RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 HERV-K104P63124 156 aa8.45□□□□□ -1.06
LINC00654-201ENST00000379053 LGALS9BQ3B8N2 356 aa8.45□□□□□ -1.06
LINC00654-201ENST00000379053 LGALS9CQ6DKI2 356 aa8.45□□□□□ -1.06
LINC00654-201ENST00000379053 FGF23Q9GZV9 251 aaPredicted RBP8.45□□□□□ -1.06
LINC00654-201ENST00000379053 A6NDX4 124 aa8.44□□□□□ -1.06
LINC00654-201ENST00000379053 C11orf52Q96A22 123 aa8.44□□□□□ -1.06
LINC00654-201ENST00000379053 TANC1Q9C0D5 1861 aa8.44□□□□□ -1.06
LINC00654-201ENST00000379053 Q8N1Y9 231 aa8.44□□□□□ -1.06
LINC00654-201ENST00000379053 PRO1854Q9UHT4 67 aa8.44□□□□□ -1.06
LINC00654-201ENST00000379053 LY6G6CO95867 125 aa8.44□□□□□ -1.06
LINC00654-201ENST00000379053 VSIG2Q96IQ7 327 aa8.44□□□□□ -1.06
LINC00654-201ENST00000379053 IGHV4-31P0DP07 118 aa8.44□□□□□ -1.06
LINC00654-201ENST00000379053 TNFRSF13BO14836 293 aaPredicted RBP8.43□□□□□ -1.06
LINC00654-201ENST00000379053 FUSP35637 526 aaKnown RBP eCLIP8.43□□□□□ -1.06
LINC00654-201ENST00000379053 BVES-AS1Q5T3Y7 98 aa8.43□□□□□ -1.06
LINC00654-201ENST00000379053 PTPRDP23468 1912 aa8.43□□□□□ -1.06
LINC00654-201ENST00000379053 A0A1W2PPM0 123 aa8.43□□□□□ -1.06
LINC00654-201ENST00000379053 WISP2O76076 250 aa8.43□□□□□ -1.06
LINC00654-201ENST00000379053 COX8AP10176 69 aa8.43□□□□□ -1.06
LINC00654-201ENST00000379053 H3BMG7 143 aa8.43□□□□□ -1.06
LINC00654-201ENST00000379053 RPL39LQ96EH5 51 aaKnown RBP8.43□□□□□ -1.06
LINC00654-201ENST00000379053 TRBV7-3A0A075B6L6 115 aa8.42□□□□□ -1.06
LINC00654-201ENST00000379053 UTF1Q5T230 341 aa8.42□□□□□ -1.06
LINC00654-201ENST00000379053 CARD19Q96LW7 228 aa8.42□□□□□ -1.06
LINC00654-201ENST00000379053 PLXNA4Q9HCM2 1894 aa8.42□□□□□ -1.06
LINC00654-201ENST00000379053 SIP14410 1827 aa8.42□□□□□ -1.06
LINC00654-201ENST00000379053 B5MCH6 92 aa8.42□□□□□ -1.06
LINC00654-201ENST00000379053 K7EMI3 77 aa8.42□□□□□ -1.06
LINC00654-201ENST00000379053 IGLV1-47P01700 117 aa8.42□□□□□ -1.06
LINC00654-201ENST00000379053 GATA1P15976 413 aaPredicted RBP8.42□□□□□ -1.06
LINC00654-201ENST00000379053 PROP1O75360 226 aa8.42□□□□□ -1.06
LINC00654-201ENST00000379053 TRACP01848 142 aa8.42□□□□□ -1.06
LINC00654-201ENST00000379053 PRO0255Q9UI72 69 aa8.42□□□□□ -1.06
LINC00654-201ENST00000379053 IGHV4-28A0A0C4DH34 117 aa8.41□□□□□ -1.06
LINC00654-201ENST00000379053 WIPF3A6NGB9 483 aa8.41□□□□□ -1.06
LINC00654-201ENST00000379053 NDUFB1O75438 58 aa8.41□□□□□ -1.06
LINC00654-201ENST00000379053 HEATR5AQ86XA9 2040 aa8.41□□□□□ -1.06
LINC00654-201ENST00000379053 ANKHD1Q8IWZ3 2542 aaKnown RBP8.41□□□□□ -1.06
LINC00654-201ENST00000379053 C10orf91Q5T1B1 145 aa8.41□□□□□ -1.06
LINC00654-201ENST00000379053 ORMDL1Q9P0S3 153 aa8.41□□□□□ -1.06
LINC00654-201ENST00000379053 DKK2Q9UBU2 259 aa8.41□□□□□ -1.06
LINC00654-201ENST00000379053 LMO4P61968 165 aa8.41□□□□□ -1.06
LINC00654-201ENST00000379053 SPAG11BQ08648 103 aa8.41□□□□□ -1.06
LINC00654-201ENST00000379053 COX7B2Q8TF08 81 aa8.41□□□□□ -1.06
LINC00654-201ENST00000379053 IGKV2-24A0A0C4DH68 120 aa8.4□□□□□ -1.06
LINC00654-201ENST00000379053 NOTCH4Q99466 2003 aa8.4□□□□□ -1.06
LINC00654-201ENST00000379053 TRBV12-3P01733 135 aa8.4□□□□□ -1.06
LINC00654-201ENST00000379053 TMEM263Q8WUH6 116 aaKnown RBP8.4□□□□□ -1.06
LINC00654-201ENST00000379053 KRTAP27-1Q3LI81 207 aa8.4□□□□□ -1.07
LINC00654-201ENST00000379053 PLXND1Q9Y4D7 1925 aa8.4□□□□□ -1.07
LINC00654-201ENST00000379053 Q6ZVH6 145 aa8.4□□□□□ -1.07
LINC00654-201ENST00000379053 MAP6D1Q9H9H5 199 aa8.4□□□□□ -1.07
LINC00654-201ENST00000379053 SS18L2Q9UHA2 77 aa8.4□□□□□ -1.07
LINC00654-201ENST00000379053 PRAC2D3DTV9 90 aa8.39□□□□□ -1.07
LINC00654-201ENST00000379053 DEFB1P60022 68 aa8.39□□□□□ -1.07
LINC00654-201ENST00000379053 C9orf47Q6ZRZ4 202 aa8.39□□□□□ -1.07
LINC00654-201ENST00000379053 TEX22C9J3V5 150 aa8.39□□□□□ -1.07
LINC00654-201ENST00000379053 Q6YL49 198 aa8.39□□□□□ -1.07
LINC00654-201ENST00000379053 SND1-IT1Q9HBX3 110 aa8.39□□□□□ -1.07
LINC00654-201ENST00000379053 UNQ9165/PRO28630Q6UXU0 137 aa8.39□□□□□ -1.07
LINC00654-201ENST00000379053 NFE4Q86UQ8 179 aa8.39□□□□□ -1.07
LINC00654-201ENST00000379053 ODF3L1Q8IXM7 274 aa8.39□□□□□ -1.07
LINC00654-201ENST00000379053 SPANXDQ9BXN6 97 aa8.39□□□□□ -1.07
LINC00654-201ENST00000379053 HELZP42694 1942 aaKnown RBP8.39□□□□□ -1.07
LINC00654-201ENST00000379053 PIEZO1Q92508 2521 aa8.39□□□□□ -1.07
LINC00654-201ENST00000379053 MYLKQ15746 1914 aa8.39□□□□□ -1.07
LINC00654-201ENST00000379053 A0A0J9YXV3 536 aa8.38□□□□□ -1.07
LINC00654-201ENST00000379053 K7ERJ3 54 aa8.38□□□□□ -1.07
LINC00654-201ENST00000379053 CDPF1Q6NVV7 123 aa8.38□□□□□ -1.07
LINC00654-201ENST00000379053 ZFP2Q6ZN57 461 aa8.38□□□□□ -1.07
LINC00654-201ENST00000379053 LRCOL1A6NCL2 159 aa8.38□□□□□ -1.07
LINC00654-201ENST00000379053 K7EN84 100 aa8.38□□□□□ -1.07
LINC00654-201ENST00000379053 CCL25O15444 150 aa8.38□□□□□ -1.07
LINC00654-201ENST00000379053 C7orf33Q8WU49 177 aa8.38□□□□□ -1.07
LINC00654-201ENST00000379053 WI2-2373I1.2A0A1W2PRP0 233 aa8.38□□□□□ -1.07
LINC00654-201ENST00000379053 TRAV26-1A0A087WT03 109 aa8.37□□□□□ -1.07
LINC00654-201ENST00000379053 NCR3O14931 201 aa8.37□□□□□ -1.07
LINC00654-201ENST00000379053 GTSF1Q8WW33 167 aa8.37□□□□□ -1.07
LINC00654-201ENST00000379053 DEFB131BA0A096LNP1 70 aa8.37□□□□□ -1.07
LINC00654-201ENST00000379053 MSMPQ1L6U9 139 aa8.37□□□□□ -1.07
LINC00654-201ENST00000379053 CEND1Q8N111 149 aa8.37□□□□□ -1.07
LINC00654-201ENST00000379053 MSRB1Q9NZV6 116 aa8.37□□□□□ -1.07
LINC00654-201ENST00000379053 SMIM20Q8N5G0 67 aa8.37□□□□□ -1.07
LINC00654-201ENST00000379053 FAM110AQ9BQ89 295 aa8.37□□□□□ -1.07
LINC00654-201ENST00000379053 PATE2Q6UY27 113 aa8.37□□□□□ -1.07
LINC00654-201ENST00000379053 OPRPNQ99935 248 aaPredicted RBP8.37□□□□□ -1.07
LINC00654-201ENST00000379053 HIVEP3Q5T1R4 2406 aa8.37□□□□□ -1.07
LINC00654-201ENST00000379053 A0A0J9YX75 114 aa8.36□□□□□ -1.07
LINC00654-201ENST00000379053 NTN5Q8WTR8 489 aaPredicted RBP8.36□□□□□ -1.07
LINC00654-201ENST00000379053 PRSS47A8MTI9 375 aa8.36□□□□□ -1.07
LINC00654-201ENST00000379053 CXCL5P42830 114 aa8.36□□□□□ -1.07
LINC00654-201ENST00000379053 CRYBA4P53673 196 aa8.36□□□□□ -1.07
LINC00654-201ENST00000379053 ANKRD29Q8N6D5 301 aa8.36□□□□□ -1.07
LINC00654-201ENST00000379053 CCDC168Q8NDH2 2452 aa8.36□□□□□ -1.07
LINC00654-201ENST00000379053 TSC2P49815 1807 aa8.36□□□□□ -1.07
LINC00654-201ENST00000379053 RBM3P98179 157 aaKnown RBP8.36□□□□□ -1.07
LINC00654-201ENST00000379053 B9D2Q9BPU9 175 aa8.36□□□□□ -1.07
LINC00654-201ENST00000379053 EML6Q6ZMW3 1958 aa8.35□□□□□ -1.07
LINC00654-201ENST00000379053 BAALC-AS2P0C853 105 aa8.35□□□□□ -1.07
LINC00654-201ENST00000379053 DOPEY1Q5JWR5 2465 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms