RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Olfr715bE9Q725 315 aa9.82□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Atp5g2P56383 146 aa9.82□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Olfr715Q8VG49 315 aa9.82□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Gm20773A0A0A6YXW2 232 aa9.82□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Gm20807A0A0A6YXX7 232 aa9.82□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Tmem29A2ANF5 204 aa9.82□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Gm20873J3QMQ9 232 aa9.82□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Gm20795J3QP49 232 aa9.82□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Hoxa3P02831 443 aa9.82□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Gm21440Q3TTD8 232 aa9.82□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Ube2d2bQ6ZWY6 147 aa9.82□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Dusp18Q8VE01 188 aa9.82□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Cml3Q9JIY8 226 aa9.82□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Tcrg-V5A0A0G2JGV5 113 aa9.82□□□□□ -0.84
Pcif1-201ENSMUST00000041643 3110021N24RikJ3QMN2 152 aa9.82□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Olfr976Q8VF15 326 aa9.82□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Foxl2O88470 375 aa9.82□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Lynx1P0DP60 116 aa9.82□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Q80X32 188 aaKnown RBP9.82□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Rnase2aQ8K196 155 aa9.82□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Klf11Q8K1S5 502 aa9.82□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Klk10Q99M20 278 aa9.82□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Ighv7-2A0A0A6YX91 119 aa9.81□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Sox15P43267 231 aa9.81□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Dlx6P70397 175 aa9.81□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Ifi27l2bQ8VC49 283 aa9.81□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Gm44596A0A0N4SVA0 210 aa9.81□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Gata2O09100 480 aa9.81□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Cd74P04441 279 aa9.81□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Reg1P43137 165 aa9.81□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Siah2Q06986 325 aa9.81□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Reep5Q60870 185 aa9.81□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Olfr481Q8VGI5 312 aa9.81□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Srp19Q9D7A6 144 aa9.81□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Olfr749E9Q438 313 aa9.81□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Heatr1G3X9B1 2143 aaKnown RBP9.81□□□□□ -0.84
Pcif1-201ENSMUST00000041643 PpoxP51175 477 aa9.81□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Smim19Q80ZU4 107 aa9.81□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Nus1Q99LJ8 297 aa9.81□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Tmprss5Q9ER04 455 aa9.81□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Supt4h1aP63271 117 aa9.81□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Olfr965Q7TRA7 312 aa9.81□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Urm1Q9D2P4 101 aa9.81□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Snrnp200Q6P4T2 2136 aaKnown RBP9.81□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Trbv19A0A0B4J1H4 117 aa9.8□□□□□ -0.84
Pcif1-201ENSMUST00000041643 P01725 110 aa9.8□□□□□ -0.84
Pcif1-201ENSMUST00000041643 P04212 136 aa9.8□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Psg19Q4KL31 475 aa9.8□□□□□ -0.84
Pcif1-201ENSMUST00000041643 BC049730Q810N3 246 aa9.8□□□□□ -0.84
Pcif1-201ENSMUST00000041643 PgpQ8CHP8 321 aa9.8□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Parm1Q923D3 296 aa9.8□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Zfp11P10751 647 aa9.8□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Gm10192Q3V0S1 108 aa9.8□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Olfr1262Q8VGN2 304 aa9.8□□□□□ -0.84
Pcif1-201ENSMUST00000041643 CrebbpP45481 2441 aa9.8□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Ighv1-34A0A075B5V2 117 aa9.8□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Cst10Q9JM84 148 aa9.8□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Jsrp1Q3MI48 332 aa9.8□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Smim6Q3U0I6 56 aa9.8□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Prss44Q402U7 372 aa9.8□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Ifna11Q61716 190 aa9.8□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Olfr1173Q7TR24 312 aa9.8□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Olfr435Q8VFS3 313 aa9.8□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Pear1Q8VIK5 1034 aa9.8□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Ythdf2Q91YT7 579 aaKnown RBP9.8□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Zfp27P10077 819 aa9.8□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Trdv2-2Q5R1A4 116 aa9.8□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Nup214Q80U93 2085 aa9.8□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Megf9Q8BH27 600 aa9.8□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Rbfox2Q8BP71 449 aaKnown RBP9.8□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Cd200r1Q9ES57 326 aa9.8□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Pard6aQ9Z101 346 aa9.8□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Svs5P30933 122 aa9.79□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Tnfrsf13cQ9D8D0 175 aa9.79□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Crim1Q9JLL0 1037 aa9.79□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Scgb1b10A0A087WPW0 93 aa9.79□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Ighv1-31A0A0A6YWK5 117 aa9.79□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Olfr1178Q7TR20 323 aa9.79□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Q9CX63 252 aa9.79□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Trav6-1A0A075B5Z8 112 aa9.79□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Klk1b22P15948 259 aa9.79□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Aqp11Q8BHH1 271 aa9.79□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Igkv12-89A0A0G2JGW8 112 aa9.79□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Mettl23A2AA28 253 aa9.79□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Zfp72Q0VFY0 435 aa9.79□□□□□ -0.84
Pcif1-201ENSMUST00000041643 AtraidQ6PGD0 223 aa9.79□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Slc35d2Q762D5 326 aa9.79□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Ube2tQ9CQ37 204 aa9.79□□□□□ -0.84
Pcif1-201ENSMUST00000041643 ApohQ01339 345 aa9.78□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Ndufv3Q8BK30 104 aaKnown RBP9.78□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Srrm4Q8BKA3 608 aa9.78□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Ighv5-9A0A075B5Q2 117 aa9.78□□□□□ -0.84
Pcif1-201ENSMUST00000041643 TymsP07607 307 aa9.78□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Olfr15P23275 312 aa9.78□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Edn3P48299 214 aa9.78□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Tmem88Q9D0N8 159 aa9.78□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Rnase6Q9D244 153 aa9.78□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Trav6d-3A0A075B6B3 112 aa9.78□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Cd81P35762 236 aa9.78□□□□□ -0.84
Pcif1-201ENSMUST00000041643 Trav6-3Q5R1E6 112 aa9.78□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 38 ms