RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 ZNF706Q9Y5V0 76 aaPredicted RBP4.07□□□□□ -1.76
CAPN3-211ENST00000562199 SLC25A15Q9Y619 301 aa4.07□□□□□ -1.76
CAPN3-211ENST00000562199 PDE4DIPQ5VU43 2346 aa4.07□□□□□ -1.76
CAPN3-211ENST00000562199 TDRD6O60522 2096 aaKnown RBP4.06□□□□□ -1.76
CAPN3-211ENST00000562199 NCOA6Q14686 2063 aaPredicted RBP4.06□□□□□ -1.76
CAPN3-211ENST00000562199 PCDH15Q96QU1 1955 aa4.06□□□□□ -1.76
CAPN3-211ENST00000562199 IGHV3OR16-13A0A075B7E8 117 aa4.06□□□□□ -1.76
CAPN3-211ENST00000562199 GFRALQ6UXV0 394 aa4.06□□□□□ -1.76
CAPN3-211ENST00000562199 LINC00173Q6ZV60 143 aa4.06□□□□□ -1.76
CAPN3-211ENST00000562199 Q8IYB0 196 aa4.06□□□□□ -1.76
CAPN3-211ENST00000562199 DEFB119Q8N690 84 aa4.06□□□□□ -1.76
CAPN3-211ENST00000562199 Q8N8P6 123 aa4.06□□□□□ -1.76
CAPN3-211ENST00000562199 IMMP1LQ96LU5 166 aa4.06□□□□□ -1.76
CAPN3-211ENST00000562199 Q9H3A6 140 aa4.06□□□□□ -1.76
CAPN3-211ENST00000562199 NXT2Q9NPJ8 142 aaKnown RBP4.06□□□□□ -1.76
CAPN3-211ENST00000562199 HIGD1BQ9P298 99 aa4.06□□□□□ -1.76
CAPN3-211ENST00000562199 ARL2-SNX15V9GYD0 113 aa4.06□□□□□ -1.76
CAPN3-211ENST00000562199 MED12LQ86YW9 2145 aa4.06□□□□□ -1.76
CAPN3-211ENST00000562199 EML6Q6ZMW3 1958 aa4.05□□□□□ -1.76
CAPN3-211ENST00000562199 IGHV5-10-1A0A0J9YXX1 117 aa4.05□□□□□ -1.76
CAPN3-211ENST00000562199 ZFP36P26651 326 aaKnown RBP4.05□□□□□ -1.76
CAPN3-211ENST00000562199 ZNF816Q0VGE8 651 aaPredicted RBP4.05□□□□□ -1.76
CAPN3-211ENST00000562199 LINC01554Q52M75 96 aa4.05□□□□□ -1.76
CAPN3-211ENST00000562199 DIRC1Q969H9 104 aa4.05□□□□□ -1.76
CAPN3-211ENST00000562199 ZNF492Q9P255 531 aa4.05□□□□□ -1.76
CAPN3-211ENST00000562199 CEP192Q8TEP8 1941 aa4.04□□□□□ -1.76
CAPN3-211ENST00000562199 IGHV4-28A0A0C4DH34 117 aa4.04□□□□□ -1.76
CAPN3-211ENST00000562199 LY6G6EA0A0G2JKS1 128 aa4.04□□□□□ -1.76
CAPN3-211ENST00000562199 TMEM30CPA0ZSE6 113 aa4.04□□□□□ -1.76
CAPN3-211ENST00000562199 APCSP02743 223 aa4.04□□□□□ -1.76
CAPN3-211ENST00000562199 FRMD6-AS1P0C7T7 363 aa4.04□□□□□ -1.76
CAPN3-211ENST00000562199 ARL14EPLP0DKL9 152 aa4.04□□□□□ -1.76
CAPN3-211ENST00000562199 S100A4P26447 101 aaKnown RBP4.04□□□□□ -1.76
CAPN3-211ENST00000562199 GCHFRP30047 84 aa4.04□□□□□ -1.76
CAPN3-211ENST00000562199 RNASE4P34096 147 aaKnown RBP4.04□□□□□ -1.76
CAPN3-211ENST00000562199 PLA2G5P39877 138 aa4.04□□□□□ -1.76
CAPN3-211ENST00000562199 HERVK_113P61574 105 aa4.04□□□□□ -1.76
CAPN3-211ENST00000562199 RPL30P62888 115 aaKnown RBP4.04□□□□□ -1.76
CAPN3-211ENST00000562199 HOXA4Q00056 320 aaPredicted RBP4.04□□□□□ -1.76
CAPN3-211ENST00000562199 PSMG4Q5JS54 123 aa4.04□□□□□ -1.76
CAPN3-211ENST00000562199 GUSBP11Q6P575 273 aa4.04□□□□□ -1.76
CAPN3-211ENST00000562199 SLC25A29Q8N8R3 303 aa4.04□□□□□ -1.76
CAPN3-211ENST00000562199 CYSTM1Q9H1C7 97 aa4.04□□□□□ -1.76
CAPN3-211ENST00000562199 U3KQA8 63 aa4.04□□□□□ -1.76
CAPN3-211ENST00000562199 V9GYV3 84 aa4.04□□□□□ -1.76
CAPN3-211ENST00000562199 SHANK1Q9Y566 2161 aa4.04□□□□□ -1.76
CAPN3-211ENST00000562199 RP1P56715 2156 aa4.03□□□□□ -1.76
CAPN3-211ENST00000562199 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.03□□□□□ -1.76
CAPN3-211ENST00000562199 TRGV8A0A0C4DH27 118 aa4.03□□□□□ -1.76
CAPN3-211ENST00000562199 A0A1W2PS18 150 aa4.03□□□□□ -1.76
CAPN3-211ENST00000562199 C17orf98A8MV24 154 aa4.03□□□□□ -1.76
CAPN3-211ENST00000562199 F2Z2F3 143 aa4.03□□□□□ -1.76
CAPN3-211ENST00000562199 MRPL33O75394 65 aaKnown RBP4.03□□□□□ -1.76
CAPN3-211ENST00000562199 LTAP01374 205 aa4.03□□□□□ -1.76
CAPN3-211ENST00000562199 ACYP1P07311 99 aa4.03□□□□□ -1.76
CAPN3-211ENST00000562199 DEFA4P12838 97 aa4.03□□□□□ -1.76
CAPN3-211ENST00000562199 EFNA4P52798 201 aa4.03□□□□□ -1.76
CAPN3-211ENST00000562199 EDDM3BP56851 147 aa4.03□□□□□ -1.76
CAPN3-211ENST00000562199 SYNJ2BPP57105 145 aa4.03□□□□□ -1.76
CAPN3-211ENST00000562199 ZFP2Q6ZN57 461 aa4.03□□□□□ -1.76
CAPN3-211ENST00000562199 RNASE6Q93091 150 aaKnown RBP4.03□□□□□ -1.76
CAPN3-211ENST00000562199 FAM103A1Q9BTL3 118 aaKnown RBP4.03□□□□□ -1.76
CAPN3-211ENST00000562199 OSTCQ9NRP0 149 aa4.03□□□□□ -1.76
CAPN3-211ENST00000562199 HILPDAQ9Y5L2 63 aa4.03□□□□□ -1.76
CAPN3-211ENST00000562199 MYO7BQ6PIF6 2116 aa4.03□□□□□ -1.76
CAPN3-211ENST00000562199 POLEQ07864 2286 aa4.02□□□□□ -1.77
CAPN3-211ENST00000562199 LINC00473A8K010 186 aa4.02□□□□□ -1.77
CAPN3-211ENST00000562199 IBA57-AS1B1ANH7 110 aa4.02□□□□□ -1.77
CAPN3-211ENST00000562199 PRM2P04554 102 aa4.02□□□□□ -1.77
CAPN3-211ENST00000562199 CCKP06307 115 aa4.02□□□□□ -1.77
CAPN3-211ENST00000562199 SLC25A16P16260 332 aa4.02□□□□□ -1.77
CAPN3-211ENST00000562199 UBE2AP49459 152 aa4.02□□□□□ -1.77
CAPN3-211ENST00000562199 REG3AQ06141 175 aa4.02□□□□□ -1.77
CAPN3-211ENST00000562199 TMEM170BQ5T4T1 132 aa4.02□□□□□ -1.77
CAPN3-211ENST00000562199 CEMP1Q6PRD7 247 aaPredicted RBP4.02□□□□□ -1.77
CAPN3-211ENST00000562199 IGFL3Q6UXB1 125 aa4.02□□□□□ -1.77
CAPN3-211ENST00000562199 CD177Q8N6Q3 437 aa4.02□□□□□ -1.77
CAPN3-211ENST00000562199 UBALD1Q8TB05 177 aa4.02□□□□□ -1.77
CAPN3-211ENST00000562199 TMEM167BQ9NRX6 74 aa4.02□□□□□ -1.77
CAPN3-211ENST00000562199 ARHGAP21Q5T5U3 1957 aa4.02□□□□□ -1.77
CAPN3-211ENST00000562199 KIAA2026Q5HYC2 2103 aa4.01□□□□□ -1.77
CAPN3-211ENST00000562199 ARID1AO14497 2285 aa4.01□□□□□ -1.77
CAPN3-211ENST00000562199 IGHV3OR16-12A0A075B7B8 117 aa4.01□□□□□ -1.77
CAPN3-211ENST00000562199 IGHV1-24A0A0C4DH33 117 aa4.01□□□□□ -1.77
CAPN3-211ENST00000562199 SMIM27A0A1W2PRY6 76 aa4.01□□□□□ -1.77
CAPN3-211ENST00000562199 PINLYPA6NC86 204 aa4.01□□□□□ -1.77
CAPN3-211ENST00000562199 C2orf70A6NJV1 201 aa4.01□□□□□ -1.77
CAPN3-211ENST00000562199 IQCF6A8MYZ5 107 aa4.01□□□□□ -1.77
CAPN3-211ENST00000562199 BMPR1BO00238 502 aa4.01□□□□□ -1.77
CAPN3-211ENST00000562199 IGHV4-30-4P0DP06 118 aa4.01□□□□□ -1.77
CAPN3-211ENST00000562199 CCL4P13236 92 aa4.01□□□□□ -1.77
CAPN3-211ENST00000562199 FUSP35637 526 aaKnown RBP eCLIP4.01□□□□□ -1.77
CAPN3-211ENST00000562199 BLCAPP62952 87 aa4.01□□□□□ -1.77
CAPN3-211ENST00000562199 CIRBPQ14011 172 aaKnown RBP4.01□□□□□ -1.77
CAPN3-211ENST00000562199 TWIST1Q15672 202 aa4.01□□□□□ -1.77
CAPN3-211ENST00000562199 SPINK9Q5DT21 86 aa4.01□□□□□ -1.77
CAPN3-211ENST00000562199 Q6YL49 198 aa4.01□□□□□ -1.77
CAPN3-211ENST00000562199 SCXQ7RTU7 201 aa4.01□□□□□ -1.77
CAPN3-211ENST00000562199 ZNF714Q96N38 554 aa4.01□□□□□ -1.77
CAPN3-211ENST00000562199 F5P12259 2224 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms