RNA–Protein interactions for RNA: ENST00000427276.1

LINC01108-201, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 2 BASIC

Gene LINC01108, Length 3,152 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-201ENST00000427276 CELSR1Q9NYQ6 3014 aa5.7□□□□□ -1.5
LINC01108-201ENST00000427276 ZFHX3Q15911 3703 aa5.7□□□□□ -1.5
LINC01108-201ENST00000427276 TRAV21A0A0B4J279 112 aa5.7□□□□□ -1.5
LINC01108-201ENST00000427276 CCL21O00585 134 aa5.7□□□□□ -1.5
LINC01108-201ENST00000427276 SLC25A20O43772 301 aa5.7□□□□□ -1.5
LINC01108-201ENST00000427276 CRIP2P52943 208 aaPredicted RBP5.7□□□□□ -1.5
LINC01108-201ENST00000427276 TTC32Q5I0X7 151 aa5.7□□□□□ -1.5
LINC01108-201ENST00000427276 NTN5Q8WTR8 489 aaPredicted RBP5.7□□□□□ -1.5
LINC01108-201ENST00000427276 SEC61GP60059 68 aa5.69□□□□□ -1.5
LINC01108-201ENST00000427276 GAGE2BQ13066 116 aa5.69□□□□□ -1.5
LINC01108-201ENST00000427276 ZNF56Q15929 161 aa5.69□□□□□ -1.5
LINC01108-201ENST00000427276 LY6EQ16553 131 aa5.69□□□□□ -1.5
LINC01108-201ENST00000427276 GAGE2EQ4V326 116 aa5.69□□□□□ -1.5
LINC01108-201ENST00000427276 IGFL3Q6UXB1 125 aa5.69□□□□□ -1.5
LINC01108-201ENST00000427276 C3orf56Q8N813 242 aa5.69□□□□□ -1.5
LINC01108-201ENST00000427276 Q8N9W7 124 aa5.69□□□□□ -1.5
LINC01108-201ENST00000427276 C20orf173Q96LM9 149 aa5.69□□□□□ -1.5
LINC01108-201ENST00000427276 LINC00477Q96M19 166 aa5.69□□□□□ -1.5
LINC01108-201ENST00000427276 CCDC140Q96MF4 163 aa5.69□□□□□ -1.5
LINC01108-201ENST00000427276 ZFAND3Q9H8U3 227 aa5.69□□□□□ -1.5
LINC01108-201ENST00000427276 GAGE2DQ9UEU5 116 aa5.69□□□□□ -1.5
LINC01108-201ENST00000427276 TRAV12-1A0A0B4J245 112 aa5.69□□□□□ -1.5
LINC01108-201ENST00000427276 CD7P09564 240 aa5.69□□□□□ -1.5
LINC01108-201ENST00000427276 CFC1BP0CG36 223 aa5.69□□□□□ -1.5
LINC01108-201ENST00000427276 CFC1P0CG37 223 aa5.69□□□□□ -1.5
LINC01108-201ENST00000427276 TIRAPP58753 221 aa5.69□□□□□ -1.5
LINC01108-201ENST00000427276 NRGNQ92686 78 aa5.69□□□□□ -1.5
LINC01108-201ENST00000427276 PRO1854Q9UHT4 67 aa5.69□□□□□ -1.5
LINC01108-201ENST00000427276 USP24Q9UPU5 2620 aa5.69□□□□□ -1.5
LINC01108-201ENST00000427276 ERG28Q9UKR5 140 aa5.69□□□□□ -1.5
LINC01108-201ENST00000427276 TRAV12-3A0A0B4J271 114 aa5.68□□□□□ -1.5
LINC01108-201ENST00000427276 A0A0J9YY99 117 aa5.68□□□□□ -1.5
LINC01108-201ENST00000427276 TRBV12-3P01733 135 aa5.68□□□□□ -1.5
LINC01108-201ENST00000427276 TSPEAR-AS2P59090 65 aa5.68□□□□□ -1.5
LINC01108-201ENST00000427276 C5orf47Q569G3 176 aa5.68□□□□□ -1.5
LINC01108-201ENST00000427276 RNASE13Q5GAN3 156 aaKnown RBP5.68□□□□□ -1.5
LINC01108-201ENST00000427276 FAM159AQ6UWV7 190 aa5.68□□□□□ -1.5
LINC01108-201ENST00000427276 UNQ9165/PRO28630Q6UXU0 137 aa5.68□□□□□ -1.5
LINC01108-201ENST00000427276 COX8CQ7Z4L0 72 aa5.68□□□□□ -1.5
LINC01108-201ENST00000427276 CLPSL1A2RUU4 121 aa5.68□□□□□ -1.5
LINC01108-201ENST00000427276 J3QQQ9 107 aa5.68□□□□□ -1.5
LINC01108-201ENST00000427276 ZFP36P26651 326 aaKnown RBP5.68□□□□□ -1.5
LINC01108-201ENST00000427276 SAA4P35542 130 aa5.68□□□□□ -1.5
LINC01108-201ENST00000427276 PMVKQ15126 192 aa5.68□□□□□ -1.5
LINC01108-201ENST00000427276 C10orf126Q8N4M7 172 aa5.68□□□□□ -1.5
LINC01108-201ENST00000427276 TMEM190Q8WZ59 177 aa5.68□□□□□ -1.5
LINC01108-201ENST00000427276 IGHV3-73A0A0B4J1V6 119 aa5.67□□□□□ -1.5
LINC01108-201ENST00000427276 SDHAF1A6NFY7 115 aa5.67□□□□□ -1.5
LINC01108-201ENST00000427276 FAM110DQ8TAY7 271 aaPredicted RBP5.67□□□□□ -1.5
LINC01108-201ENST00000427276 TRAV12-2A0A075B6T6 113 aa5.67□□□□□ -1.5
LINC01108-201ENST00000427276 A0A0U1RRA0 63 aa5.67□□□□□ -1.5
LINC01108-201ENST00000427276 RBAKDNA6NC62 111 aa5.67□□□□□ -1.5
LINC01108-201ENST00000427276 UBE2D1P51668 147 aa5.67□□□□□ -1.5
LINC01108-201ENST00000427276 SIRPDQ9H106 197 aa5.67□□□□□ -1.5
LINC01108-201ENST00000427276 LINC01546A6NGU7 62 aa5.67□□□□□ -1.5
LINC01108-201ENST00000427276 BRD3OSQ6XYD6 125 aa5.67□□□□□ -1.5
LINC01108-201ENST00000427276 PIP4P1Q86T03 277 aa5.67□□□□□ -1.5
LINC01108-201ENST00000427276 SMIM20Q8N5G0 67 aa5.67□□□□□ -1.5
LINC01108-201ENST00000427276 TRAV4A0A0B4J268 109 aa5.66□□□□□ -1.5
LINC01108-201ENST00000427276 WIPF1O43516 503 aa5.66□□□□□ -1.5
LINC01108-201ENST00000427276 C9orf47Q6ZRZ4 202 aa5.66□□□□□ -1.5
LINC01108-201ENST00000427276 MUSTN1Q8IVN3 82 aa5.66□□□□□ -1.5
LINC01108-201ENST00000427276 ZNF580Q9UK33 172 aa5.66□□□□□ -1.5
LINC01108-201ENST00000427276 MUC4Q99102 2169 aa5.66□□□□□ -1.5
LINC01108-201ENST00000427276 TEX49A0A1B0GTD5 131 aa5.66□□□□□ -1.5
LINC01108-201ENST00000427276 TMEM262E9PQX1 116 aa5.66□□□□□ -1.5
LINC01108-201ENST00000427276 CRYGDP07320 174 aa5.66□□□□□ -1.5
LINC01108-201ENST00000427276 GAGE5Q13069 117 aa5.66□□□□□ -1.5
LINC01108-201ENST00000427276 GAGE6Q13070 117 aa5.66□□□□□ -1.5
LINC01108-201ENST00000427276 C9orf139Q6ZV77 190 aa5.66□□□□□ -1.5
LINC01108-201ENST00000427276 Q8NA96 180 aa5.66□□□□□ -1.5
LINC01108-201ENST00000427276 LY6G5BQ8NDX9 201 aa5.66□□□□□ -1.5
LINC01108-201ENST00000427276 HRNRQ86YZ3 2850 aaPredicted RBP5.66□□□□□ -1.5
LINC01108-201ENST00000427276 CHD6Q8TD26 2715 aa5.66□□□□□ -1.5
LINC01108-201ENST00000427276 M0R1W7 72 aa5.65□□□□□ -1.5
LINC01108-201ENST00000427276 CRLF1O75462 422 aa5.65□□□□□ -1.5
LINC01108-201ENST00000427276 SUMO4Q6EEV6 95 aa5.65□□□□□ -1.5
LINC01108-201ENST00000427276 ZFAND2AQ8N6M9 145 aa5.65□□□□□ -1.5
LINC01108-201ENST00000427276 ATP6V0E2Q8NHE4 81 aa5.65□□□□□ -1.5
LINC01108-201ENST00000427276 ZNRF2Q8NHG8 242 aa5.65□□□□□ -1.5
LINC01108-201ENST00000427276 TRAV8-4A0A0B4J246 113 aa5.65□□□□□ -1.5
LINC01108-201ENST00000427276 A0A0J9YXV3 536 aa5.65□□□□□ -1.5
LINC01108-201ENST00000427276 ODF3BA8MYP8 253 aa5.65□□□□□ -1.5
LINC01108-201ENST00000427276 VCYO14598 125 aa5.65□□□□□ -1.5
LINC01108-201ENST00000427276 IGHV3-30P01768 117 aa5.65□□□□□ -1.5
LINC01108-201ENST00000427276 IGHV3-30-5P0DP03 117 aa5.65□□□□□ -1.5
LINC01108-201ENST00000427276 UBE2D3P61077 147 aa5.65□□□□□ -1.5
LINC01108-201ENST00000427276 UBE2D2P62837 147 aa5.65□□□□□ -1.5
LINC01108-201ENST00000427276 PSMG3-AS1Q96PY0 264 aa5.65□□□□□ -1.5
LINC01108-201ENST00000427276 FAM208BQ5VWN6 2430 aa5.65□□□□□ -1.5
LINC01108-201ENST00000427276 PRRC2AP48634 2157 aaKnown RBP5.65□□□□□ -1.51
LINC01108-201ENST00000427276 TRAV41A0A0B4J266 112 aa5.65□□□□□ -1.51
LINC01108-201ENST00000427276 TSHBP01222 138 aa5.65□□□□□ -1.51
LINC01108-201ENST00000427276 PAPPA-AS1Q5QFB9 102 aa5.65□□□□□ -1.51
LINC01108-201ENST00000427276 AJUBAQ96IF1 538 aa5.65□□□□□ -1.51
LINC01108-201ENST00000427276 KLK9Q9UKQ9 250 aa5.65□□□□□ -1.51
LINC01108-201ENST00000427276 IGLV4-69A0A075B6H9 119 aa5.64□□□□□ -1.51
LINC01108-201ENST00000427276 COX6B1P14854 86 aa5.64□□□□□ -1.51
LINC01108-201ENST00000427276 CDSNQ15517 529 aa5.64□□□□□ -1.51
LINC01108-201ENST00000427276 HIST2H2BCQ6DN03 193 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms