RNA–Protein interactions for RNA: ENSMUST00000029480.8

Prpf38b-201, Transcript of Pre-mRNA-splicing factor 38B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf38b, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38b-201ENSMUST00000029480 Pom121l2Q5SW25 972 aa11.02□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Olfr148Q60887 310 aa11.02□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Mus81Q91ZJ0 551 aa11.02□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Tmem170aQ9D342 144 aa11.02□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Atoh7Q9Z2E5 149 aa11.02□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Trav18A0A075B656 109 aa11.02□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Ighv5-2A0A0A6YVX8 117 aa11.02□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Gm9920D3YVZ2 140 aa11.02□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 P04940 107 aa11.02□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 P04941 107 aa11.02□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Rtp3Q5QGU6 474 aa11.02□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Wdr83osQ6ZWX0 106 aa11.02□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Vmn1r222Q8R269 308 aa11.02□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Derl1Q99J56 251 aa11.02□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Hdhd3Q9CYW4 251 aa11.02□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 PyyQ9EPS2 98 aa11.02□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Trav6d-3A0A075B6B3 112 aa11.01□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Gm4884E9PVP9 694 aa11.01□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Zfp976E9Q981 636 aa11.01□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Nat8f4G5E8L3 226 aa11.01□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Gm20830J3KML6 227 aa11.01□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Rab33bO35963 229 aa11.01□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Oprk1P33534 380 aa11.01□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Fa2hQ5MPP0 372 aa11.01□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Trav6-3Q5R1E6 112 aa11.01□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Olfr963Q7TRA9 311 aa11.01□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Zc2hc1aQ8BJH1 324 aa11.01□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Rnf125Q9D9R0 233 aa11.01□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Zfhx3Q61329 3726 aa11.01□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Ighv5-12A0A075B5Q4 117 aa11.01□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Trbv12-2A0A0B4J1H1 124 aa11.01□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 GzmfP08883 248 aa11.01□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Olfr1465Q7TQR2 307 aa11.01□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Mlst8Q9DCJ1 326 aa11.01□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Trbv3A0A0A6YYE2 117 aa11.01□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Awat1A2ADU9 328 aa11.01□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Tmem92B7ZWI3 162 aa11.01□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Mef2bO55087 349 aa11.01□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Zfp36l1P23950 338 aa11.01□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Fgf8P37237 268 aa11.01□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Il11P47873 199 aa11.01□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Hnrnpa3Q8BG05 379 aaKnown RBP11.01□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Olfr1370Q8VFG4 316 aa11.01□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Egr4Q9WUF2 478 aa11.01□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Cacna1aP97445 2368 aa11□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 E430018J23RikE9PZQ8 461 aa11□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Gm10073E9Q3T0 114 aa11□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 P04943 107 aa11□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Icam2P35330 277 aa11□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Clec12bQ149M0 275 aa11□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Olfr147Q60886 317 aa11□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Olfr113Q8VEU4 312 aa11□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 A0A1Y7VLU2 103 aa11□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Lbhd2G3UW55 114 aa11□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 TfpiO54819 306 aa11□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Slc25a31Q3V132 320 aa11□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Taar3Q5QD16 343 aa11□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Zfp874aQ8BX23 447 aa11□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Tmem178aQ9CZ16 297 aa11□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Fscn3Q9QXW4 498 aa11□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Pglyrp3A1A547 347 aa10.99□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Olfr1104A2AVB5 310 aa10.99□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Gm10203F6QJ09 66 aa10.99□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Hes1P35428 282 aa10.99□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Zfp936Q3ULA8 456 aa10.99□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Gm813Q3UWK9 176 aa10.99□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Olfr1444Q8VFX2 319 aa10.99□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Map1lc3bQ9CQV6 125 aa10.99□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Hspb9Q9DAM3 168 aa10.99□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Cml1Q9JIZ0 222 aa10.99□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 RelnQ60841 3461 aa10.99□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Vmn1r194J3JS27 296 aa10.99□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Ighv3-6P18531 116 aa10.99□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Znf260Q62513 407 aa10.99□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Znf146Q8BQN6 292 aa10.99□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Rln3Q8CHK2 141 aa10.99□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 CstadQ9D245 104 aa10.99□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Olfr894Q9EQB2 313 aa10.99□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 PerpQ9JK95 193 aa10.99□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Slc25a15Q9WVD5 301 aa10.99□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Gm28171A0A087WQ19 227 aa10.98□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Lrrc3cA0A1B0GRI5 255 aa10.98□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Olfr902E9Q6Z7 309 aa10.98□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Cryba1P02525 198 aa10.98□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Sumo1P63166 101 aaKnown RBP10.98□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Gm5468Q8C3D3 155 aa10.98□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 CrhQ8CIT0 187 aa10.98□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 EpcamQ99JW5 315 aa10.98□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Epdr1Q99M71 224 aa10.98□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 3100002H09RikQ9CXW6 140 aa10.98□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 LfngO09010 378 aa10.98□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 P01803 113 aa10.98□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 C5ar1P30993 351 aa10.98□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Gm9Q3UKW5 162 aa10.98□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 CdiptQ8VDP6 213 aa10.98□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Olfr641Q8VGX6 312 aa10.98□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Gm14214V9GX35 225 aa10.98□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Myo9bQ9QY06 2114 aa10.98□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Med13Q5SWW4 2171 aa10.98□□□□□ -0.65
Prpf38b-201ENSMUST00000029480 Wdr86D3Z757 380 aa10.98□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 146.8 ms