RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 CRLF1O75462 422 aa8.55□□□□□ -1.04
POLR1B-202ENST00000333990 NDUFAF3Q9BU61 184 aa8.55□□□□□ -1.04
POLR1B-202ENST00000333990 ATP6V0E2Q8NHE4 81 aa8.55□□□□□ -1.04
POLR1B-202ENST00000333990 ORAOV1Q8WV07 137 aa8.55□□□□□ -1.04
POLR1B-202ENST00000333990 TMEM263Q8WUH6 116 aaKnown RBP8.54□□□□□ -1.04
POLR1B-202ENST00000333990 CPAMD8Q8IZJ3 1885 aa8.54□□□□□ -1.04
POLR1B-202ENST00000333990 NDUFA7O95182 113 aa8.54□□□□□ -1.04
POLR1B-202ENST00000333990 C2CD3Q4AC94 2353 aa8.54□□□□□ -1.04
POLR1B-202ENST00000333990 HERVK_113P63121 156 aa8.54□□□□□ -1.04
POLR1B-202ENST00000333990 AVPP01185 164 aa8.53□□□□□ -1.04
POLR1B-202ENST00000333990 GYPEP15421 78 aa8.53□□□□□ -1.04
POLR1B-202ENST00000333990 DAZ2Q13117 558 aaKnown RBP8.53□□□□□ -1.04
POLR1B-202ENST00000333990 DAZ4Q86SG3 579 aaKnown RBP8.53□□□□□ -1.04
POLR1B-202ENST00000333990 CST9LQ9H4G1 147 aa8.53□□□□□ -1.04
POLR1B-202ENST00000333990 DAZ3Q9NR90 486 aaKnown RBP8.53□□□□□ -1.04
POLR1B-202ENST00000333990 A0A096LPF7 62 aa8.53□□□□□ -1.04
POLR1B-202ENST00000333990 SMIM9A6NGZ8 99 aa8.53□□□□□ -1.04
POLR1B-202ENST00000333990 K7EQD1 137 aa8.53□□□□□ -1.04
POLR1B-202ENST00000333990 NEGR1Q7Z3B1 354 aa8.53□□□□□ -1.04
POLR1B-202ENST00000333990 ZFAND3Q9H8U3 227 aa8.53□□□□□ -1.04
POLR1B-202ENST00000333990 F8VRH5 84 aa8.53□□□□□ -1.04
POLR1B-202ENST00000333990 SPANXA1Q9NS26 97 aa8.53□□□□□ -1.04
POLR1B-202ENST00000333990 PLA2G2EQ9NZK7 142 aa8.53□□□□□ -1.04
POLR1B-202ENST00000333990 ERG28Q9UKR5 140 aa8.53□□□□□ -1.04
POLR1B-202ENST00000333990 SETD2Q9BYW2 2564 aaPredicted RBP8.53□□□□□ -1.04
POLR1B-202ENST00000333990 ZNF503Q96F45 646 aa8.52□□□□□ -1.04
POLR1B-202ENST00000333990 LEPROTO15243 131 aa8.52□□□□□ -1.05
POLR1B-202ENST00000333990 ASPHD1Q5U4P2 390 aa8.52□□□□□ -1.05
POLR1B-202ENST00000333990 DEFB125Q8N687 156 aa8.52□□□□□ -1.05
POLR1B-202ENST00000333990 KLK5Q9Y337 293 aaPredicted RBP8.52□□□□□ -1.05
POLR1B-202ENST00000333990 LGALS9BQ3B8N2 356 aa8.52□□□□□ -1.05
POLR1B-202ENST00000333990 LGALS9CQ6DKI2 356 aa8.52□□□□□ -1.05
POLR1B-202ENST00000333990 IGLV1-40P01703 118 aa8.52□□□□□ -1.05
POLR1B-202ENST00000333990 TNRC6BQ9UPQ9 1833 aaKnown RBP8.51□□□□□ -1.05
POLR1B-202ENST00000333990 H3BMM0 161 aa8.51□□□□□ -1.05
POLR1B-202ENST00000333990 ESDP10768 282 aa8.51□□□□□ -1.05
POLR1B-202ENST00000333990 PKIGQ9Y2B9 76 aa8.51□□□□□ -1.05
POLR1B-202ENST00000333990 hDV102S1A0JD36 115 aa8.51□□□□□ -1.05
POLR1B-202ENST00000333990 C1orf43Q9BWL3 253 aa8.51□□□□□ -1.05
POLR1B-202ENST00000333990 CTRLP40313 264 aa8.51□□□□□ -1.05
POLR1B-202ENST00000333990 SUMO4Q6EEV6 95 aa8.5□□□□□ -1.05
POLR1B-202ENST00000333990 ADAMTS20P59510 1910 aa8.5□□□□□ -1.05
POLR1B-202ENST00000333990 SPCS1Q9Y6A9 102 aa8.5□□□□□ -1.05
POLR1B-202ENST00000333990 MTORP42345 2549 aa8.5□□□□□ -1.05
POLR1B-202ENST00000333990 TRBV10-1A0A0K0K1A3 114 aa8.5□□□□□ -1.05
POLR1B-202ENST00000333990 SPRY2O43597 315 aa8.5□□□□□ -1.05
POLR1B-202ENST00000333990 PRO0255Q9UI72 69 aa8.5□□□□□ -1.05
POLR1B-202ENST00000333990 HHLA3Q9XRX5 114 aa8.5□□□□□ -1.05
POLR1B-202ENST00000333990 PTPRBP23467 1997 aa8.49□□□□□ -1.05
POLR1B-202ENST00000333990 TRBV7-3A0A075B6L6 115 aa8.49□□□□□ -1.05
POLR1B-202ENST00000333990 C10orf99Q6UWK7 81 aa8.49□□□□□ -1.05
POLR1B-202ENST00000333990 DEFB1P60022 68 aa8.49□□□□□ -1.05
POLR1B-202ENST00000333990 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.49□□□□□ -1.05
POLR1B-202ENST00000333990 UBE2WQ96B02 151 aa8.49□□□□□ -1.05
POLR1B-202ENST00000333990 ZNF580Q9UK33 172 aa8.49□□□□□ -1.05
POLR1B-202ENST00000333990 SFTA2Q6UW10 78 aa8.48□□□□□ -1.05
POLR1B-202ENST00000333990 IGKV2D-24A0A075B6R9 120 aa8.48□□□□□ -1.05
POLR1B-202ENST00000333990 H3BUT2 72 aa8.48□□□□□ -1.05
POLR1B-202ENST00000333990 ZNF479Q96JC4 524 aa8.48□□□□□ -1.05
POLR1B-202ENST00000333990 A0A1B0GV90 55 aa8.48□□□□□ -1.05
POLR1B-202ENST00000333990 MSRB1Q9NZV6 116 aa8.48□□□□□ -1.05
POLR1B-202ENST00000333990 C19orf71A6NCJ1 209 aa8.47□□□□□ -1.05
POLR1B-202ENST00000333990 CRIP2P52943 208 aaPredicted RBP8.47□□□□□ -1.05
POLR1B-202ENST00000333990 PYY3Q5JQD4 70 aa8.47□□□□□ -1.05
POLR1B-202ENST00000333990 SPATA25Q9BR10 227 aa8.47□□□□□ -1.05
POLR1B-202ENST00000333990 MRPL35Q9NZE8 188 aaKnown RBP8.47□□□□□ -1.05
POLR1B-202ENST00000333990 A0A1B0GWB2 263 aa8.47□□□□□ -1.05
POLR1B-202ENST00000333990 IGLL1P15814 213 aa8.47□□□□□ -1.05
POLR1B-202ENST00000333990 OVOL2Q9BRP0 275 aa8.47□□□□□ -1.05
POLR1B-202ENST00000333990 NDUFA12Q9UI09 145 aa8.47□□□□□ -1.05
POLR1B-202ENST00000333990 TRAV4A0A0B4J268 109 aa8.47□□□□□ -1.05
POLR1B-202ENST00000333990 LYRM9A8MSI8 78 aa8.47□□□□□ -1.05
POLR1B-202ENST00000333990 STPG4Q8N801 248 aa8.46□□□□□ -1.05
POLR1B-202ENST00000333990 ZNF625Q96I27 306 aaPredicted RBP8.46□□□□□ -1.05
POLR1B-202ENST00000333990 RAI1Q7Z5J4 1906 aaPredicted RBP8.46□□□□□ -1.06
POLR1B-202ENST00000333990 C11orf45Q8TAV5 145 aa8.46□□□□□ -1.06
POLR1B-202ENST00000333990 GTSF1Q8WW33 167 aa8.46□□□□□ -1.06
POLR1B-202ENST00000333990 NPC2P61916 151 aa8.45□□□□□ -1.06
POLR1B-202ENST00000333990 ATXN8Q156A1 80 aa8.45□□□□□ -1.06
POLR1B-202ENST00000333990 NKAPP1Q8N9T2 125 aa8.45□□□□□ -1.06
POLR1B-202ENST00000333990 RPL39LQ96EH5 51 aaKnown RBP8.45□□□□□ -1.06
POLR1B-202ENST00000333990 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.45□□□□□ -1.06
POLR1B-202ENST00000333990 IGKV2-29A2NJV5 120 aaPredicted RBP8.45□□□□□ -1.06
POLR1B-202ENST00000333990 BRI3O95415 125 aa8.45□□□□□ -1.06
POLR1B-202ENST00000333990 MIFP14174 115 aa8.45□□□□□ -1.06
POLR1B-202ENST00000333990 Q6ZQT7 251 aa8.45□□□□□ -1.06
POLR1B-202ENST00000333990 MDFICQ9P1T7 246 aa8.45□□□□□ -1.06
POLR1B-202ENST00000333990 F8W735 103 aaPredicted RBP8.45□□□□□ -1.06
POLR1B-202ENST00000333990 GATD1Q8NB37 220 aa8.45□□□□□ -1.06
POLR1B-202ENST00000333990 SMR3AQ99954 134 aa8.45□□□□□ -1.06
POLR1B-202ENST00000333990 GATA1P15976 413 aaPredicted RBP8.45□□□□□ -1.06
POLR1B-202ENST00000333990 PFN2P35080 140 aa8.45□□□□□ -1.06
POLR1B-202ENST00000333990 AMTNQ6UX39 209 aa8.45□□□□□ -1.06
POLR1B-202ENST00000333990 ZFP2Q6ZN57 461 aa8.45□□□□□ -1.06
POLR1B-202ENST00000333990 Q6ZS46 218 aa8.45□□□□□ -1.06
POLR1B-202ENST00000333990 TM2D2Q9BX73 214 aa8.45□□□□□ -1.06
POLR1B-202ENST00000333990 PRSS29PA6NIE9 313 aa8.44□□□□□ -1.06
POLR1B-202ENST00000333990 SCGB1A1P11684 91 aa8.44□□□□□ -1.06
POLR1B-202ENST00000333990 ZNF747Q9BV97 191 aa8.44□□□□□ -1.06
POLR1B-202ENST00000333990 Q9HAA7 133 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms