RNA–Protein interactions for RNA: ENSMUST00000065304.11

Rtn3-202, Transcript of Reticulon-3, mousemouse

TSL 1 (best) BASIC

Gene Rtn3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3-202ENSMUST00000065304 Dctn5Q9QZB9 182 aa9.56□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Pik3c2bE9QAN8 1632 aa9.56□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Ahnak2E9PYB0 1738 aaKnown RBP9.56□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Itsn1Q9Z0R4 1714 aa9.56□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Ucp1P12242 307 aa9.56□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Ttc9cQ810A3 171 aa9.56□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Znf787Q8BIF9 381 aa9.56□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Marf1Q8BJ34 1730 aaKnown RBP9.55□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Trav12-1A0N8R1 115 aa9.55□□□□□ -0.88
Rtn3-202ENSMUST00000065304 LipiF6YQT7 476 aa9.55□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Pax8Q00288 457 aa9.55□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Iba57Q8CAK1 358 aaKnown RBP9.55□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Clec5aQ9R007 190 aa9.55□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Slc25a53A2AF28 346 aa9.55□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Mllt11P97783 90 aa9.55□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Gm10767Q3TQP0 103 aa9.55□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Plppr1Q8BFZ2 325 aa9.55□□□□□ -0.88
Rtn3-202ENSMUST00000065304 QrfpQ8CE23 124 aa9.55□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Cysltr1Q99JA4 352 aa9.55□□□□□ -0.88
Rtn3-202ENSMUST00000065304 MNCb-2875Q9DCB3 74 aa9.55□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Ighv1-15A0A0A6YXA5 117 aa9.55□□□□□ -0.88
Rtn3-202ENSMUST00000065304 6330409D20RikA2AK85 162 aa9.55□□□□□ -0.88
Rtn3-202ENSMUST00000065304 P01664 111 aa9.55□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Csf2rb2P26954 878 aa9.55□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Gm10842Q3U587 122 aa9.55□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Gm9945Q8BNZ3 91 aa9.55□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Lipt2Q9D009 231 aa9.55□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Klk4Q9Z0M1 255 aa9.55□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Gm29423A0A087WRM1 55 aa9.55□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Mpv17P19258 176 aa9.55□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Gm21370Q3T9V6 190 aa9.55□□□□□ -0.88
Rtn3-202ENSMUST00000065304 RflnbQ5SVD0 216 aa9.55□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Prss50Q8BLH5 439 aa9.55□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Gm13199Q8C8E0 125 aa9.55□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Marveld3Q9D956 376 aa9.55□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Trbv15A0A0A6YYE3 115 aa9.54□□□□□ -0.88
Rtn3-202ENSMUST00000065304 4930426L09RikE9Q0N7 123 aa9.54□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Trav7d-3Q5R1I1 112 aa9.54□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Gng7Q61016 68 aa9.54□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Rtn4rl2Q7M6Z0 420 aa9.54□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Nrn1lQ8C4W3 162 aa9.54□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Dpm2Q9Z324 84 aa9.54□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Cisd3B1AR13 137 aa9.54□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Frrs1lB1AXV0 293 aa9.54□□□□□ -0.88
Rtn3-202ENSMUST00000065304 9830107B12RikD3Z5D6 160 aa9.54□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Gm10521E9PZK0 135 aa9.54□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Gm17727E9Q4V7 109 aa9.54□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Zfp977L7N2E7 438 aa9.54□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Olfr139Q60891 315 aa9.54□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Glrx5Q80Y14 152 aa9.54□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Mrpl52Q9D0Y8 121 aa9.54□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Tmem170aQ9D342 144 aa9.54□□□□□ -0.88
Rtn3-202ENSMUST00000065304 DynapQ9D7M5 161 aa9.54□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Vmn1r54Q9EPB8 315 aa9.54□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Hs3st3b1Q9QZS6 390 aa9.54□□□□□ -0.88
Rtn3-202ENSMUST00000065304 TprF6ZDS4 2431 aaKnown RBP9.54□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Trav8-1A0A075B641 109 aa9.54□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Klk1b22P15948 259 aa9.54□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Lyl1P27792 278 aa9.54□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Rpl23P62830 140 aaKnown RBP9.54□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Mogat1Q91ZV4 335 aa9.54□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Tmem8bB1AWJ5 472 aa9.54□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Gm4788E9Q8B5 879 aa9.54□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Thy1P01831 162 aa9.54□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Gm17334Q8C6U3 126 aa9.54□□□□□ -0.88
Rtn3-202ENSMUST00000065304 GgactQ923B0 149 aa9.54□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Tmem89Q9DA04 169 aa9.54□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Trav3-4A0A075B654 114 aa9.53□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Tm4sf20Q9CQY8 226 aa9.53□□□□□ -0.88
Rtn3-202ENSMUST00000065304 SNORCQ9CXL7 121 aa9.53□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Hcfc1r1Q9CYQ5 120 aa9.53□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Ubr1O70481 1757 aa9.53□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Sptbn2Q68FG2 2388 aa9.53□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Igkv10-96A0A140T8M1 115 aa9.53□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Socs3O35718 225 aa9.53□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Tcrg-V1P06325 135 aa9.53□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Mrpl27Q99N92 148 aa9.53□□□□□ -0.88
Rtn3-202ENSMUST00000065304 PmvkQ9D1G2 192 aa9.53□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Sigmar1O55242 223 aa9.53□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Q149G0 166 aaKnown RBP9.53□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Sp9Q64HY3 484 aa9.53□□□□□ -0.88
Rtn3-202ENSMUST00000065304 GaptQ8CB93 157 aa9.53□□□□□ -0.88
Rtn3-202ENSMUST00000065304 PpifQ99KR7 206 aaKnown RBP9.53□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Lyzl4Q9D925 145 aa9.53□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Lypd2Q9DD23 127 aa9.53□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Efemp2Q9WVJ9 443 aa9.53□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Igkv4-53A0A0G2JFC6 119 aa9.53□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Inafm2A0A1L1STD6 152 aa9.53□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Igsf23B2RTN2 239 aa9.53□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Lamtor3O88653 124 aa9.53□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Sod1P08228 154 aaKnown RBP9.53□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Igfbp3P47878 292 aa9.53□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Bricd5Q8BV89 174 aa9.53□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Lypd3Q91YK8 363 aa9.53□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Rnase6Q9D244 153 aa9.53□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Ndufa7Q9Z1P6 113 aaKnown RBP9.53□□□□□ -0.88
Rtn3-202ENSMUST00000065304 Ighv5-9A0A075B5Q2 117 aa9.52□□□□□ -0.89
Rtn3-202ENSMUST00000065304 Trav16d-dv11A0A075B617 117 aa9.52□□□□□ -0.89
Rtn3-202ENSMUST00000065304 Gm42543A0A0G2JET4 117 aa9.52□□□□□ -0.89
Rtn3-202ENSMUST00000065304 Trav12d-1A0N8R0 115 aa9.52□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 46 ms