RNA–Protein interactions for RNA: ENST00000469278.5

SOX2-OT-204, SOX2 overlapping transcript, humanhuman

TSL 4

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-204ENST00000469278 MUC5ACP98088 5654 aa0.46□□□□□ -2.34
SOX2-OT-204ENST00000469278 UNC79Q9P2D8 2635 aa0.46□□□□□ -2.34
SOX2-OT-204ENST00000469278 TNCP24821 2201 aa0.45□□□□□ -2.34
SOX2-OT-204ENST00000469278 TRAV12-3A0A0B4J271 114 aa0.45□□□□□ -2.34
SOX2-OT-204ENST00000469278 NCR2O95944 276 aa0.45□□□□□ -2.34
SOX2-OT-204ENST00000469278 RRAS2P62070 204 aaPredicted RBP0.45□□□□□ -2.34
SOX2-OT-204ENST00000469278 SMIM21Q3B7S5 101 aa0.45□□□□□ -2.34
SOX2-OT-204ENST00000469278 TPT1P8Q9HAU6 139 aa0.45□□□□□ -2.34
SOX2-OT-204ENST00000469278 NDUFA12Q9UI09 145 aa0.45□□□□□ -2.34
SOX2-OT-204ENST00000469278 TANC1Q9C0D5 1861 aa0.45□□□□□ -2.34
SOX2-OT-204ENST00000469278 KIAA0100Q14667 2235 aaKnown RBP0.45□□□□□ -2.34
SOX2-OT-204ENST00000469278 TSPAN19P0C672 248 aa0.44□□□□□ -2.34
SOX2-OT-204ENST00000469278 PIRTP0C851 137 aa0.44□□□□□ -2.34
SOX2-OT-204ENST00000469278 PIPP12273 146 aaPredicted RBP0.44□□□□□ -2.34
SOX2-OT-204ENST00000469278 EMX2Q04743 252 aa0.44□□□□□ -2.34
SOX2-OT-204ENST00000469278 SLC48A1Q6P1K1 146 aa0.44□□□□□ -2.34
SOX2-OT-204ENST00000469278 VMO1Q7Z5L0 202 aa0.44□□□□□ -2.34
SOX2-OT-204ENST00000469278 C20orf197Q8N268 126 aa0.44□□□□□ -2.34
SOX2-OT-204ENST00000469278 PFDN5Q99471 154 aa0.44□□□□□ -2.34
SOX2-OT-204ENST00000469278 BPESC1Q9GZL8 116 aa0.44□□□□□ -2.34
SOX2-OT-204ENST00000469278 RPRMQ9NS64 109 aa0.44□□□□□ -2.34
SOX2-OT-204ENST00000469278 V9GYV3 84 aa0.44□□□□□ -2.34
SOX2-OT-204ENST00000469278 MYH6P13533 1939 aa0.44□□□□□ -2.34
SOX2-OT-204ENST00000469278 LOC105371267A0A1B0GV96 52 aa0.43□□□□□ -2.34
SOX2-OT-204ENST00000469278 SNCGO76070 127 aa0.43□□□□□ -2.34
SOX2-OT-204ENST00000469278 CCL3L1P16619 93 aa0.43□□□□□ -2.34
SOX2-OT-204ENST00000469278 NPC2P61916 151 aa0.43□□□□□ -2.34
SOX2-OT-204ENST00000469278 COPZ1P61923 177 aa0.43□□□□□ -2.34
SOX2-OT-204ENST00000469278 KRTAP21-1Q3LI58 79 aa0.43□□□□□ -2.34
SOX2-OT-204ENST00000469278 COX7B2Q8TF08 81 aa0.43□□□□□ -2.34
SOX2-OT-204ENST00000469278 TCEAL4Q96EI5 215 aa0.43□□□□□ -2.34
SOX2-OT-204ENST00000469278 F5P12259 2224 aa0.43□□□□□ -2.34
SOX2-OT-204ENST00000469278 FHAD1B1AJZ9 1412 aa0.43□□□□□ -2.34
SOX2-OT-204ENST00000469278 MEGF8Q7Z7M0 2845 aa0.43□□□□□ -2.34
SOX2-OT-204ENST00000469278 BDP1A6H8Y1 2624 aa0.43□□□□□ -2.34
SOX2-OT-204ENST00000469278 TRBV7-1A0A0A6YYK4 115 aa0.42□□□□□ -2.34
SOX2-OT-204ENST00000469278 NPFFO15130 113 aa0.42□□□□□ -2.34
SOX2-OT-204ENST00000469278 IFNA17P01571 189 aa0.42□□□□□ -2.34
SOX2-OT-204ENST00000469278 APODP05090 189 aa0.42□□□□□ -2.34
SOX2-OT-204ENST00000469278 IL5P05113 134 aa0.42□□□□□ -2.34
SOX2-OT-204ENST00000469278 SCIMPQ6UWF3 145 aa0.42□□□□□ -2.34
SOX2-OT-204ENST00000469278 Q6ZUT4 128 aa0.42□□□□□ -2.34
SOX2-OT-204ENST00000469278 KCNRGQ8N5I3 272 aa0.42□□□□□ -2.34
SOX2-OT-204ENST00000469278 PROK2Q9HC23 129 aa0.42□□□□□ -2.34
SOX2-OT-204ENST00000469278 TMEM242Q9NWH2 141 aa0.42□□□□□ -2.34
SOX2-OT-204ENST00000469278 MAP2P11137 1827 aaKnown RBP0.42□□□□□ -2.34
SOX2-OT-204ENST00000469278 ZNF142P52746 1687 aaPredicted RBP0.42□□□□□ -2.34
SOX2-OT-204ENST00000469278 KMT2DO14686 5537 aa0.42□□□□□ -2.34
SOX2-OT-204ENST00000469278 JMJD1CQ15652 2540 aa0.41□□□□□ -2.34
SOX2-OT-204ENST00000469278 CEP152O94986 1710 aa0.41□□□□□ -2.34
SOX2-OT-204ENST00000469278 GUCA1AP43080 201 aaPredicted RBP0.41□□□□□ -2.34
SOX2-OT-204ENST00000469278 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.41□□□□□ -2.34
SOX2-OT-204ENST00000469278 SMIM11BQ8TCY0 68 aa0.41□□□□□ -2.34
SOX2-OT-204ENST00000469278 SPTSSAQ969W0 71 aa0.41□□□□□ -2.34
SOX2-OT-204ENST00000469278 TTC28Q96AY4 2481 aa0.41□□□□□ -2.34
SOX2-OT-204ENST00000469278 PTPRMP28827 1452 aa0.41□□□□□ -2.34
SOX2-OT-204ENST00000469278 DOCK11Q5JSL3 2073 aa0.41□□□□□ -2.34
SOX2-OT-204ENST00000469278 CADP27708 2225 aa0.4□□□□□ -2.35
SOX2-OT-204ENST00000469278 ACYP2P14621 99 aa0.4□□□□□ -2.35
SOX2-OT-204ENST00000469278 UBE2G1P62253 170 aa0.4□□□□□ -2.35
SOX2-OT-204ENST00000469278 RPS25P62851 125 aaKnown RBP0.4□□□□□ -2.35
SOX2-OT-204ENST00000469278 C9orf116Q5BN46 136 aaPredicted RBP0.4□□□□□ -2.35
SOX2-OT-204ENST00000469278 SCP2D1Q9UJQ7 156 aa0.4□□□□□ -2.35
SOX2-OT-204ENST00000469278 COL6A3P12111 3177 aa0.4□□□□□ -2.35
SOX2-OT-204ENST00000469278 PRG4Q92954 1404 aaPredicted RBP0.39□□□□□ -2.35
SOX2-OT-204ENST00000469278 MDN1Q9NU22 5596 aa0.39□□□□□ -2.35
SOX2-OT-204ENST00000469278 CDK13Q14004 1512 aaKnown RBP0.39□□□□□ -2.35
SOX2-OT-204ENST00000469278 TNS1Q9HBL0 1735 aaKnown RBP0.39□□□□□ -2.35
SOX2-OT-204ENST00000469278 KRTAP2-3P0C7H8 128 aa0.39□□□□□ -2.35
SOX2-OT-204ENST00000469278 SMIM6P0DI80 62 aa0.39□□□□□ -2.35
SOX2-OT-204ENST00000469278 COX6A2Q02221 97 aa0.39□□□□□ -2.35
SOX2-OT-204ENST00000469278 KRTAP2-4Q9BYR9 128 aa0.39□□□□□ -2.35
SOX2-OT-204ENST00000469278 KRTAP2-1Q9BYU5 128 aa0.39□□□□□ -2.35
SOX2-OT-204ENST00000469278 PAIP2BQ9ULR5 123 aaKnown RBP0.39□□□□□ -2.35
SOX2-OT-204ENST00000469278 PTPRZ1P23471 2315 aaPredicted RBP0.39□□□□□ -2.35
SOX2-OT-204ENST00000469278 PARP14Q460N5 1801 aa0.38□□□□□ -2.35
SOX2-OT-204ENST00000469278 CACNA1HO95180 2353 aa0.38□□□□□ -2.35
SOX2-OT-204ENST00000469278 TPRP12270 2363 aaKnown RBP0.38□□□□□ -2.35
SOX2-OT-204ENST00000469278 PLXNA1Q9UIW2 1896 aa0.38□□□□□ -2.35
SOX2-OT-204ENST00000469278 GVQW2A0A096LPI5 108 aaPredicted RBP0.38□□□□□ -2.35
SOX2-OT-204ENST00000469278 NDUFB6O95139 128 aa0.38□□□□□ -2.35
SOX2-OT-204ENST00000469278 S100A7L2Q5SY68 101 aa0.38□□□□□ -2.35
SOX2-OT-204ENST00000469278 SPTSSBQ8NFR3 76 aa0.38□□□□□ -2.35
SOX2-OT-204ENST00000469278 TMEM191AQ9H0A3 160 aa0.38□□□□□ -2.35
SOX2-OT-204ENST00000469278 SOGA1O94964 1423 aa0.38□□□□□ -2.35
SOX2-OT-204ENST00000469278 TMEM2Q9UHN6 1383 aa0.37□□□□□ -2.35
SOX2-OT-204ENST00000469278 PHIPQ8WWQ0 1821 aa0.37□□□□□ -2.35
SOX2-OT-204ENST00000469278 CBLN1P23435 193 aa0.37□□□□□ -2.35
SOX2-OT-204ENST00000469278 C10orf82Q8WW14 230 aa0.37□□□□□ -2.35
SOX2-OT-204ENST00000469278 CCDC167Q9P0B6 97 aa0.37□□□□□ -2.35
SOX2-OT-204ENST00000469278 NRXN2Q9P2S2 1712 aa0.37□□□□□ -2.35
SOX2-OT-204ENST00000469278 DAPK1P53355 1430 aa0.37□□□□□ -2.35
SOX2-OT-204ENST00000469278 PCLOQ9Y6V0 5065 aa0.36□□□□□ -2.35
SOX2-OT-204ENST00000469278 KDM6BO15054 1643 aa0.36□□□□□ -2.35
SOX2-OT-204ENST00000469278 A0A087WTM6 91 aa0.36□□□□□ -2.35
SOX2-OT-204ENST00000469278 PIGBOS1A0A0B4J2F0 54 aa0.36□□□□□ -2.35
SOX2-OT-204ENST00000469278 FAM92AA1XBS5 289 aa0.36□□□□□ -2.35
SOX2-OT-204ENST00000469278 NMBP08949 121 aa0.36□□□□□ -2.35
SOX2-OT-204ENST00000469278 GCHFRP30047 84 aa0.36□□□□□ -2.35
SOX2-OT-204ENST00000469278 EDDM3BP56851 147 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms