RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Igkv4-50A0A0B4J1J0 117 aa11.8□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Gm45871A0A1B0GRI9 540 aa11.8□□□□□ -0.52
Col3a1-201ENSMUST00000087883 B430218F22RikQ8BQR5 223 aa11.8□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Map1bP14873 2464 aaKnown RBP11.8□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Dock11A2AF47 2073 aa11.8□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Trav7n-5A0A075B604 112 aa11.8□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Gata2O09100 480 aa11.8□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Sc5dO88822 299 aa11.8□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Tmem177Q8BPE4 311 aa11.8□□□□□ -0.52
Col3a1-201ENSMUST00000087883 P2ry6Q9ERK9 328 aa11.8□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Igkv4-86A0A0G2JGE7 114 aa11.8□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Gm10428J3QNV7 132 aa11.8□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Mmp23O88676 391 aa11.8□□□□□ -0.52
Col3a1-201ENSMUST00000087883 MymxQ2Q5T5 84 aa11.8□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Dkk2Q9QYZ8 259 aa11.8□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Sumo3Q9Z172 110 aa11.8□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Gm9920D3YVZ2 140 aa11.79□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Zfp72Q0VFY0 435 aa11.79□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Olfr263Q7TQT8 317 aa11.79□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Dnase2bQ9QY48 354 aa11.79□□□□□ -0.52
Col3a1-201ENSMUST00000087883 6430628N08RikA0A0U1RQ45 177 aa11.79□□□□□ -0.52
Col3a1-201ENSMUST00000087883 E430018J23RikE9PZQ8 461 aa11.79□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Znf329Q6GQR8 522 aa11.79□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Siglec12Q91Y57 467 aa11.79□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Opn3Q9WUK7 400 aa11.79□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Gm13030A2APQ6 143 aa11.79□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Znf474Q6V5K9 347 aa11.79□□□□□ -0.52
Col3a1-201ENSMUST00000087883 GaptQ8CB93 157 aa11.79□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Olfr523Q8VFE7 317 aa11.79□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Prb1Q91X93 504 aa11.79□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Pf4Q9Z126 105 aa11.79□□□□□ -0.52
Col3a1-201ENSMUST00000087883 P01801 115 aa11.79□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Cd5P13379 494 aa11.79□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Fgf5P15656 264 aa11.79□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Elovl5Q8BHI7 299 aa11.79□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Vmn1r235Q8R297 328 aa11.79□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Gtf3aQ8VHT7 364 aa11.79□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Scrt1Q99M85 348 aa11.79□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Zfp119aQ9JIC0 545 aa11.79□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Olfr1369-ps1A0A140T8K7 317 aa11.78□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Gm17727E9Q4V7 109 aa11.78□□□□□ -0.52
Col3a1-201ENSMUST00000087883 1700067P10RikG3X8U2 183 aa11.78□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Nkx2-8O70584 235 aa11.78□□□□□ -0.52
Col3a1-201ENSMUST00000087883 MpzP27573 248 aa11.78□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Zic3Q62521 466 aa11.78□□□□□ -0.52
Col3a1-201ENSMUST00000087883 LbhQ9CX60 105 aa11.78□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Fgf16Q9ESL8 207 aa11.78□□□□□ -0.52
Col3a1-201ENSMUST00000087883 G6pc2Q9Z186 355 aa11.78□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Dock2Q8C3J5 1828 aa11.78□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Gm45785A0A1B0GT05 94 aa11.78□□□□□ -0.52
Col3a1-201ENSMUST00000087883 E030025P04RikA2A6V5 185 aa11.78□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Bet1lO35153 111 aa11.78□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Oosp2Q4FZG8 168 aa11.78□□□□□ -0.52
Col3a1-201ENSMUST00000087883 OpalinQ7M750 143 aa11.78□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Ankrd12G5E893 2041 aa11.78□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Trav6d-5A0A075B6B9 112 aa11.78□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Rnase2aQ8K196 155 aa11.78□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Trav4-2A0A075B638 110 aa11.78□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Gm45717A0A1B0GT68 152 aa11.78□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Dlx6P70397 175 aa11.78□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Pax8Q00288 457 aa11.78□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Q9D727 114 aa11.78□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Hdgfl3Q9JMG7 202 aa11.78□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Ighv5-16A0A0B4J1P4 117 aa11.78□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Gm11444F6QMA6 170 aa11.78□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Snrpd3P62320 126 aaKnown RBP11.78□□□□□ -0.52
Col3a1-201ENSMUST00000087883 VwceQ3U515 929 aa11.78□□□□□ -0.52
Col3a1-201ENSMUST00000087883 AgaQ64191 346 aa11.78□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Hist1h2bfP10853 126 aa11.77□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Hist1h2bbQ64475 126 aa11.77□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Hist1h2bkQ8CGP1 126 aaKnown RBP11.77□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Hist1h2bpQ8CGP2 126 aaKnown RBP11.77□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Anapc10Q8K2H6 185 aa11.77□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Prss29Q99MS4 279 aa11.77□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Gm36368A0A1D5RLK8 91 aa11.77□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Trav12d-1A0N8R0 115 aa11.77□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Obp2bA2BHR0 176 aa11.77□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Defa7P50705 93 aa11.77□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Loxl2P58022 776 aa11.77□□□□□ -0.53
Col3a1-201ENSMUST00000087883 GalnsQ571E4 520 aa11.77□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Gng5Q80SZ7 68 aa11.77□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Znf524Q9D0B1 321 aa11.77□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Dtx1Q61010 627 aa11.77□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Cd200r1lQ6XJV6 249 aa11.77□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Mrpl27Q99N92 148 aa11.77□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Gm35549A0A0N4SUS7 141 aa11.77□□□□□ -0.53
Col3a1-201ENSMUST00000087883 EtdQ80SW5 59 aa11.77□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Olfr1367Q8VFG2 316 aa11.77□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Vgll4Q80V24 287 aa11.76□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Prss33Q80WM7 277 aa11.76□□□□□ -0.53
Col3a1-201ENSMUST00000087883 CfdP03953 259 aa11.76□□□□□ -0.53
Col3a1-201ENSMUST00000087883 C1ql4Q4ZJM9 238 aa11.76□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Rasl11aQ6IMB1 242 aa11.76□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Uqcrfs1Q9CR68 274 aa11.76□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Myo5aQ99104 1853 aaKnown RBP11.76□□□□□ -0.53
Col3a1-201ENSMUST00000087883 HrkP62816 92 aa11.76□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Dctn5Q9QZB9 182 aa11.76□□□□□ -0.53
Col3a1-201ENSMUST00000087883 P01783 136 aa11.76□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Vmn1r70Q8R254 298 aa11.76□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Olfr810Q8VFH9 312 aa11.76□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 57.9 ms