RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 TMEM178BH3BS89 294 aa9.64□□□□□ -0.87
HERC3-203ENST00000407637 PRRC2AP48634 2157 aaKnown RBP9.64□□□□□ -0.87
HERC3-203ENST00000407637 TRAV8-3A0A0A6YYJ7 113 aa9.64□□□□□ -0.87
HERC3-203ENST00000407637 ADARB2-AS1A8MUL3 147 aa9.64□□□□□ -0.87
HERC3-203ENST00000407637 CTSGP08311 255 aa9.64□□□□□ -0.87
HERC3-203ENST00000407637 MAFAQ8NHW3 353 aaPredicted RBP9.64□□□□□ -0.87
HERC3-203ENST00000407637 LST1O00453 97 aa9.63□□□□□ -0.87
HERC3-203ENST00000407637 IGF1P05019 195 aa9.63□□□□□ -0.87
HERC3-203ENST00000407637 C22orf34Q6ZV56 151 aa9.63□□□□□ -0.87
HERC3-203ENST00000407637 ABCA4P78363 2273 aa9.63□□□□□ -0.87
HERC3-203ENST00000407637 MUC4Q99102 2169 aa9.63□□□□□ -0.87
HERC3-203ENST00000407637 A0A0J9YXY3 114 aa9.63□□□□□ -0.87
HERC3-203ENST00000407637 A0A1W2PNU3 283 aaPredicted RBP9.63□□□□□ -0.87
HERC3-203ENST00000407637 COX6CP09669 75 aa9.63□□□□□ -0.87
HERC3-203ENST00000407637 COX7CP15954 63 aa9.63□□□□□ -0.87
HERC3-203ENST00000407637 S100A4P26447 101 aaKnown RBP9.63□□□□□ -0.87
HERC3-203ENST00000407637 TMEM141Q96I45 108 aa9.63□□□□□ -0.87
HERC3-203ENST00000407637 CYSTM1Q9H1C7 97 aa9.63□□□□□ -0.87
HERC3-203ENST00000407637 SIT1Q9Y3P8 196 aa9.63□□□□□ -0.87
HERC3-203ENST00000407637 PHLDA3Q9Y5J5 127 aa9.63□□□□□ -0.87
HERC3-203ENST00000407637 NPC2P61916 151 aa9.62□□□□□ -0.87
HERC3-203ENST00000407637 OPRPNQ99935 248 aaPredicted RBP9.62□□□□□ -0.87
HERC3-203ENST00000407637 hADV29S1A0JD25 119 aa9.62□□□□□ -0.87
HERC3-203ENST00000407637 PRSS2P07478 247 aa9.62□□□□□ -0.87
HERC3-203ENST00000407637 TIMM17AQ99595 171 aa9.62□□□□□ -0.87
HERC3-203ENST00000407637 IGHV3-49A0A0A0MS15 119 aa9.61□□□□□ -0.87
HERC3-203ENST00000407637 NBR2O15453 112 aa9.61□□□□□ -0.87
HERC3-203ENST00000407637 SEM1Q6ZVN7 128 aa9.61□□□□□ -0.87
HERC3-203ENST00000407637 KIR2DL5BQ8NHK3 375 aa9.61□□□□□ -0.87
HERC3-203ENST00000407637 LINC00643Q86TS7 51 aa9.61□□□□□ -0.87
HERC3-203ENST00000407637 C2orf48Q96LS8 159 aa9.61□□□□□ -0.87
HERC3-203ENST00000407637 I3L3M4 83 aa9.6□□□□□ -0.87
HERC3-203ENST00000407637 OVOL1O14753 267 aa9.6□□□□□ -0.87
HERC3-203ENST00000407637 BUB3O43684 328 aa9.6□□□□□ -0.87
HERC3-203ENST00000407637 RPS28P62857 69 aaKnown RBP9.6□□□□□ -0.87
HERC3-203ENST00000407637 NDPQ00604 133 aa9.6□□□□□ -0.87
HERC3-203ENST00000407637 CACNA1BQ00975 2339 aa9.6□□□□□ -0.87
HERC3-203ENST00000407637 ACYP1P07311 99 aa9.6□□□□□ -0.87
HERC3-203ENST00000407637 CRYGAP11844 174 aa9.6□□□□□ -0.87
HERC3-203ENST00000407637 LITAFQ99732 161 aa9.6□□□□□ -0.87
HERC3-203ENST00000407637 ATP5G1P05496 136 aa9.59□□□□□ -0.87
HERC3-203ENST00000407637 C9orf47Q6ZRZ4 202 aa9.59□□□□□ -0.87
HERC3-203ENST00000407637 SDHAF1A6NFY7 115 aa9.59□□□□□ -0.87
HERC3-203ENST00000407637 ASCL5Q7RTU5 278 aa9.59□□□□□ -0.87
HERC3-203ENST00000407637 DUX5Q96PT3 197 aa9.59□□□□□ -0.87
HERC3-203ENST00000407637 F5H768 121 aa9.58□□□□□ -0.88
HERC3-203ENST00000407637 PPP1R17O96001 155 aa9.58□□□□□ -0.88
HERC3-203ENST00000407637 OXTP01178 125 aa9.58□□□□□ -0.88
HERC3-203ENST00000407637 RNF5Q99942 180 aa9.58□□□□□ -0.88
HERC3-203ENST00000407637 B9A039 149 aa9.58□□□□□ -0.88
HERC3-203ENST00000407637 C4orf26Q17RF5 130 aa9.58□□□□□ -0.88
HERC3-203ENST00000407637 ADAMTSL4-AS1Q5T5F5 129 aa9.58□□□□□ -0.88
HERC3-203ENST00000407637 NACAE9PAV3 2078 aa9.57□□□□□ -0.88
HERC3-203ENST00000407637 A0A0J9YX75 114 aa9.57□□□□□ -0.88
HERC3-203ENST00000407637 POLR2KP53803 58 aaKnown RBP9.57□□□□□ -0.88
HERC3-203ENST00000407637 ZFAND3Q9H8U3 227 aa9.57□□□□□ -0.88
HERC3-203ENST00000407637 ZNF576Q9H609 170 aa9.57□□□□□ -0.88
HERC3-203ENST00000407637 CNOT1A5YKK6 2376 aaKnown RBP9.57□□□□□ -0.88
HERC3-203ENST00000407637 A0A0J9YXV3 536 aa9.56□□□□□ -0.88
HERC3-203ENST00000407637 SUMO4Q6EEV6 95 aa9.56□□□□□ -0.88
HERC3-203ENST00000407637 C5orf38Q86SI9 138 aa9.56□□□□□ -0.88
HERC3-203ENST00000407637 DCANP1Q8TF63 244 aa9.56□□□□□ -0.88
HERC3-203ENST00000407637 SPANXDQ9BXN6 97 aa9.56□□□□□ -0.88
HERC3-203ENST00000407637 LY6LH3BQJ8 138 aa9.56□□□□□ -0.88
HERC3-203ENST00000407637 GNRH2O43555 120 aa9.56□□□□□ -0.88
HERC3-203ENST00000407637 FAM27E3Q08E93 113 aa9.56□□□□□ -0.88
HERC3-203ENST00000407637 RHOHQ15669 191 aa9.56□□□□□ -0.88
HERC3-203ENST00000407637 HRCT1Q6UXD1 115 aa9.56□□□□□ -0.88
HERC3-203ENST00000407637 DPH3Q96FX2 82 aa9.56□□□□□ -0.88
HERC3-203ENST00000407637 JPT2Q9H910 190 aa9.56□□□□□ -0.88
HERC3-203ENST00000407637 TRAV12-3A0A0B4J271 114 aa9.55□□□□□ -0.88
HERC3-203ENST00000407637 VCYO14598 125 aa9.55□□□□□ -0.88
HERC3-203ENST00000407637 TRACP01848 142 aa9.55□□□□□ -0.88
HERC3-203ENST00000407637 IGHV3-30-3P0DP02 117 aa9.55□□□□□ -0.88
HERC3-203ENST00000407637 LINC00315P59091 139 aa9.55□□□□□ -0.88
HERC3-203ENST00000407637 DSCR8Q96T75 97 aa9.55□□□□□ -0.88
HERC3-203ENST00000407637 ADGRG4Q8IZF6 3080 aa9.55□□□□□ -0.88
HERC3-203ENST00000407637 CLPSL1A2RUU4 121 aa9.55□□□□□ -0.88
HERC3-203ENST00000407637 KAAG1Q9UBP8 84 aa9.55□□□□□ -0.88
HERC3-203ENST00000407637 DEFB1P60022 68 aa9.54□□□□□ -0.88
HERC3-203ENST00000407637 TMEM61Q8N0U2 210 aa9.54□□□□□ -0.88
HERC3-203ENST00000407637 ZFAND2AQ8N6M9 145 aa9.54□□□□□ -0.88
HERC3-203ENST00000407637 A0A087WWL8 130 aa9.54□□□□□ -0.88
HERC3-203ENST00000407637 TRBV7-1A0A0A6YYK4 115 aa9.54□□□□□ -0.88
HERC3-203ENST00000407637 TRAV21A0A0B4J279 112 aa9.54□□□□□ -0.88
HERC3-203ENST00000407637 RNASE3P12724 160 aaKnown RBP9.54□□□□□ -0.88
HERC3-203ENST00000407637 CXCL5P42830 114 aa9.54□□□□□ -0.88
HERC3-203ENST00000407637 MRPL53Q96EL3 112 aaKnown RBP9.54□□□□□ -0.88
HERC3-203ENST00000407637 TIMM21Q9BVV7 248 aa9.54□□□□□ -0.88
HERC3-203ENST00000407637 KIF25-AS1Q9Y6Z4 181 aa9.54□□□□□ -0.88
HERC3-203ENST00000407637 MAP1BP46821 2468 aaKnown RBP9.54□□□□□ -0.88
HERC3-203ENST00000407637 IGHV4OR15-8A0A075B7B6 117 aa9.53□□□□□ -0.88
HERC3-203ENST00000407637 A0A087WW49 117 aa9.53□□□□□ -0.88
HERC3-203ENST00000407637 MBD3L4A6NDZ8 208 aaPredicted RBP9.53□□□□□ -0.88
HERC3-203ENST00000407637 MBD3L3A6NE82 208 aaPredicted RBP9.53□□□□□ -0.88
HERC3-203ENST00000407637 MBD3L5A6NJ08 208 aaPredicted RBP9.53□□□□□ -0.88
HERC3-203ENST00000407637 F5H697 171 aa9.53□□□□□ -0.88
HERC3-203ENST00000407637 ATOX1O00244 68 aa9.53□□□□□ -0.88
HERC3-203ENST00000407637 NSUN5P1Q3KNT7 163 aa9.53□□□□□ -0.88
HERC3-203ENST00000407637 NUP37Q8NFH4 326 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms