RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 IGLV10-54A0A075B6I4 117 aa10.93□□□□□ -0.66
COL4A3-202ENST00000396578 G3V4G9 280 aa10.93□□□□□ -0.66
COL4A3-202ENST00000396578 SEM1Q6ZVN7 128 aa10.93□□□□□ -0.66
COL4A3-202ENST00000396578 IGLV1-44P01699 117 aa10.92□□□□□ -0.66
COL4A3-202ENST00000396578 TRBV10-2A0A0K0K1G8 114 aa10.92□□□□□ -0.66
COL4A3-202ENST00000396578 FXYD2P54710 66 aa10.92□□□□□ -0.66
COL4A3-202ENST00000396578 MRPL23Q16540 153 aaKnown RBP10.92□□□□□ -0.66
COL4A3-202ENST00000396578 ATP6V0E2Q8NHE4 81 aa10.92□□□□□ -0.66
COL4A3-202ENST00000396578 KAAG1Q9UBP8 84 aa10.92□□□□□ -0.66
COL4A3-202ENST00000396578 CRIPAKQ8N1N5 446 aa10.92□□□□□ -0.66
COL4A3-202ENST00000396578 VPREB3Q9UKI3 123 aa10.92□□□□□ -0.66
COL4A3-202ENST00000396578 PRR30Q53SZ7 412 aaPredicted RBP10.92□□□□□ -0.66
COL4A3-202ENST00000396578 TDRG1Q3Y452 100 aa10.91□□□□□ -0.66
COL4A3-202ENST00000396578 ANKRD39Q53RE8 183 aa10.91□□□□□ -0.66
COL4A3-202ENST00000396578 TOMM6Q96B49 74 aa10.91□□□□□ -0.66
COL4A3-202ENST00000396578 TRBV7-3A0A075B6L6 115 aa10.91□□□□□ -0.66
COL4A3-202ENST00000396578 C4orf48Q5BLP8 95 aa10.91□□□□□ -0.66
COL4A3-202ENST00000396578 DAND5Q8N907 189 aa10.91□□□□□ -0.66
COL4A3-202ENST00000396578 NCR3O14931 201 aa10.91□□□□□ -0.66
COL4A3-202ENST00000396578 UBE2AP49459 152 aa10.91□□□□□ -0.66
COL4A3-202ENST00000396578 K7ENP7 123 aa10.9□□□□□ -0.66
COL4A3-202ENST00000396578 TRBV12-3P01733 135 aa10.9□□□□□ -0.66
COL4A3-202ENST00000396578 H3BT86 120 aa10.9□□□□□ -0.66
COL4A3-202ENST00000396578 E9PLD3 99 aa10.89□□□□□ -0.67
COL4A3-202ENST00000396578 CLEC2BQ92478 149 aa10.89□□□□□ -0.67
COL4A3-202ENST00000396578 TAX1BP3O14907 124 aa10.89□□□□□ -0.67
COL4A3-202ENST00000396578 IGLV2-23P01705 113 aa10.89□□□□□ -0.67
COL4A3-202ENST00000396578 ZNF503-AS2A6NEH8 195 aa10.89□□□□□ -0.67
COL4A3-202ENST00000396578 APRG1Q8IVJ8 170 aa10.89□□□□□ -0.67
COL4A3-202ENST00000396578 LECT2O14960 151 aa10.89□□□□□ -0.67
COL4A3-202ENST00000396578 NDUFA1O15239 70 aa10.89□□□□□ -0.67
COL4A3-202ENST00000396578 CXCL5P42830 114 aa10.89□□□□□ -0.67
COL4A3-202ENST00000396578 LINC00173Q6ZV60 143 aa10.89□□□□□ -0.67
COL4A3-202ENST00000396578 PDE6GP18545 87 aa10.89□□□□□ -0.67
COL4A3-202ENST00000396578 DIRC1Q969H9 104 aa10.89□□□□□ -0.67
COL4A3-202ENST00000396578 CCL18P55774 89 aa10.88□□□□□ -0.67
COL4A3-202ENST00000396578 RNASE8Q8TDE3 154 aaKnown RBP10.88□□□□□ -0.67
COL4A3-202ENST00000396578 IGFL3Q6UXB1 125 aa10.88□□□□□ -0.67
COL4A3-202ENST00000396578 Q71RC1 249 aaPredicted RBP10.88□□□□□ -0.67
COL4A3-202ENST00000396578 A0A0J9YXV3 536 aa10.88□□□□□ -0.67
COL4A3-202ENST00000396578 AGRNO00468 2067 aa10.88□□□□□ -0.67
COL4A3-202ENST00000396578 SPART-AS1P0CW21 52 aa10.88□□□□□ -0.67
COL4A3-202ENST00000396578 GP9P14770 177 aa10.88□□□□□ -0.67
COL4A3-202ENST00000396578 LTBP1Q14766 1721 aa10.88□□□□□ -0.67
COL4A3-202ENST00000396578 C11orf86A6NJI1 115 aa10.87□□□□□ -0.67
COL4A3-202ENST00000396578 IGLV3-1P01715 115 aa10.87□□□□□ -0.67
COL4A3-202ENST00000396578 DEFB136Q30KP8 78 aa10.87□□□□□ -0.67
COL4A3-202ENST00000396578 SPTSSBQ8NFR3 76 aa10.87□□□□□ -0.67
COL4A3-202ENST00000396578 H0Y9J4 135 aa10.87□□□□□ -0.67
COL4A3-202ENST00000396578 C9orf66Q5T8R8 295 aa10.87□□□□□ -0.67
COL4A3-202ENST00000396578 SPRY2O43597 315 aa10.87□□□□□ -0.67
COL4A3-202ENST00000396578 RPL39P62891 51 aaKnown RBP10.87□□□□□ -0.67
COL4A3-202ENST00000396578 RNF183Q96D59 192 aa10.87□□□□□ -0.67
COL4A3-202ENST00000396578 THSD7BQ9C0I4 1608 aa10.86□□□□□ -0.67
COL4A3-202ENST00000396578 FGF23Q9GZV9 251 aaPredicted RBP10.86□□□□□ -0.67
COL4A3-202ENST00000396578 PROK2Q9HC23 129 aa10.86□□□□□ -0.67
COL4A3-202ENST00000396578 HHLA3Q9XRX5 114 aa10.86□□□□□ -0.67
COL4A3-202ENST00000396578 IGHV3-30P01768 117 aa10.86□□□□□ -0.67
COL4A3-202ENST00000396578 IGHV3-33P01772 117 aa10.86□□□□□ -0.67
COL4A3-202ENST00000396578 IGHV3-30-3P0DP02 117 aa10.86□□□□□ -0.67
COL4A3-202ENST00000396578 IGHV3-30-5P0DP03 117 aa10.86□□□□□ -0.67
COL4A3-202ENST00000396578 NPBQ8NG41 125 aa10.86□□□□□ -0.67
COL4A3-202ENST00000396578 UPK3BQ9BT76 320 aa10.86□□□□□ -0.67
COL4A3-202ENST00000396578 WI2-2373I1.2A0A1W2PRP0 233 aa10.85□□□□□ -0.67
COL4A3-202ENST00000396578 NUPR1O60356 82 aa10.85□□□□□ -0.67
COL4A3-202ENST00000396578 COL4A6Q14031 1691 aa10.85□□□□□ -0.67
COL4A3-202ENST00000396578 IGKV4-1P06312 121 aa10.85□□□□□ -0.67
COL4A3-202ENST00000396578 SLURP1P55000 103 aa10.85□□□□□ -0.67
COL4A3-202ENST00000396578 RSPO1Q2MKA7 263 aaPredicted RBP10.85□□□□□ -0.67
COL4A3-202ENST00000396578 GTSF1Q8WW33 167 aa10.85□□□□□ -0.67
COL4A3-202ENST00000396578 IGHV4-59P01825 116 aa10.84□□□□□ -0.67
COL4A3-202ENST00000396578 TRAV26-1A0A087WT03 109 aa10.84□□□□□ -0.67
COL4A3-202ENST00000396578 NUP210LQ5VU65 1888 aa10.84□□□□□ -0.67
COL4A3-202ENST00000396578 TRAV23DV6A0A075B6W5 121 aa10.84□□□□□ -0.67
COL4A3-202ENST00000396578 I3L2K1 104 aa10.84□□□□□ -0.67
COL4A3-202ENST00000396578 C16orf54Q6UWD8 224 aa10.84□□□□□ -0.67
COL4A3-202ENST00000396578 LINC00643Q86TS7 51 aa10.84□□□□□ -0.67
COL4A3-202ENST00000396578 Q6ZUT4 128 aa10.84□□□□□ -0.67
COL4A3-202ENST00000396578 FAM110AQ9BQ89 295 aa10.83□□□□□ -0.67
COL4A3-202ENST00000396578 ODF1Q14990 250 aa10.83□□□□□ -0.68
COL4A3-202ENST00000396578 DEFB112Q30KQ8 113 aa10.83□□□□□ -0.68
COL4A3-202ENST00000396578 MRPL55Q7Z7F7 128 aaKnown RBP10.83□□□□□ -0.68
COL4A3-202ENST00000396578 Q8N1Y9 231 aa10.83□□□□□ -0.68
COL4A3-202ENST00000396578 PIFOQ8TCI5 191 aa10.83□□□□□ -0.68
COL4A3-202ENST00000396578 MSRB1Q9NZV6 116 aa10.83□□□□□ -0.68
COL4A3-202ENST00000396578 IGHV1-58A0A0C4DH39 117 aa10.82□□□□□ -0.68
COL4A3-202ENST00000396578 MPLKIPQ8TAP9 179 aa10.82□□□□□ -0.68
COL4A3-202ENST00000396578 CTRLP40313 264 aa10.82□□□□□ -0.68
COL4A3-202ENST00000396578 K7EIM0 57 aa10.82□□□□□ -0.68
COL4A3-202ENST00000396578 IGLV11-55A0A075B6I3 123 aa10.82□□□□□ -0.68
COL4A3-202ENST00000396578 NDUFV3P56181 108 aaKnown RBP10.82□□□□□ -0.68
COL4A3-202ENST00000396578 MIR7-3HGQ8N6C7 128 aa10.82□□□□□ -0.68
COL4A3-202ENST00000396578 ATG2AQ2TAZ0 1938 aa10.82□□□□□ -0.68
COL4A3-202ENST00000396578 IGKV2D-26A0A0A0MRZ7 120 aa10.81□□□□□ -0.68
COL4A3-202ENST00000396578 CENPVL3A0A0U1RRI6 287 aa10.81□□□□□ -0.68
COL4A3-202ENST00000396578 Q8NFD4 153 aa10.81□□□□□ -0.68
COL4A3-202ENST00000396578 MED14OSP0DP75 135 aa10.81□□□□□ -0.68
COL4A3-202ENST00000396578 WISP1O95388 367 aa10.81□□□□□ -0.68
COL4A3-202ENST00000396578 TM2D2Q9BX73 214 aa10.81□□□□□ -0.68
COL4A3-202ENST00000396578 TEX22C9J3V5 150 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms