RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 SCIMPQ6UWF3 145 aa0.04□□□□□ -2.4
CDC40-204ENST00000431461 BATF3Q9NR55 127 aa0.04□□□□□ -2.4
CDC40-204ENST00000431461 FSIP2Q5CZC0 6907 aa0.03□□□□□ -2.4
CDC40-204ENST00000431461 PIGBOS1A0A0B4J2F0 54 aa0.03□□□□□ -2.4
CDC40-204ENST00000431461 C10orf142B7Z368 130 aa0.03□□□□□ -2.4
CDC40-204ENST00000431461 SMIM6P0DI80 62 aa0.03□□□□□ -2.4
CDC40-204ENST00000431461 INSL4Q14641 139 aa0.03□□□□□ -2.4
CDC40-204ENST00000431461 RPL7L1Q6DKI1 246 aaKnown RBP0.03□□□□□ -2.4
CDC40-204ENST00000431461 IFI27L1Q96BM0 104 aa0.03□□□□□ -2.4
CDC40-204ENST00000431461 RPRMQ9NS64 109 aa0.03□□□□□ -2.4
CDC40-204ENST00000431461 TNS1Q9HBL0 1735 aaKnown RBP0.03□□□□□ -2.4
CDC40-204ENST00000431461 MYO7AQ13402 2215 aa0.03□□□□□ -2.4
CDC40-204ENST00000431461 CACNA1CQ13936 2221 aa0.03□□□□□ -2.4
CDC40-204ENST00000431461 VIRMAQ69YN4 1812 aaKnown RBP0.03□□□□□ -2.4
CDC40-204ENST00000431461 TRAV12-3A0A0B4J271 114 aa0.02□□□□□ -2.41
CDC40-204ENST00000431461 A0A0D9SFI3 127 aa0.02□□□□□ -2.41
CDC40-204ENST00000431461 TMEM14DPA8MWL7 114 aa0.02□□□□□ -2.41
CDC40-204ENST00000431461 NMBP08949 121 aa0.02□□□□□ -2.41
CDC40-204ENST00000431461 TSPAN19P0C672 248 aa0.02□□□□□ -2.41
CDC40-204ENST00000431461 PIPP12273 146 aaPredicted RBP0.02□□□□□ -2.41
CDC40-204ENST00000431461 Q5VV11 94 aa0.02□□□□□ -2.41
CDC40-204ENST00000431461 SPRR2GQ9BYE4 73 aa0.02□□□□□ -2.41
CDC40-204ENST00000431461 MRPL40Q9NQ50 206 aaKnown RBP0.02□□□□□ -2.41
CDC40-204ENST00000431461 ABCA12Q86UK0 2595 aa0.02□□□□□ -2.41
CDC40-204ENST00000431461 TTC28Q96AY4 2481 aa0.02□□□□□ -2.41
CDC40-204ENST00000431461 NCOR2Q9Y618 2525 aa0.01□□□□□ -2.41
CDC40-204ENST00000431461 SPINK8P0C7L1 97 aa0.01□□□□□ -2.41
CDC40-204ENST00000431461 ACYP2P14621 99 aa0.01□□□□□ -2.41
CDC40-204ENST00000431461 GCHFRP30047 84 aa0.01□□□□□ -2.41
CDC40-204ENST00000431461 LINC01545Q5VT33 79 aa0.01□□□□□ -2.41
CDC40-204ENST00000431461 Q6ZRX8 168 aa0.01□□□□□ -2.41
CDC40-204ENST00000431461 AKAP14Q86UN6 197 aa0.01□□□□□ -2.41
CDC40-204ENST00000431461 C20orf197Q8N268 126 aa0.01□□□□□ -2.41
CDC40-204ENST00000431461 LZICQ8WZA0 190 aa0.01□□□□□ -2.41
CDC40-204ENST00000431461 PSMG3Q9BT73 122 aaPredicted RBP0.01□□□□□ -2.41
CDC40-204ENST00000431461 LSM2Q9Y333 95 aaKnown RBP0.01□□□□□ -2.41
CDC40-204ENST00000431461 SYNE2Q8WXH0 6885 aaKnown RBP0.01□□□□□ -2.41
CDC40-204ENST00000431461 CASZ1Q86V15 1759 aa0.01□□□□□ -2.41
CDC40-204ENST00000431461 KIF13AQ9H1H9 1805 aa0.01□□□□□ -2.41
CDC40-204ENST00000431461 PLXNA1Q9UIW2 1896 aa0.01□□□□□ -2.41
CDC40-204ENST00000431461 CACNA1HO95180 2353 aa0.01□□□□□ -2.41
CDC40-204ENST00000431461 M0R2Z0 102 aa0□□□□□ -2.41
CDC40-204ENST00000431461 IFITM1P13164 125 aa0□□□□□ -2.41
CDC40-204ENST00000431461 GUCA1AP43080 201 aaPredicted RBP0□□□□□ -2.41
CDC40-204ENST00000431461 RRAS2P62070 204 aaPredicted RBP0□□□□□ -2.41
CDC40-204ENST00000431461 ABCA4P78363 2273 aa0□□□□□ -2.41
CDC40-204ENST00000431461 HIST1H1AQ02539 215 aaPredicted RBP0□□□□□ -2.41
CDC40-204ENST00000431461 C9orf116Q5BN46 136 aaPredicted RBP0□□□□□ -2.41
CDC40-204ENST00000431461 ZNF818PQ6ZRF7 136 aa0□□□□□ -2.41
CDC40-204ENST00000431461 UBE2DNLQ8IWF7 75 aa0□□□□□ -2.41
CDC40-204ENST00000431461 TCEAL4Q96EI5 215 aa0□□□□□ -2.41
CDC40-204ENST00000431461 ANKRD30AQ9BXX3 1397 aa0□□□□□ -2.41
CDC40-204ENST00000431461 CNFNQ9BYD5 112 aa0□□□□□ -2.41
CDC40-204ENST00000431461 TMEM2Q9UHN6 1383 aa0□□□□□ -2.41
CDC40-204ENST00000431461 NDUFA12Q9UI09 145 aa0□□□□□ -2.41
CDC40-204ENST00000431461 PAIP2BQ9ULR5 123 aaKnown RBP0□□□□□ -2.41
CDC40-204ENST00000431461 IGSF10Q6WRI0 2623 aa-0□□□□□ -2.41
CDC40-204ENST00000431461 JMJD1CQ15652 2540 aa-0.01□□□□□ -2.41
CDC40-204ENST00000431461 CADP27708 2225 aa-0.01□□□□□ -2.41
CDC40-204ENST00000431461 MED13LQ71F56 2210 aa-0.01□□□□□ -2.41
CDC40-204ENST00000431461 PTPRMP28827 1452 aa-0.01□□□□□ -2.41
CDC40-204ENST00000431461 A0A087WTM6 91 aa-0.01□□□□□ -2.41
CDC40-204ENST00000431461 TRBV10-3A0A0K0K1G6 114 aa-0.01□□□□□ -2.41
CDC40-204ENST00000431461 ABCA1O95477 2261 aa-0.01□□□□□ -2.41
CDC40-204ENST00000431461 LAMB1P07942 1786 aa-0.01□□□□□ -2.41
CDC40-204ENST00000431461 ZFYVE26Q68DK2 2539 aa-0.02□□□□□ -2.41
CDC40-204ENST00000431461 ERCC6Q03468 1493 aa-0.02□□□□□ -2.41
CDC40-204ENST00000431461 APOC4-APOC2K7ER74 178 aa-0.02□□□□□ -2.41
CDC40-204ENST00000431461 PIRTP0C851 137 aa-0.02□□□□□ -2.41
CDC40-204ENST00000431461 IGLC6P0CF74 106 aa-0.02□□□□□ -2.41
CDC40-204ENST00000431461 CBLN1P23435 193 aa-0.02□□□□□ -2.41
CDC40-204ENST00000431461 S100A3P33764 101 aa-0.02□□□□□ -2.41
CDC40-204ENST00000431461 EDDM3BP56851 147 aa-0.02□□□□□ -2.41
CDC40-204ENST00000431461 CKS1BP61024 79 aa-0.02□□□□□ -2.41
CDC40-204ENST00000431461 NPC2P61916 151 aa-0.02□□□□□ -2.41
CDC40-204ENST00000431461 COPS9Q8WXC6 57 aa-0.02□□□□□ -2.41
CDC40-204ENST00000431461 Q96NJ1 140 aa-0.02□□□□□ -2.41
CDC40-204ENST00000431461 CYP4F30PQ9H0H9 118 aa-0.02□□□□□ -2.41
CDC40-204ENST00000431461 PARP14Q460N5 1801 aa-0.02□□□□□ -2.41
CDC40-204ENST00000431461 DMBT1Q9UGM3 2413 aaPredicted RBP-0.02□□□□□ -2.41
CDC40-204ENST00000431461 NRXN2Q9P2S2 1712 aa-0.02□□□□□ -2.41
CDC40-204ENST00000431461 LRRC37A3O60309 1634 aa-0.02□□□□□ -2.41
CDC40-204ENST00000431461 HRNRQ86YZ3 2850 aaPredicted RBP-0.03□□□□□ -2.41
CDC40-204ENST00000431461 KIAA0100Q14667 2235 aaKnown RBP-0.03□□□□□ -2.41
CDC40-204ENST00000431461 ASXL3Q9C0F0 2248 aa-0.03□□□□□ -2.41
CDC40-204ENST00000431461 NDUFB6O95139 128 aa-0.03□□□□□ -2.41
CDC40-204ENST00000431461 ALX1Q15699 326 aa-0.03□□□□□ -2.41
CDC40-204ENST00000431461 BAGE3Q86Y29 109 aa-0.03□□□□□ -2.41
CDC40-204ENST00000431461 SPTSSAQ969W0 71 aa-0.03□□□□□ -2.41
CDC40-204ENST00000431461 WFDC6Q9BQY6 131 aa-0.03□□□□□ -2.41
CDC40-204ENST00000431461 CCDC167Q9P0B6 97 aa-0.03□□□□□ -2.41
CDC40-204ENST00000431461 COPZ2Q9P299 210 aa-0.03□□□□□ -2.41
CDC40-204ENST00000431461 AKAP11Q9UKA4 1901 aa-0.03□□□□□ -2.41
CDC40-204ENST00000431461 PHIPQ8WWQ0 1821 aa-0.03□□□□□ -2.42
CDC40-204ENST00000431461 PRG4Q92954 1404 aaPredicted RBP-0.04□□□□□ -2.42
CDC40-204ENST00000431461 IGF2RP11717 2491 aa-0.04□□□□□ -2.42
CDC40-204ENST00000431461 OTOGQ6ZRI0 2925 aa-0.04□□□□□ -2.42
CDC40-204ENST00000431461 TRGV1A0A0A0MS02 117 aa-0.04□□□□□ -2.42
CDC40-204ENST00000431461 K7ERU9 68 aa-0.04□□□□□ -2.42
CDC40-204ENST00000431461 TFF1P04155 84 aa-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms