RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 ASIPP42127 132 aa5.8□□□□□ -1.48
CPNE3-209ENST00000620393 FAM3BP58499 235 aaPredicted RBP5.8□□□□□ -1.48
CPNE3-209ENST00000620393 RRN3P1Q2M238 152 aa5.8□□□□□ -1.48
CPNE3-209ENST00000620393 WDR73Q6P4I2 378 aa5.8□□□□□ -1.48
CPNE3-209ENST00000620393 ZNF493Q6ZR52 646 aa5.8□□□□□ -1.48
CPNE3-209ENST00000620393 FER1L6-AS1Q8NA97 138 aa5.8□□□□□ -1.48
CPNE3-209ENST00000620393 NUP35Q8NFH5 326 aa5.8□□□□□ -1.48
CPNE3-209ENST00000620393 SCRT2Q9NQ03 307 aa5.8□□□□□ -1.48
CPNE3-209ENST00000620393 MDFICQ9P1T7 246 aa5.8□□□□□ -1.48
CPNE3-209ENST00000620393 NAT8BQ9UHF3 227 aa5.8□□□□□ -1.48
CPNE3-209ENST00000620393 TP53TG1Q9Y2A0 90 aa5.8□□□□□ -1.48
CPNE3-209ENST00000620393 NOTCH1P46531 2555 aa5.79□□□□□ -1.48
CPNE3-209ENST00000620393 HIGD1CA8MV81 97 aa5.79□□□□□ -1.48
CPNE3-209ENST00000620393 SNAI2O43623 268 aa5.79□□□□□ -1.48
CPNE3-209ENST00000620393 SCO1O75880 301 aa5.79□□□□□ -1.48
CPNE3-209ENST00000620393 OR5AL1P0C617 328 aa5.79□□□□□ -1.48
CPNE3-209ENST00000620393 S100PP25815 95 aa5.79□□□□□ -1.48
CPNE3-209ENST00000620393 TCL1AP56279 114 aa5.79□□□□□ -1.48
CPNE3-209ENST00000620393 DEFB135Q30KP9 77 aa5.79□□□□□ -1.48
CPNE3-209ENST00000620393 TMEM88Q6PEY1 159 aa5.79□□□□□ -1.48
CPNE3-209ENST00000620393 KCNIP4Q6PIL6 250 aa5.79□□□□□ -1.48
CPNE3-209ENST00000620393 LYZL1Q6UWQ5 148 aa5.79□□□□□ -1.48
CPNE3-209ENST00000620393 SBSPONQ8IVN8 264 aa5.79□□□□□ -1.48
CPNE3-209ENST00000620393 OR11H2Q8NH07 326 aa5.79□□□□□ -1.48
CPNE3-209ENST00000620393 PGLYRP4Q96LB8 373 aa5.79□□□□□ -1.48
CPNE3-209ENST00000620393 C9orf85Q96MD7 179 aa5.79□□□□□ -1.48
CPNE3-209ENST00000620393 OVOL2Q9BRP0 275 aa5.79□□□□□ -1.48
CPNE3-209ENST00000620393 X6R8D5 127 aa5.79□□□□□ -1.48
CPNE3-209ENST00000620393 IGHV4-4A0A075B6R2 117 aa5.78□□□□□ -1.48
CPNE3-209ENST00000620393 TRAV9-1A0A075B6T8 112 aa5.78□□□□□ -1.48
CPNE3-209ENST00000620393 H3BVH4 76 aa5.78□□□□□ -1.48
CPNE3-209ENST00000620393 CTRLP40313 264 aa5.78□□□□□ -1.48
CPNE3-209ENST00000620393 ELOBQ15370 118 aa5.78□□□□□ -1.48
CPNE3-209ENST00000620393 CBLN2Q8IUK8 224 aa5.78□□□□□ -1.48
CPNE3-209ENST00000620393 C11orf72Q8NBR9 251 aa5.78□□□□□ -1.48
CPNE3-209ENST00000620393 MRAPQ8TCY5 172 aa5.78□□□□□ -1.48
CPNE3-209ENST00000620393 RNASE8Q8TDE3 154 aaKnown RBP5.78□□□□□ -1.48
CPNE3-209ENST00000620393 TMEM263Q8WUH6 116 aaKnown RBP5.78□□□□□ -1.48
CPNE3-209ENST00000620393 PTH2Q96A98 100 aa5.78□□□□□ -1.48
CPNE3-209ENST00000620393 BTF3L4Q96K17 158 aa5.78□□□□□ -1.48
CPNE3-209ENST00000620393 YPEL4Q96NS1 127 aa5.78□□□□□ -1.48
CPNE3-209ENST00000620393 SPXQ9BT56 116 aa5.78□□□□□ -1.48
CPNE3-209ENST00000620393 TPPP3Q9BW30 176 aa5.78□□□□□ -1.48
CPNE3-209ENST00000620393 CNFNQ9BYD5 112 aa5.78□□□□□ -1.48
CPNE3-209ENST00000620393 GSN-AS1Q9NRJ2 163 aa5.78□□□□□ -1.48
CPNE3-209ENST00000620393 PHLDA3Q9Y5J5 127 aa5.78□□□□□ -1.48
CPNE3-209ENST00000620393 TIMM8BQ9Y5J9 83 aaPredicted RBP5.78□□□□□ -1.48
CPNE3-209ENST00000620393 URGCP-MRPS24S4R325 110 aa5.78□□□□□ -1.48
CPNE3-209ENST00000620393 NBEAL1Q6ZS30 2694 aa5.77□□□□□ -1.49
CPNE3-209ENST00000620393 TRBV24-1A0A075B6N3 115 aa5.77□□□□□ -1.49
CPNE3-209ENST00000620393 MUC21A0A0G2JKD1 596 aa5.77□□□□□ -1.49
CPNE3-209ENST00000620393 MUC21A0A140T8X8 626 aa5.77□□□□□ -1.49
CPNE3-209ENST00000620393 A0A1B0GUT8 65 aa5.77□□□□□ -1.49
CPNE3-209ENST00000620393 MIFP14174 115 aa5.77□□□□□ -1.49
CPNE3-209ENST00000620393 CACNG7P62955 275 aa5.77□□□□□ -1.49
CPNE3-209ENST00000620393 ZNF415Q09FC8 603 aa5.77□□□□□ -1.49
CPNE3-209ENST00000620393 DAZ2Q13117 558 aaKnown RBP5.77□□□□□ -1.49
CPNE3-209ENST00000620393 RIGQ13278 110 aa5.77□□□□□ -1.49
CPNE3-209ENST00000620393 BORCS7Q96B45 105 aa5.77□□□□□ -1.49
CPNE3-209ENST00000620393 C16orf74Q96GX8 76 aa5.77□□□□□ -1.49
CPNE3-209ENST00000620393 TM2D3Q9BRN9 247 aa5.77□□□□□ -1.49
CPNE3-209ENST00000620393 PLAC8L1A1L4L8 177 aa5.76□□□□□ -1.49
CPNE3-209ENST00000620393 COLCA2A8K830 154 aa5.76□□□□□ -1.49
CPNE3-209ENST00000620393 SNURFLB1AK76 121 aa5.76□□□□□ -1.49
CPNE3-209ENST00000620393 M0R2P5 195 aa5.76□□□□□ -1.49
CPNE3-209ENST00000620393 SPINK4O60575 86 aa5.76□□□□□ -1.49
CPNE3-209ENST00000620393 NTF3P20783 257 aa5.76□□□□□ -1.49
CPNE3-209ENST00000620393 SSTP61278 116 aa5.76□□□□□ -1.49
CPNE3-209ENST00000620393 DEFA6Q01524 100 aa5.76□□□□□ -1.49
CPNE3-209ENST00000620393 TWIST1Q15672 202 aa5.76□□□□□ -1.49
CPNE3-209ENST00000620393 PIK3CD-AS1Q5SR53 167 aa5.76□□□□□ -1.49
CPNE3-209ENST00000620393 SPANXN1Q5VSR9 72 aa5.76□□□□□ -1.49
CPNE3-209ENST00000620393 ATP5L2Q7Z4Y8 100 aa5.76□□□□□ -1.49
CPNE3-209ENST00000620393 OR10AG1Q8NH19 301 aa5.76□□□□□ -1.49
CPNE3-209ENST00000620393 SPATA25Q9BR10 227 aa5.76□□□□□ -1.49
CPNE3-209ENST00000620393 TGIF2-C20orf24A0A0A6YYL0 155 aa5.75□□□□□ -1.49
CPNE3-209ENST00000620393 IGHV4-28A0A0C4DH34 117 aa5.75□□□□□ -1.49
CPNE3-209ENST00000620393 A0A1B0GW15 77 aa5.75□□□□□ -1.49
CPNE3-209ENST00000620393 A0A1B0GXF2 115 aa5.75□□□□□ -1.49
CPNE3-209ENST00000620393 PAX4O43316 350 aa5.75□□□□□ -1.49
CPNE3-209ENST00000620393 NXPH4O95158 308 aa5.75□□□□□ -1.49
CPNE3-209ENST00000620393 LGALS9BQ3B8N2 356 aa5.75□□□□□ -1.49
CPNE3-209ENST00000620393 ZNF876PQ49A33 203 aa5.75□□□□□ -1.49
CPNE3-209ENST00000620393 MRPL54Q6P161 138 aaKnown RBP5.75□□□□□ -1.49
CPNE3-209ENST00000620393 RASL11AQ6T310 242 aa5.75□□□□□ -1.49
CPNE3-209ENST00000620393 ZFP82Q8N141 532 aa5.75□□□□□ -1.49
CPNE3-209ENST00000620393 Q8NAQ8 132 aa5.75□□□□□ -1.49
CPNE3-209ENST00000620393 SYT8Q8NBV8 401 aa5.75□□□□□ -1.49
CPNE3-209ENST00000620393 IL17DQ8TAD2 202 aa5.75□□□□□ -1.49
CPNE3-209ENST00000620393 RASL10AQ92737 203 aa5.75□□□□□ -1.49
CPNE3-209ENST00000620393 FAM210BQ96KR6 192 aa5.75□□□□□ -1.49
CPNE3-209ENST00000620393 B9D2Q9BPU9 175 aa5.75□□□□□ -1.49
CPNE3-209ENST00000620393 RETNQ9HD89 108 aa5.75□□□□□ -1.49
CPNE3-209ENST00000620393 NOP10Q9NPE3 64 aaKnown RBP5.75□□□□□ -1.49
CPNE3-209ENST00000620393 MSRB1Q9NZV6 116 aa5.75□□□□□ -1.49
CPNE3-209ENST00000620393 M0R381 172 aa5.74□□□□□ -1.49
CPNE3-209ENST00000620393 S100A8P05109 93 aa5.74□□□□□ -1.49
CPNE3-209ENST00000620393 CAMPP49913 170 aa5.74□□□□□ -1.49
CPNE3-209ENST00000620393 EMP1P54849 157 aa5.74□□□□□ -1.49
CPNE3-209ENST00000620393 HBBP68871 147 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms