RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Gm8653K9J7G2 307 aa9.06□□□□□ -0.96
Msh3-201ENSMUST00000022220 Vmn1r117L7N2C9 307 aa9.06□□□□□ -0.96
Msh3-201ENSMUST00000022220 Gm26965M0QWH4 86 aa9.06□□□□□ -0.96
Msh3-201ENSMUST00000022220 P18530 117 aa9.06□□□□□ -0.96
Msh3-201ENSMUST00000022220 MgpP19788 104 aa9.06□□□□□ -0.96
Msh3-201ENSMUST00000022220 Arf6P62331 175 aa9.06□□□□□ -0.96
Msh3-201ENSMUST00000022220 KncnQ307W7 124 aa9.06□□□□□ -0.96
Msh3-201ENSMUST00000022220 Psg17Q62056 475 aa9.06□□□□□ -0.96
Msh3-201ENSMUST00000022220 Olfr1246Q7TQZ6 314 aa9.06□□□□□ -0.96
Msh3-201ENSMUST00000022220 Wfdc21Q8BTE6 63 aa9.06□□□□□ -0.96
Msh3-201ENSMUST00000022220 Olfr1242Q8VGM6 306 aa9.06□□□□□ -0.96
Msh3-201ENSMUST00000022220 Mrpl51Q9CPY1 128 aa9.06□□□□□ -0.96
Msh3-201ENSMUST00000022220 Pmaip1Q9JM54 103 aa9.06□□□□□ -0.96
Msh3-201ENSMUST00000022220 Myo15bI7HPW8 3033 aa9.06□□□□□ -0.96
Msh3-201ENSMUST00000022220 Gm765B2RVL9 189 aa9.06□□□□□ -0.96
Msh3-201ENSMUST00000022220 Pax1P09084 446 aa9.06□□□□□ -0.96
Msh3-201ENSMUST00000022220 Cd5P13379 494 aa9.06□□□□□ -0.96
Msh3-201ENSMUST00000022220 Twist1P26687 206 aa9.06□□□□□ -0.96
Msh3-201ENSMUST00000022220 Zfp386Q1WWJ5 626 aa9.06□□□□□ -0.96
Msh3-201ENSMUST00000022220 Gm11232Q5SPI8 295 aa9.06□□□□□ -0.96
Msh3-201ENSMUST00000022220 Hils1Q9QYL0 170 aa9.06□□□□□ -0.96
Msh3-201ENSMUST00000022220 Fbln5Q9WVH9 448 aa9.06□□□□□ -0.96
Msh3-201ENSMUST00000022220 Zfp53Q9Z117 652 aa9.06□□□□□ -0.96
Msh3-201ENSMUST00000022220 Sorl1O88307 2215 aaKnown RBP9.06□□□□□ -0.96
Msh3-201ENSMUST00000022220 Trbv1A0A0B4J1G7 116 aa9.06□□□□□ -0.96
Msh3-201ENSMUST00000022220 Olfr869E9PX82 323 aa9.06□□□□□ -0.96
Msh3-201ENSMUST00000022220 Gm14548E9Q1Z6 680 aa9.06□□□□□ -0.96
Msh3-201ENSMUST00000022220 Vmn1r60G3UY47 300 aa9.06□□□□□ -0.96
Msh3-201ENSMUST00000022220 Rab33bO35963 229 aa9.06□□□□□ -0.96
Msh3-201ENSMUST00000022220 Defa-rs7P50715 91 aa9.06□□□□□ -0.96
Msh3-201ENSMUST00000022220 Sssca1P56873 199 aa9.06□□□□□ -0.96
Msh3-201ENSMUST00000022220 KhkP97328 298 aa9.06□□□□□ -0.96
Msh3-201ENSMUST00000022220 Olfr917Q7TRC3 309 aa9.06□□□□□ -0.96
Msh3-201ENSMUST00000022220 Fam234aQ8C0Z1 555 aa9.06□□□□□ -0.96
Msh3-201ENSMUST00000022220 Stac2Q8R1B0 408 aa9.06□□□□□ -0.96
Msh3-201ENSMUST00000022220 Olfr1323Q8VF35 309 aa9.06□□□□□ -0.96
Msh3-201ENSMUST00000022220 Olfr1370Q8VFG4 316 aa9.06□□□□□ -0.96
Msh3-201ENSMUST00000022220 Rpl11Q9CXW4 178 aaKnown RBP9.06□□□□□ -0.96
Msh3-201ENSMUST00000022220 Col6a3E9PWQ3 3284 aa9.05□□□□□ -0.96
Msh3-201ENSMUST00000022220 TrrapQ80YV3 2565 aaKnown RBP9.05□□□□□ -0.96
Msh3-201ENSMUST00000022220 A0A1Y7VLU2 103 aa9.05□□□□□ -0.96
Msh3-201ENSMUST00000022220 Cpsf4lE9Q2N0 280 aa9.05□□□□□ -0.96
Msh3-201ENSMUST00000022220 Gm9733Q1AN91 178 aa9.05□□□□□ -0.96
Msh3-201ENSMUST00000022220 Arl14eplQ3UKZ7 152 aa9.05□□□□□ -0.96
Msh3-201ENSMUST00000022220 SriQ6P069 198 aa9.05□□□□□ -0.96
Msh3-201ENSMUST00000022220 Ccsmst1Q6RUT7 136 aa9.05□□□□□ -0.96
Msh3-201ENSMUST00000022220 Olfr1259Q8VEZ1 309 aa9.05□□□□□ -0.96
Msh3-201ENSMUST00000022220 Ociad1Q9CRD0 247 aaKnown RBP9.05□□□□□ -0.96
Msh3-201ENSMUST00000022220 Tex36Q9D5N9 219 aa9.05□□□□□ -0.96
Msh3-201ENSMUST00000022220 Ttc32Q9DAC7 148 aa9.05□□□□□ -0.96
Msh3-201ENSMUST00000022220 Vmn1r54Q9EPB8 315 aa9.05□□□□□ -0.96
Msh3-201ENSMUST00000022220 Rnase4Q9JJH1 148 aa9.05□□□□□ -0.96
Msh3-201ENSMUST00000022220 OdamA1E960 273 aa9.05□□□□□ -0.96
Msh3-201ENSMUST00000022220 Pcp4P63054 62 aa9.05□□□□□ -0.96
Msh3-201ENSMUST00000022220 Cisd1Q91WS0 108 aaKnown RBP9.05□□□□□ -0.96
Msh3-201ENSMUST00000022220 Tmem219Q9D123 240 aa9.05□□□□□ -0.96
Msh3-201ENSMUST00000022220 Olfr609E9Q4X7 319 aa9.05□□□□□ -0.96
Msh3-201ENSMUST00000022220 Ccl1P10146 92 aa9.05□□□□□ -0.96
Msh3-201ENSMUST00000022220 Shisa6Q3UH99 525 aa9.05□□□□□ -0.96
Msh3-201ENSMUST00000022220 Gm10384Q3UQ87 92 aa9.05□□□□□ -0.96
Msh3-201ENSMUST00000022220 Tmprss12Q3V0Q7 336 aa9.05□□□□□ -0.96
Msh3-201ENSMUST00000022220 Pmis2Q497Q9 96 aa9.05□□□□□ -0.96
Msh3-201ENSMUST00000022220 Wdr82Q8BFQ4 313 aa9.05□□□□□ -0.96
Msh3-201ENSMUST00000022220 Immp2lQ8BPT6 175 aa9.05□□□□□ -0.96
Msh3-201ENSMUST00000022220 Fam174bQ8K064 153 aa9.05□□□□□ -0.96
Msh3-201ENSMUST00000022220 Vmn1r62Q8R2C0 300 aa9.05□□□□□ -0.96
Msh3-201ENSMUST00000022220 Olfr33Q8VGX7 318 aa9.05□□□□□ -0.96
Msh3-201ENSMUST00000022220 Lrrc37aB1AWG4 3215 aa9.05□□□□□ -0.96
Msh3-201ENSMUST00000022220 Gm20773A0A0A6YXW2 232 aa9.04□□□□□ -0.96
Msh3-201ENSMUST00000022220 Gm20807A0A0A6YXX7 232 aa9.04□□□□□ -0.96
Msh3-201ENSMUST00000022220 AU041133A0A0J9YVH3 498 aa9.04□□□□□ -0.96
Msh3-201ENSMUST00000022220 Gm20873J3QMQ9 232 aa9.04□□□□□ -0.96
Msh3-201ENSMUST00000022220 Gm20795J3QP49 232 aa9.04□□□□□ -0.96
Msh3-201ENSMUST00000022220 Ifna6P07350 189 aa9.04□□□□□ -0.96
Msh3-201ENSMUST00000022220 Zfp36l1P23950 338 aa9.04□□□□□ -0.96
Msh3-201ENSMUST00000022220 Gm21440Q3TTD8 232 aa9.04□□□□□ -0.96
Msh3-201ENSMUST00000022220 Gm5615Q3UW02 101 aa9.04□□□□□ -0.96
Msh3-201ENSMUST00000022220 Rhbdd2Q8VEK2 361 aa9.04□□□□□ -0.96
Msh3-201ENSMUST00000022220 Olfr1350Q8VF34 308 aa9.04□□□□□ -0.96
Msh3-201ENSMUST00000022220 A0A286YDM5 308 aa9.04□□□□□ -0.96
Msh3-201ENSMUST00000022220 Gm12830F6XVH0 157 aa9.04□□□□□ -0.96
Msh3-201ENSMUST00000022220 P01915 264 aa9.04□□□□□ -0.96
Msh3-201ENSMUST00000022220 Col8a2P25318 699 aa9.04□□□□□ -0.96
Msh3-201ENSMUST00000022220 Taar4Q5QD15 347 aa9.04□□□□□ -0.96
Msh3-201ENSMUST00000022220 Morn2Q6UL01 79 aa9.04□□□□□ -0.96
Msh3-201ENSMUST00000022220 Olfr1183Q8VFF8 303 aa9.04□□□□□ -0.96
Msh3-201ENSMUST00000022220 Brca2P97929 3329 aa9.04□□□□□ -0.96
Msh3-201ENSMUST00000022220 Ighv7-3A0A075B5R2 120 aa9.04□□□□□ -0.96
Msh3-201ENSMUST00000022220 Ceacam15A0A0B4J1L0 234 aa9.04□□□□□ -0.96
Msh3-201ENSMUST00000022220 Ighv1-76A0A0G2JFE9 117 aa9.04□□□□□ -0.96
Msh3-201ENSMUST00000022220 Zfp648D3Z0W3 525 aa9.04□□□□□ -0.96
Msh3-201ENSMUST00000022220 A930017K11RikE0CXQ2 571 aa9.04□□□□□ -0.96
Msh3-201ENSMUST00000022220 TymsP07607 307 aa9.04□□□□□ -0.96
Msh3-201ENSMUST00000022220 Olfr25Q7TRD6 313 aa9.04□□□□□ -0.96
Msh3-201ENSMUST00000022220 Olfr874Q7TRE6 310 aa9.04□□□□□ -0.96
Msh3-201ENSMUST00000022220 Q8C3M9 231 aa9.04□□□□□ -0.96
Msh3-201ENSMUST00000022220 Cdpf1Q8R3A2 119 aa9.04□□□□□ -0.96
Msh3-201ENSMUST00000022220 Ms4a6cQ99N08 217 aa9.04□□□□□ -0.96
Msh3-201ENSMUST00000022220 Rer1Q9CQU3 196 aaKnown RBP9.04□□□□□ -0.96
Msh3-201ENSMUST00000022220 Fam162bQ9CX19 157 aa9.04□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 37.9 ms