 138 aaKnown RBP13.67□□□□□ -0.22
UBQLN4-203ENST00000472638 A8MWV9 139 aa13.66□□□□□ -0.22
UBQLN4-203ENST00000472638 TNP2Q05952 138 aa13.66□□□□□ -0.22
UBQLN4-203ENST00000472638 GATD1Q8NB37 220 aa13.66□□□□□ -0.22
UBQLN4-203ENST00000472638 OR4C5Q8NGB2 326 aa13.66□□□□□ -0.22
UBQLN4-203ENST00000472638 TRAV4A0A0B4J268 109 aa13.65□□□□□ -0.22
UBQLN4-203ENST00000472638 TTC32Q5I0X7 151 aa13.65□□□□□ -0.22
UBQLN4-203ENST00000472638 MSRB1Q9NZV6 116 aa13.65□□□□□ -0.22
UBQLN4-203ENST00000472638 GYPEP15421 78 aa13.64□□□□□ -0.23
UBQLN4-203ENST00000472638 SSTP61278 116 aa13.64□□□□□ -0.23
UBQLN4-203ENST00000472638 MRPL23Q16540 153 aaKnown RBP13.64□□□□□ -0.23
UBQLN4-203ENST00000472638 COX19Q49B96 90 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 179.6 ms