RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 LECT2O14960 151 aa2.85□□□□□ -1.95
SNCA-213ENST00000618500 FAUP35544 74 aaKnown RBP2.85□□□□□ -1.95
SNCA-213ENST00000618500 TMEM183BQ1AE95 376 aa2.85□□□□□ -1.95
SNCA-213ENST00000618500 LINC01620Q4KN68 170 aa2.85□□□□□ -1.95
SNCA-213ENST00000618500 ENHOQ6UWT2 76 aa2.85□□□□□ -1.95
SNCA-213ENST00000618500 TMEM183AQ8IXX5 376 aa2.85□□□□□ -1.95
SNCA-213ENST00000618500 ASB13Q8WXK3 278 aa2.85□□□□□ -1.95
SNCA-213ENST00000618500 URGCP-MRPS24S4R325 110 aa2.85□□□□□ -1.95
SNCA-213ENST00000618500 IGKV2-40A0A087WW87 121 aaPredicted RBP2.85□□□□□ -1.95
SNCA-213ENST00000618500 SMCO3A2RU48 225 aa2.85□□□□□ -1.95
SNCA-213ENST00000618500 PGPA6NDG6 321 aa2.85□□□□□ -1.95
SNCA-213ENST00000618500 FAM25AB3EWG3 89 aa2.85□□□□□ -1.95
SNCA-213ENST00000618500 FAM25CB3EWG5 89 aa2.85□□□□□ -1.95
SNCA-213ENST00000618500 FAM25GB3EWG6 89 aa2.85□□□□□ -1.95
SNCA-213ENST00000618500 IGKV2D-40P01614 121 aaPredicted RBP2.85□□□□□ -1.95
SNCA-213ENST00000618500 KCNIP4Q6PIL6 250 aa2.85□□□□□ -1.95
SNCA-213ENST00000618500 FXYD5Q96DB9 178 aa2.85□□□□□ -1.95
SNCA-213ENST00000618500 MRPS26Q9BYN8 205 aaKnown RBP2.85□□□□□ -1.95
SNCA-213ENST00000618500 LINC00474Q9P2X8 69 aa2.85□□□□□ -1.95
SNCA-213ENST00000618500 CRCT1Q9UGL9 99 aa2.85□□□□□ -1.95
SNCA-213ENST00000618500 M0R3E3 92 aa2.85□□□□□ -1.95
SNCA-213ENST00000618500 PHOX2AO14813 284 aa2.85□□□□□ -1.95
SNCA-213ENST00000618500 CSN1S1P47710 185 aa2.85□□□□□ -1.95
SNCA-213ENST00000618500 CAMLGP49069 296 aa2.85□□□□□ -1.95
SNCA-213ENST00000618500 IGLV1-50A0A075B6I6 118 aa2.84□□□□□ -1.95
SNCA-213ENST00000618500 TRAV8-4A0A0B4J246 113 aa2.84□□□□□ -1.95
SNCA-213ENST00000618500 P01737 135 aa2.84□□□□□ -1.95
SNCA-213ENST00000618500 TCRBP04435 133 aa2.84□□□□□ -1.95
SNCA-213ENST00000618500 AP3S2P59780 193 aa2.84□□□□□ -1.95
SNCA-213ENST00000618500 NHLH2Q02577 135 aa2.84□□□□□ -1.95
SNCA-213ENST00000618500 MZT2BQ6NZ67 158 aa2.84□□□□□ -1.95
SNCA-213ENST00000618500 BCL7BQ9BQE9 202 aa2.84□□□□□ -1.95
SNCA-213ENST00000618500 A0A087WYN8 130 aa2.84□□□□□ -1.96
SNCA-213ENST00000618500 F5H697 171 aa2.84□□□□□ -1.96
SNCA-213ENST00000618500 TGFBR1P36897 503 aa2.84□□□□□ -1.96
SNCA-213ENST00000618500 UBE2D3P61077 147 aa2.84□□□□□ -1.96
SNCA-213ENST00000618500 UBE2D2P62837 147 aa2.84□□□□□ -1.96
SNCA-213ENST00000618500 MAJINQ3KP22 176 aa2.84□□□□□ -1.96
SNCA-213ENST00000618500 ZNF506Q5JVG8 444 aa2.84□□□□□ -1.96
SNCA-213ENST00000618500 NRARPQ7Z6K4 114 aa2.84□□□□□ -1.96
SNCA-213ENST00000618500 OR5C1Q8NGR4 320 aa2.84□□□□□ -1.96
SNCA-213ENST00000618500 VCX3AQ9NNX9 186 aa2.84□□□□□ -1.96
SNCA-213ENST00000618500 OTORQ9NRC9 128 aa2.84□□□□□ -1.96
SNCA-213ENST00000618500 A0A087WXM4 84 aa2.83□□□□□ -1.96
SNCA-213ENST00000618500 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.83□□□□□ -1.96
SNCA-213ENST00000618500 CCNKO75909 580 aa2.83□□□□□ -1.96
SNCA-213ENST00000618500 ARL16Q0P5N6 197 aa2.83□□□□□ -1.96
SNCA-213ENST00000618500 Q6ZRP5 223 aa2.83□□□□□ -1.96
SNCA-213ENST00000618500 RBM38Q9H0Z9 239 aaKnown RBP2.83□□□□□ -1.96
SNCA-213ENST00000618500 UQCC1Q9NVA1 299 aa2.83□□□□□ -1.96
SNCA-213ENST00000618500 CARHSP1Q9Y2V2 147 aaKnown RBP2.83□□□□□ -1.96
SNCA-213ENST00000618500 SSSCA1O60232 199 aa2.83□□□□□ -1.96
SNCA-213ENST00000618500 CRPP02741 224 aa2.83□□□□□ -1.96
SNCA-213ENST00000618500 NBEAP1P0C6P0 100 aa2.83□□□□□ -1.96
SNCA-213ENST00000618500 S100A11P31949 105 aa2.83□□□□□ -1.96
SNCA-213ENST00000618500 IL18Q14116 193 aa2.83□□□□□ -1.96
SNCA-213ENST00000618500 ZNF876PQ49A33 203 aa2.83□□□□□ -1.96
SNCA-213ENST00000618500 Q6ZQT7 251 aa2.83□□□□□ -1.96
SNCA-213ENST00000618500 COX8CQ7Z4L0 72 aa2.83□□□□□ -1.96
SNCA-213ENST00000618500 EXOC3-AS1Q8N2X6 119 aa2.83□□□□□ -1.96
SNCA-213ENST00000618500 MITD1Q8WV92 249 aa2.83□□□□□ -1.96
SNCA-213ENST00000618500 SLIRPQ9GZT3 109 aaKnown RBP2.83□□□□□ -1.96
SNCA-213ENST00000618500 KLK12Q9UKR0 248 aa2.83□□□□□ -1.96
SNCA-213ENST00000618500 PAIP2BQ9ULR5 123 aaKnown RBP2.83□□□□□ -1.96
SNCA-213ENST00000618500 LPAP08519 4548 aa2.83□□□□□ -1.96
SNCA-213ENST00000618500 FAM231BA6NCW3 169 aa2.82□□□□□ -1.96
SNCA-213ENST00000618500 C5orf51A6NDU8 294 aa2.82□□□□□ -1.96
SNCA-213ENST00000618500 PGPEP1LA6NFU8 196 aa2.82□□□□□ -1.96
SNCA-213ENST00000618500 KRTAP9-7A8MTY7 169 aa2.82□□□□□ -1.96
SNCA-213ENST00000618500 METTL15P1P0C7V9 234 aa2.82□□□□□ -1.96
SNCA-213ENST00000618500 PPP1R1AQ13522 171 aa2.82□□□□□ -1.96
SNCA-213ENST00000618500 NEDD8Q15843 81 aa2.82□□□□□ -1.96
SNCA-213ENST00000618500 FAAP20Q6NZ36 180 aa2.82□□□□□ -1.96
SNCA-213ENST00000618500 SUN5Q8TC36 379 aa2.82□□□□□ -1.96
SNCA-213ENST00000618500 C9orf170A2RU37 121 aa2.82□□□□□ -1.96
SNCA-213ENST00000618500 NDUFS6O75380 124 aaKnown RBP2.82□□□□□ -1.96
SNCA-213ENST00000618500 RNASE3P12724 160 aaKnown RBP2.82□□□□□ -1.96
SNCA-213ENST00000618500 RRAS2P62070 204 aaPredicted RBP2.82□□□□□ -1.96
SNCA-213ENST00000618500 KHDC3LQ587J8 217 aa2.82□□□□□ -1.96
SNCA-213ENST00000618500 MUC21Q5SSG8 566 aa2.82□□□□□ -1.96
SNCA-213ENST00000618500 MIC13Q5XKP0 118 aa2.82□□□□□ -1.96
SNCA-213ENST00000618500 PRR27Q6MZM9 219 aa2.82□□□□□ -1.96
SNCA-213ENST00000618500 UBE2WQ96B02 151 aa2.82□□□□□ -1.96
SNCA-213ENST00000618500 SFRP2Q96HF1 295 aa2.82□□□□□ -1.96
SNCA-213ENST00000618500 FUNDC2Q9BWH2 189 aa2.82□□□□□ -1.96
SNCA-213ENST00000618500 GPN1Q9HCN4 374 aaPredicted RBP2.82□□□□□ -1.96
SNCA-213ENST00000618500 A0A087WX48 190 aa2.82□□□□□ -1.96
SNCA-213ENST00000618500 TRBV6-8A0A0A6YYG3 113 aa2.82□□□□□ -1.96
SNCA-213ENST00000618500 H3BP45 60 aa2.82□□□□□ -1.96
SNCA-213ENST00000618500 H3BTX0 84 aa2.82□□□□□ -1.96
SNCA-213ENST00000618500 GNRH2O43555 120 aa2.82□□□□□ -1.96
SNCA-213ENST00000618500 NCS1P62166 190 aa2.82□□□□□ -1.96
SNCA-213ENST00000618500 CTF1Q16619 201 aa2.82□□□□□ -1.96
SNCA-213ENST00000618500 RAB2BQ8WUD1 216 aa2.82□□□□□ -1.96
SNCA-213ENST00000618500 IL36BQ9NZH7 164 aa2.82□□□□□ -1.96
SNCA-213ENST00000618500 TRAV34A0A0B4J273 112 aa2.81□□□□□ -1.96
SNCA-213ENST00000618500 GAGE12JA6NER3 117 aa2.81□□□□□ -1.96
SNCA-213ENST00000618500 NAP1L6A6NFF2 107 aa2.81□□□□□ -1.96
SNCA-213ENST00000618500 CXCL1P09341 107 aa2.81□□□□□ -1.96
SNCA-213ENST00000618500 PYYP10082 97 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms