RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 MINOS1-NBL1R4GNA1 71 aa8.96□□□□□ -0.97
SYNE2-207ENST00000458046 C9JAW5 83 aa8.96□□□□□ -0.98
SYNE2-207ENST00000458046 BUB3O43684 328 aa8.96□□□□□ -0.98
SYNE2-207ENST00000458046 FGF6P10767 208 aa8.96□□□□□ -0.98
SYNE2-207ENST00000458046 LGALS9BQ3B8N2 356 aa8.96□□□□□ -0.98
SYNE2-207ENST00000458046 LGALS9CQ6DKI2 356 aa8.96□□□□□ -0.98
SYNE2-207ENST00000458046 RNF185Q96GF1 192 aa8.96□□□□□ -0.98
SYNE2-207ENST00000458046 F8P00451 2351 aa8.96□□□□□ -0.98
SYNE2-207ENST00000458046 TRAV8-6A0A0B4J262 113 aa8.95□□□□□ -0.98
SYNE2-207ENST00000458046 RPS28P62857 69 aaKnown RBP8.95□□□□□ -0.98
SYNE2-207ENST00000458046 SELENOKQ9Y6D0 94 aa8.95□□□□□ -0.98
SYNE2-207ENST00000458046 GAGE12JA6NER3 117 aa8.95□□□□□ -0.98
SYNE2-207ENST00000458046 OOSP1A8MZH6 123 aa8.95□□□□□ -0.98
SYNE2-207ENST00000458046 GAGE7O76087 117 aa8.95□□□□□ -0.98
SYNE2-207ENST00000458046 GAGE12FP0CL80 117 aa8.95□□□□□ -0.98
SYNE2-207ENST00000458046 GAGE12GP0CL81 117 aa8.95□□□□□ -0.98
SYNE2-207ENST00000458046 GAGE12IP0CL82 117 aa8.95□□□□□ -0.98
SYNE2-207ENST00000458046 GAGE4Q13068 117 aa8.95□□□□□ -0.98
SYNE2-207ENST00000458046 CARD19Q96LW7 228 aa8.95□□□□□ -0.98
SYNE2-207ENST00000458046 NOTCH2Q04721 2471 aa8.94□□□□□ -0.98
SYNE2-207ENST00000458046 A0A1B0GX51 115 aa8.94□□□□□ -0.98
SYNE2-207ENST00000458046 C7orf71A4D174 169 aa8.94□□□□□ -0.98
SYNE2-207ENST00000458046 NMUP48645 174 aa8.94□□□□□ -0.98
SYNE2-207ENST00000458046 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.94□□□□□ -0.98
SYNE2-207ENST00000458046 MAP1AP78559 2803 aaPredicted RBP8.94□□□□□ -0.98
SYNE2-207ENST00000458046 SAA4P35542 130 aa8.94□□□□□ -0.98
SYNE2-207ENST00000458046 CFHR3Q02985 330 aa8.94□□□□□ -0.98
SYNE2-207ENST00000458046 PMAIP1Q13794 54 aa8.94□□□□□ -0.98
SYNE2-207ENST00000458046 Q6ZQT7 251 aa8.94□□□□□ -0.98
SYNE2-207ENST00000458046 PCP2Q8IVA1 136 aa8.94□□□□□ -0.98
SYNE2-207ENST00000458046 C11orf21Q9P2W6 132 aa8.94□□□□□ -0.98
SYNE2-207ENST00000458046 USP9YO00507 2555 aaPredicted RBP8.94□□□□□ -0.98
SYNE2-207ENST00000458046 COL12A1Q99715 3063 aa8.93□□□□□ -0.98
SYNE2-207ENST00000458046 CLPSL1A2RUU4 121 aa8.93□□□□□ -0.98
SYNE2-207ENST00000458046 AGPAT4-IT1Q9H0P7 198 aa8.93□□□□□ -0.98
SYNE2-207ENST00000458046 LINC00527Q9UJ94 153 aa8.93□□□□□ -0.98
SYNE2-207ENST00000458046 IGKV3D-20A0A0C4DH25 116 aa8.93□□□□□ -0.98
SYNE2-207ENST00000458046 ANAPC13Q9BS18 74 aa8.93□□□□□ -0.98
SYNE2-207ENST00000458046 ZNF256Q9Y2P7 627 aaPredicted RBP8.92□□□□□ -0.98
SYNE2-207ENST00000458046 IGHV3OR16-10A0A075B7F0 116 aa8.92□□□□□ -0.98
SYNE2-207ENST00000458046 TMEM219Q86XT9 240 aa8.92□□□□□ -0.98
SYNE2-207ENST00000458046 OVOL2Q9BRP0 275 aa8.92□□□□□ -0.98
SYNE2-207ENST00000458046 TRGV3P03979 118 aa8.91□□□□□ -0.98
SYNE2-207ENST00000458046 PRSS1P07477 247 aa8.91□□□□□ -0.98
SYNE2-207ENST00000458046 TRAV8-2A0A0B4J237 113 aa8.91□□□□□ -0.98
SYNE2-207ENST00000458046 TRAV26-2A0A0B4J265 109 aa8.91□□□□□ -0.98
SYNE2-207ENST00000458046 KIR2DL4Q99706 377 aa8.91□□□□□ -0.98
SYNE2-207ENST00000458046 TTTY13Q9BZ97 58 aa8.91□□□□□ -0.98
SYNE2-207ENST00000458046 SEC11AP67812 179 aa8.9□□□□□ -0.98
SYNE2-207ENST00000458046 RAB37Q96AX2 223 aa8.9□□□□□ -0.98
SYNE2-207ENST00000458046 CNFNQ9BYD5 112 aa8.9□□□□□ -0.98
SYNE2-207ENST00000458046 BPESC1Q9GZL8 116 aa8.9□□□□□ -0.98
SYNE2-207ENST00000458046 LINC00694P0DN24 101 aa8.9□□□□□ -0.98
SYNE2-207ENST00000458046 GAGE13Q4V321 117 aa8.9□□□□□ -0.98
SYNE2-207ENST00000458046 TMEM158Q8WZ71 300 aa8.9□□□□□ -0.98
SYNE2-207ENST00000458046 NF1P21359 2839 aa8.9□□□□□ -0.99
SYNE2-207ENST00000458046 GAGE12BA1L429 117 aa8.89□□□□□ -0.99
SYNE2-207ENST00000458046 H7C1H1 209 aa8.89□□□□□ -0.99
SYNE2-207ENST00000458046 FCER1GP30273 86 aa8.89□□□□□ -0.99
SYNE2-207ENST00000458046 METTL26Q96S19 204 aa8.89□□□□□ -0.99
SYNE2-207ENST00000458046 SLC50A1Q9BRV3 221 aa8.89□□□□□ -0.99
SYNE2-207ENST00000458046 IGKV2D-26A0A0A0MRZ7 120 aa8.89□□□□□ -0.99
SYNE2-207ENST00000458046 RBAKDNA6NC62 111 aa8.88□□□□□ -0.99
SYNE2-207ENST00000458046 H3BUT2 72 aa8.88□□□□□ -0.99
SYNE2-207ENST00000458046 LMO4P61968 165 aa8.88□□□□□ -0.99
SYNE2-207ENST00000458046 MRPL55Q7Z7F7 128 aaKnown RBP8.88□□□□□ -0.99
SYNE2-207ENST00000458046 AP1S3Q96PC3 154 aa8.88□□□□□ -0.99
SYNE2-207ENST00000458046 NXT2Q9NPJ8 142 aaKnown RBP8.88□□□□□ -0.99
SYNE2-207ENST00000458046 HIVEP3Q5T1R4 2406 aa8.88□□□□□ -0.99
SYNE2-207ENST00000458046 NPFFO15130 113 aa8.88□□□□□ -0.99
SYNE2-207ENST00000458046 A6NDN8 102 aa8.87□□□□□ -0.99
SYNE2-207ENST00000458046 EFNA4P52798 201 aa8.87□□□□□ -0.99
SYNE2-207ENST00000458046 ATP5G2Q06055 141 aa8.87□□□□□ -0.99
SYNE2-207ENST00000458046 HSD52Q0P140 79 aa8.87□□□□□ -0.99
SYNE2-207ENST00000458046 C1orf158Q8N1D5 194 aa8.87□□□□□ -0.99
SYNE2-207ENST00000458046 SPATA25Q9BR10 227 aa8.87□□□□□ -0.99
SYNE2-207ENST00000458046 IGHV7-4-1A0A0J9YVY3 117 aa8.87□□□□□ -0.99
SYNE2-207ENST00000458046 F6UB75 175 aa8.87□□□□□ -0.99
SYNE2-207ENST00000458046 SMIM17P0DL12 118 aa8.87□□□□□ -0.99
SYNE2-207ENST00000458046 SPANXN1Q5VSR9 72 aa8.87□□□□□ -0.99
SYNE2-207ENST00000458046 GTSCR1Q86UQ5 136 aa8.87□□□□□ -0.99
SYNE2-207ENST00000458046 C19orf73Q9NVV2 129 aa8.87□□□□□ -0.99
SYNE2-207ENST00000458046 HHLA3Q9XRX5 114 aa8.87□□□□□ -0.99
SYNE2-207ENST00000458046 TRBV7-1A0A0A6YYK4 115 aa8.87□□□□□ -0.99
SYNE2-207ENST00000458046 C9orf118A6NHY6 69 aa8.87□□□□□ -0.99
SYNE2-207ENST00000458046 H3BRM9 83 aa8.87□□□□□ -0.99
SYNE2-207ENST00000458046 DEFB1P60022 68 aa8.87□□□□□ -0.99
SYNE2-207ENST00000458046 PMVKQ15126 192 aa8.87□□□□□ -0.99
SYNE2-207ENST00000458046 C5orf56Q8N8D9 126 aa8.87□□□□□ -0.99
SYNE2-207ENST00000458046 Q8N8P6 123 aa8.87□□□□□ -0.99
SYNE2-207ENST00000458046 GAGE12HA6NDE8 117 aa8.86□□□□□ -0.99
SYNE2-207ENST00000458046 RPL18AQ02543 176 aaKnown RBP8.86□□□□□ -0.99
SYNE2-207ENST00000458046 PRR9Q5T870 116 aa8.86□□□□□ -0.99
SYNE2-207ENST00000458046 OR4X2Q8NGF9 303 aa8.86□□□□□ -0.99
SYNE2-207ENST00000458046 IGLV2-18A0A075B6J9 118 aa8.86□□□□□ -0.99
SYNE2-207ENST00000458046 H3BVH4 76 aa8.86□□□□□ -0.99
SYNE2-207ENST00000458046 IGKCP01834 107 aa8.86□□□□□ -0.99
SYNE2-207ENST00000458046 BRD3OSQ6XYD6 125 aa8.86□□□□□ -0.99
SYNE2-207ENST00000458046 EDA2RQ9HAV5 297 aa8.86□□□□□ -0.99
SYNE2-207ENST00000458046 LINC01546A6NGU7 62 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms