RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 SNURFLB1AK76 121 aa7.97□□□□□ -1.13
TMEM260-208ENST00000555905 OR5AL1P0C617 328 aa7.97□□□□□ -1.13
TMEM260-208ENST00000555905 RNASE3P12724 160 aaKnown RBP7.97□□□□□ -1.13
TMEM260-208ENST00000555905 MIFP14174 115 aa7.97□□□□□ -1.13
TMEM260-208ENST00000555905 CTRLP40313 264 aa7.97□□□□□ -1.13
TMEM260-208ENST00000555905 FOXA3P55318 350 aaPredicted RBP7.97□□□□□ -1.13
TMEM260-208ENST00000555905 TMEM88Q6PEY1 159 aa7.97□□□□□ -1.13
TMEM260-208ENST00000555905 LYZL1Q6UWQ5 148 aa7.97□□□□□ -1.13
TMEM260-208ENST00000555905 CBLN2Q8IUK8 224 aa7.97□□□□□ -1.13
TMEM260-208ENST00000555905 SBSPONQ8IVN8 264 aa7.97□□□□□ -1.13
TMEM260-208ENST00000555905 NUP35Q8NFH5 326 aa7.97□□□□□ -1.13
TMEM260-208ENST00000555905 RNASE8Q8TDE3 154 aaKnown RBP7.97□□□□□ -1.13
TMEM260-208ENST00000555905 OVOL2Q9BRP0 275 aa7.97□□□□□ -1.13
TMEM260-208ENST00000555905 SPXQ9BT56 116 aa7.97□□□□□ -1.13
TMEM260-208ENST00000555905 GSN-AS1Q9NRJ2 163 aa7.97□□□□□ -1.13
TMEM260-208ENST00000555905 PHLDA3Q9Y5J5 127 aa7.97□□□□□ -1.13
TMEM260-208ENST00000555905 TRAV9-1A0A075B6T8 112 aa7.96□□□□□ -1.14
TMEM260-208ENST00000555905 SNAI2O43623 268 aa7.96□□□□□ -1.14
TMEM260-208ENST00000555905 SCO1O75880 301 aa7.96□□□□□ -1.14
TMEM260-208ENST00000555905 CACNG7P62955 275 aa7.96□□□□□ -1.14
TMEM260-208ENST00000555905 DEFA6Q01524 100 aa7.96□□□□□ -1.14
TMEM260-208ENST00000555905 SPANXN1Q5VSR9 72 aa7.96□□□□□ -1.14
TMEM260-208ENST00000555905 C11orf72Q8NBR9 251 aa7.96□□□□□ -1.14
TMEM260-208ENST00000555905 BTF3L4Q96K17 158 aa7.96□□□□□ -1.14
TMEM260-208ENST00000555905 C9orf85Q96MD7 179 aa7.96□□□□□ -1.14
TMEM260-208ENST00000555905 SPATA25Q9BR10 227 aa7.96□□□□□ -1.14
TMEM260-208ENST00000555905 SSBP4Q9BWG4 385 aaPredicted RBP7.96□□□□□ -1.14
TMEM260-208ENST00000555905 SCRT2Q9NQ03 307 aa7.96□□□□□ -1.14
TMEM260-208ENST00000555905 A0A1B0GUT8 65 aa7.95□□□□□ -1.14
TMEM260-208ENST00000555905 RIGQ13278 110 aa7.95□□□□□ -1.14
TMEM260-208ENST00000555905 WDR73Q6P4I2 378 aa7.95□□□□□ -1.14
TMEM260-208ENST00000555905 ZFP82Q8N141 532 aa7.95□□□□□ -1.14
TMEM260-208ENST00000555905 SYT8Q8NBV8 401 aa7.95□□□□□ -1.14
TMEM260-208ENST00000555905 TM2D3Q9BRN9 247 aa7.95□□□□□ -1.14
TMEM260-208ENST00000555905 ZMAT4Q9H898 229 aa7.95□□□□□ -1.14
TMEM260-208ENST00000555905 RETNQ9HD89 108 aa7.95□□□□□ -1.14
TMEM260-208ENST00000555905 IGHV4-28A0A0C4DH34 117 aa7.94□□□□□ -1.14
TMEM260-208ENST00000555905 MUC21A0A0G2JKD1 596 aa7.94□□□□□ -1.14
TMEM260-208ENST00000555905 MUC21A0A140T8X8 626 aa7.94□□□□□ -1.14
TMEM260-208ENST00000555905 M0R2P5 195 aa7.94□□□□□ -1.14
TMEM260-208ENST00000555905 M0R381 172 aa7.94□□□□□ -1.14
TMEM260-208ENST00000555905 SPINK4O60575 86 aa7.94□□□□□ -1.14
TMEM260-208ENST00000555905 EMP1P54849 157 aa7.94□□□□□ -1.14
TMEM260-208ENST00000555905 SSTP61278 116 aa7.94□□□□□ -1.14
TMEM260-208ENST00000555905 DAZ2Q13117 558 aaKnown RBP7.94□□□□□ -1.14
TMEM260-208ENST00000555905 ELOBQ15370 118 aa7.94□□□□□ -1.14
TMEM260-208ENST00000555905 TWIST1Q15672 202 aa7.94□□□□□ -1.14
TMEM260-208ENST00000555905 ATP5L2Q7Z4Y8 100 aa7.94□□□□□ -1.14
TMEM260-208ENST00000555905 OR10AG1Q8NH19 301 aa7.94□□□□□ -1.14
TMEM260-208ENST00000555905 B9D2Q9BPU9 175 aa7.94□□□□□ -1.14
TMEM260-208ENST00000555905 CNFNQ9BYD5 112 aa7.94□□□□□ -1.14
TMEM260-208ENST00000555905 NBEAL2Q6ZNJ1 2754 aa7.94□□□□□ -1.14
TMEM260-208ENST00000555905 A0A1B0GW15 77 aa7.93□□□□□ -1.14
TMEM260-208ENST00000555905 S100A8P05109 93 aa7.93□□□□□ -1.14
TMEM260-208ENST00000555905 NTF3P20783 257 aa7.93□□□□□ -1.14
TMEM260-208ENST00000555905 ZNF876PQ49A33 203 aa7.93□□□□□ -1.14
TMEM260-208ENST00000555905 MRPL54Q6P161 138 aaKnown RBP7.93□□□□□ -1.14
TMEM260-208ENST00000555905 Q8NAQ8 132 aa7.93□□□□□ -1.14
TMEM260-208ENST00000555905 IL17DQ8TAD2 202 aa7.93□□□□□ -1.14
TMEM260-208ENST00000555905 PTH2Q96A98 100 aa7.93□□□□□ -1.14
TMEM260-208ENST00000555905 NOP10Q9NPE3 64 aaKnown RBP7.93□□□□□ -1.14
TMEM260-208ENST00000555905 TRBV24-1A0A075B6N3 115 aa7.92□□□□□ -1.14
TMEM260-208ENST00000555905 IGHV4-4A0A075B6R2 117 aa7.92□□□□□ -1.14
TMEM260-208ENST00000555905 TRGV1A0A0A0MS02 117 aa7.92□□□□□ -1.14
TMEM260-208ENST00000555905 TGIF2-C20orf24A0A0A6YYL0 155 aa7.92□□□□□ -1.14
TMEM260-208ENST00000555905 PLAC8L1A1L4L8 177 aa7.92□□□□□ -1.14
TMEM260-208ENST00000555905 NXPH4O95158 308 aa7.92□□□□□ -1.14
TMEM260-208ENST00000555905 HBBP68871 147 aa7.92□□□□□ -1.14
TMEM260-208ENST00000555905 LGALS9BQ3B8N2 356 aa7.92□□□□□ -1.14
TMEM260-208ENST00000555905 PIK3CD-AS1Q5SR53 167 aa7.92□□□□□ -1.14
TMEM260-208ENST00000555905 SMIM15Q7Z3B0 74 aa7.92□□□□□ -1.14
TMEM260-208ENST00000555905 MUC4Q99102 2169 aa7.92□□□□□ -1.14
TMEM260-208ENST00000555905 LYRM9A8MSI8 78 aa7.91□□□□□ -1.14
TMEM260-208ENST00000555905 DEFB4AO15263 64 aa7.91□□□□□ -1.14
TMEM260-208ENST00000555905 TRGC1P0CF51 173 aa7.91□□□□□ -1.14
TMEM260-208ENST00000555905 CAMPP49913 170 aa7.91□□□□□ -1.14
TMEM260-208ENST00000555905 RASL11AQ6T310 242 aa7.91□□□□□ -1.14
TMEM260-208ENST00000555905 RASL10AQ92737 203 aa7.91□□□□□ -1.14
TMEM260-208ENST00000555905 FAM210BQ96KR6 192 aa7.91□□□□□ -1.14
TMEM260-208ENST00000555905 YPEL4Q96NS1 127 aa7.91□□□□□ -1.14
TMEM260-208ENST00000555905 AP1S3Q96PC3 154 aa7.91□□□□□ -1.14
TMEM260-208ENST00000555905 NDUFAF3Q9BU61 184 aa7.91□□□□□ -1.14
TMEM260-208ENST00000555905 MRPL16Q9NX20 251 aaKnown RBP7.91□□□□□ -1.14
TMEM260-208ENST00000555905 TEX48A0A1B0GUV7 120 aa7.9□□□□□ -1.14
TMEM260-208ENST00000555905 A0A1B0GXF2 115 aa7.9□□□□□ -1.14
TMEM260-208ENST00000555905 FAM229AH3BQW9 127 aa7.9□□□□□ -1.14
TMEM260-208ENST00000555905 NHLRC4P0CG21 123 aaPredicted RBP7.9□□□□□ -1.14
TMEM260-208ENST00000555905 SMIM17P0DL12 118 aa7.9□□□□□ -1.14
TMEM260-208ENST00000555905 RAB4BP61018 213 aa7.9□□□□□ -1.14
TMEM260-208ENST00000555905 COX19Q49B96 90 aa7.9□□□□□ -1.14
TMEM260-208ENST00000555905 Q6ZTI0 123 aa7.9□□□□□ -1.14
TMEM260-208ENST00000555905 C11orf68Q9H3H3 251 aaKnown RBP7.9□□□□□ -1.14
TMEM260-208ENST00000555905 MSRB1Q9NZV6 116 aa7.9□□□□□ -1.14
TMEM260-208ENST00000555905 TRGV2A0A075B6R0 118 aa7.89□□□□□ -1.15
TMEM260-208ENST00000555905 COLCA2A8K830 154 aa7.89□□□□□ -1.15
TMEM260-208ENST00000555905 A8MWV9 139 aa7.89□□□□□ -1.15
TMEM260-208ENST00000555905 SPART-AS1P0CW21 52 aa7.89□□□□□ -1.15
TMEM260-208ENST00000555905 FAM222AQ5U5X8 452 aa7.89□□□□□ -1.15
TMEM260-208ENST00000555905 DKK2Q9UBU2 259 aa7.89□□□□□ -1.15
TMEM260-208ENST00000555905 MEGF8Q7Z7M0 2845 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms