RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-231ENST00000622045 UBE2D1P51668 147 aa10.98□□□□□ -0.65
SYNRG-231ENST00000622045 Q6ZS46 218 aa10.98□□□□□ -0.65
SYNRG-231ENST00000622045 NDUFA11Q86Y39 141 aa10.98□□□□□ -0.65
SYNRG-231ENST00000622045 NEXN-AS1Q8NBZ9 246 aa10.98□□□□□ -0.65
SYNRG-231ENST00000622045 CCL21O00585 134 aa10.98□□□□□ -0.65
SYNRG-231ENST00000622045 ATP6V0E1O15342 81 aa10.98□□□□□ -0.65
SYNRG-231ENST00000622045 C9JAW5 83 aa10.97□□□□□ -0.65
SYNRG-231ENST00000622045 IGF1P05019 195 aa10.97□□□□□ -0.65
SYNRG-231ENST00000622045 CRIP2P52943 208 aaPredicted RBP10.97□□□□□ -0.65
SYNRG-231ENST00000622045 C1orf122Q6ZSJ8 110 aa10.97□□□□□ -0.65
SYNRG-231ENST00000622045 TRPT1Q86TN4 253 aaKnown RBP10.97□□□□□ -0.65
SYNRG-231ENST00000622045 ATRXP46100 2492 aa10.97□□□□□ -0.65
SYNRG-231ENST00000622045 TRAV12-1A0A0B4J245 112 aa10.97□□□□□ -0.65
SYNRG-231ENST00000622045 UBE2D3P61077 147 aa10.97□□□□□ -0.65
SYNRG-231ENST00000622045 UBE2D2P62837 147 aa10.97□□□□□ -0.65
SYNRG-231ENST00000622045 RPL11P62913 178 aaKnown RBP10.97□□□□□ -0.65
SYNRG-231ENST00000622045 Q8N9W7 124 aa10.97□□□□□ -0.65
SYNRG-231ENST00000622045 RBAKDNA6NC62 111 aa10.96□□□□□ -0.65
SYNRG-231ENST00000622045 CD7P09564 240 aa10.96□□□□□ -0.65
SYNRG-231ENST00000622045 SUMO2P61956 95 aaKnown RBP10.96□□□□□ -0.65
SYNRG-231ENST00000622045 AJUBAQ96IF1 538 aa10.96□□□□□ -0.65
SYNRG-231ENST00000622045 FAM110DQ8TAY7 271 aaPredicted RBP10.96□□□□□ -0.66
SYNRG-231ENST00000622045 ORMDL2Q53FV1 153 aa10.95□□□□□ -0.66
SYNRG-231ENST00000622045 EEF1AKMT3Q96AZ1 226 aa10.95□□□□□ -0.66
SYNRG-231ENST00000622045 ZFAND3Q9H8U3 227 aa10.95□□□□□ -0.66
SYNRG-231ENST00000622045 BEX4Q9NWD9 120 aaPredicted RBP10.95□□□□□ -0.66
SYNRG-231ENST00000622045 MSRB2Q9Y3D2 182 aa10.95□□□□□ -0.66
SYNRG-231ENST00000622045 IGKV3-7A0A075B6H7 116 aa10.95□□□□□ -0.66
SYNRG-231ENST00000622045 C11orf86A6NJI1 115 aa10.95□□□□□ -0.66
SYNRG-231ENST00000622045 OOSP1A8MZH6 123 aa10.95□□□□□ -0.66
SYNRG-231ENST00000622045 DUSP14O95147 198 aaKnown RBP10.95□□□□□ -0.66
SYNRG-231ENST00000622045 DEFB1P60022 68 aa10.95□□□□□ -0.66
SYNRG-231ENST00000622045 MINOS1Q5TGZ0 78 aa10.95□□□□□ -0.66
SYNRG-231ENST00000622045 TOMM6Q96B49 74 aa10.95□□□□□ -0.66
SYNRG-231ENST00000622045 MINOS1-NBL1R4GNA1 71 aa10.95□□□□□ -0.66
SYNRG-231ENST00000622045 CFC1BP0CG36 223 aa10.95□□□□□ -0.66
SYNRG-231ENST00000622045 CFC1P0CG37 223 aa10.95□□□□□ -0.66
SYNRG-231ENST00000622045 LYRM7Q5U5X0 104 aa10.95□□□□□ -0.66
SYNRG-231ENST00000622045 LINC00527Q9UJ94 153 aa10.95□□□□□ -0.66
SYNRG-231ENST00000622045 PHLDA3Q9Y5J5 127 aa10.95□□□□□ -0.66
SYNRG-231ENST00000622045 SVEP1Q4LDE5 3571 aa10.94□□□□□ -0.66
SYNRG-231ENST00000622045 TRAV4A0A0B4J268 109 aa10.94□□□□□ -0.66
SYNRG-231ENST00000622045 CCDC179H3BU77 68 aa10.94□□□□□ -0.66
SYNRG-231ENST00000622045 CRLF1O75462 422 aa10.94□□□□□ -0.66
SYNRG-231ENST00000622045 TMEM170BQ5T4T1 132 aa10.94□□□□□ -0.66
SYNRG-231ENST00000622045 LINC01619G3V211 115 aa10.94□□□□□ -0.66
SYNRG-231ENST00000622045 GAGE2BQ13066 116 aa10.94□□□□□ -0.66
SYNRG-231ENST00000622045 GAGE2EQ4V326 116 aa10.94□□□□□ -0.66
SYNRG-231ENST00000622045 Q8N6K4 173 aa10.94□□□□□ -0.66
SYNRG-231ENST00000622045 GAGE2DQ9UEU5 116 aa10.94□□□□□ -0.66
SYNRG-231ENST00000622045 NHLRC4P0CG21 123 aaPredicted RBP10.94□□□□□ -0.66
SYNRG-231ENST00000622045 ZFP36P26651 326 aaKnown RBP10.94□□□□□ -0.66
SYNRG-231ENST00000622045 RELNP78509 3460 aa10.94□□□□□ -0.66
SYNRG-231ENST00000622045 SLC25A20O43772 301 aa10.93□□□□□ -0.66
SYNRG-231ENST00000622045 PRR9Q5T870 116 aa10.93□□□□□ -0.66
SYNRG-231ENST00000622045 DCHS2Q6V1P9 2916 aa10.93□□□□□ -0.66
SYNRG-231ENST00000622045 A0A0J9YY99 117 aa10.93□□□□□ -0.66
SYNRG-231ENST00000622045 SNCGO76070 127 aa10.93□□□□□ -0.66
SYNRG-231ENST00000622045 SMIM20Q8N5G0 67 aa10.93□□□□□ -0.66
SYNRG-231ENST00000622045 IGHV3-64A0A075B6Q5 118 aa10.92□□□□□ -0.66
SYNRG-231ENST00000622045 CCDC140Q96MF4 163 aa10.92□□□□□ -0.66
SYNRG-231ENST00000622045 MUC6Q6W4X9 2439 aa10.92□□□□□ -0.66
SYNRG-231ENST00000622045 CLPSL1A2RUU4 121 aa10.92□□□□□ -0.66
SYNRG-231ENST00000622045 COX6B1P14854 86 aa10.92□□□□□ -0.66
SYNRG-231ENST00000622045 TSPEAR-AS2P59090 65 aa10.92□□□□□ -0.66
SYNRG-231ENST00000622045 Q1RN00 199 aa10.92□□□□□ -0.66
SYNRG-231ENST00000622045 TTC32Q5I0X7 151 aa10.92□□□□□ -0.66
SYNRG-231ENST00000622045 IGHV4-39P01824 125 aa10.92□□□□□ -0.66
SYNRG-231ENST00000622045 FOXC1Q12948 553 aa10.92□□□□□ -0.66
SYNRG-231ENST00000622045 NTN5Q8WTR8 489 aaPredicted RBP10.92□□□□□ -0.66
SYNRG-231ENST00000622045 EBI3Q14213 229 aa10.91□□□□□ -0.66
SYNRG-231ENST00000622045 SHISA2Q6UWI4 295 aa10.91□□□□□ -0.66
SYNRG-231ENST00000622045 C10orf126Q8N4M7 172 aa10.91□□□□□ -0.66
SYNRG-231ENST00000622045 OR10J6PQ8NGY7 276 aa10.91□□□□□ -0.66
SYNRG-231ENST00000622045 ASH1LQ9NR48 2969 aaKnown RBP10.91□□□□□ -0.66
SYNRG-231ENST00000622045 SAA4P35542 130 aa10.91□□□□□ -0.66
SYNRG-231ENST00000622045 RPL39P62891 51 aaKnown RBP10.91□□□□□ -0.66
SYNRG-231ENST00000622045 HERV-K104P63124 156 aa10.91□□□□□ -0.66
SYNRG-231ENST00000622045 C3orf56Q8N813 242 aa10.91□□□□□ -0.66
SYNRG-231ENST00000622045 PRO1854Q9UHT4 67 aa10.91□□□□□ -0.66
SYNRG-231ENST00000622045 TMEM262E9PQX1 116 aa10.9□□□□□ -0.66
SYNRG-231ENST00000622045 C9orf47Q6ZRZ4 202 aa10.9□□□□□ -0.66
SYNRG-231ENST00000622045 TMEM219Q86XT9 240 aa10.9□□□□□ -0.66
SYNRG-231ENST00000622045 NDUFV3P56181 108 aaKnown RBP10.9□□□□□ -0.66
SYNRG-231ENST00000622045 TP53TG1Q9Y2A0 90 aa10.9□□□□□ -0.66
SYNRG-231ENST00000622045 ASIPP42127 132 aa10.89□□□□□ -0.67
SYNRG-231ENST00000622045 HERVK_113P61574 105 aa10.89□□□□□ -0.67
SYNRG-231ENST00000622045 CITED1Q99966 193 aa10.89□□□□□ -0.67
SYNRG-231ENST00000622045 IGF2RP11717 2491 aa10.89□□□□□ -0.67
SYNRG-231ENST00000622045 TRBV7-1A0A0A6YYK4 115 aa10.89□□□□□ -0.67
SYNRG-231ENST00000622045 TRAV2A0A0B4J234 112 aa10.89□□□□□ -0.67
SYNRG-231ENST00000622045 CRYGDP07320 174 aa10.89□□□□□ -0.67
SYNRG-231ENST00000622045 RNASE4P34096 147 aaKnown RBP10.89□□□□□ -0.67
SYNRG-231ENST00000622045 A4D1N5 150 aa10.89□□□□□ -0.67
SYNRG-231ENST00000622045 IGHV3-30P01768 117 aa10.89□□□□□ -0.67
SYNRG-231ENST00000622045 IGHV3-30-5P0DP03 117 aa10.89□□□□□ -0.67
SYNRG-231ENST00000622045 CDSNQ15517 529 aa10.89□□□□□ -0.67
SYNRG-231ENST00000622045 DPH3P1Q9H4G8 78 aa10.89□□□□□ -0.67
SYNRG-231ENST00000622045 IGHV3OR16-10A0A075B7F0 116 aa10.88□□□□□ -0.67
SYNRG-231ENST00000622045 TRAV21A0A0B4J279 112 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms