RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 GNRH2O43555 120 aa8.11□□□□□ -1.11
SHMT2-220ENST00000555634 ARMS2P0C7Q2 107 aa8.11□□□□□ -1.11
SHMT2-220ENST00000555634 NHLRC4P0CG21 123 aaPredicted RBP8.11□□□□□ -1.11
SHMT2-220ENST00000555634 EMP1P54849 157 aa8.11□□□□□ -1.11
SHMT2-220ENST00000555634 COX19Q49B96 90 aa8.11□□□□□ -1.11
SHMT2-220ENST00000555634 Q6ZQT7 251 aa8.11□□□□□ -1.11
SHMT2-220ENST00000555634 GSN-AS1Q9NRJ2 163 aa8.11□□□□□ -1.11
SHMT2-220ENST00000555634 URGCP-MRPS24S4R325 110 aa8.11□□□□□ -1.11
SHMT2-220ENST00000555634 IGHV4-28A0A0C4DH34 117 aa8.1□□□□□ -1.11
SHMT2-220ENST00000555634 LYRM9A8MSI8 78 aa8.1□□□□□ -1.11
SHMT2-220ENST00000555634 SNAI2O43623 268 aa8.1□□□□□ -1.11
SHMT2-220ENST00000555634 IGLC6P0CF74 106 aa8.1□□□□□ -1.11
SHMT2-220ENST00000555634 HBBP68871 147 aa8.1□□□□□ -1.11
SHMT2-220ENST00000555634 TWIST1Q15672 202 aa8.1□□□□□ -1.11
SHMT2-220ENST00000555634 LGALS9BQ3B8N2 356 aa8.1□□□□□ -1.11
SHMT2-220ENST00000555634 PIK3CD-AS1Q5SR53 167 aa8.1□□□□□ -1.11
SHMT2-220ENST00000555634 WDR73Q6P4I2 378 aa8.1□□□□□ -1.11
SHMT2-220ENST00000555634 LYZL1Q6UWQ5 148 aa8.1□□□□□ -1.11
SHMT2-220ENST00000555634 SBSPONQ8IVN8 264 aa8.1□□□□□ -1.11
SHMT2-220ENST00000555634 C9orf85Q96MD7 179 aa8.1□□□□□ -1.11
SHMT2-220ENST00000555634 TM2D3Q9BRN9 247 aa8.1□□□□□ -1.11
SHMT2-220ENST00000555634 OVOL2Q9BRP0 275 aa8.1□□□□□ -1.11
SHMT2-220ENST00000555634 C11orf68Q9H3H3 251 aaKnown RBP8.1□□□□□ -1.11
SHMT2-220ENST00000555634 TP53TG3Q9ULZ0 132 aa8.1□□□□□ -1.11
SHMT2-220ENST00000555634 X6R8D5 127 aa8.1□□□□□ -1.11
SHMT2-220ENST00000555634 TRGV2A0A075B6R0 118 aa8.09□□□□□ -1.11
SHMT2-220ENST00000555634 TRGV1A0A0A0MS02 117 aa8.09□□□□□ -1.11
SHMT2-220ENST00000555634 A8MWV9 139 aa8.09□□□□□ -1.11
SHMT2-220ENST00000555634 RNASE3P12724 160 aaKnown RBP8.09□□□□□ -1.11
SHMT2-220ENST00000555634 FOXA3P55318 350 aaPredicted RBP8.09□□□□□ -1.11
SHMT2-220ENST00000555634 RAB4BP61018 213 aa8.09□□□□□ -1.11
SHMT2-220ENST00000555634 DAZ2Q13117 558 aaKnown RBP8.09□□□□□ -1.11
SHMT2-220ENST00000555634 ZNF876PQ49A33 203 aa8.09□□□□□ -1.11
SHMT2-220ENST00000555634 RASL11AQ6T310 242 aa8.09□□□□□ -1.11
SHMT2-220ENST00000555634 C11orf72Q8NBR9 251 aa8.09□□□□□ -1.11
SHMT2-220ENST00000555634 NUP35Q8NFH5 326 aa8.09□□□□□ -1.11
SHMT2-220ENST00000555634 GTSF1Q8WW33 167 aa8.09□□□□□ -1.11
SHMT2-220ENST00000555634 RETNQ9HD89 108 aa8.09□□□□□ -1.11
SHMT2-220ENST00000555634 MDFICQ9P1T7 246 aa8.09□□□□□ -1.11
SHMT2-220ENST00000555634 RHODO00212 210 aa8.08□□□□□ -1.12
SHMT2-220ENST00000555634 MT-ND6P03923 174 aa8.08□□□□□ -1.12
SHMT2-220ENST00000555634 SPART-AS1P0CW21 52 aa8.08□□□□□ -1.12
SHMT2-220ENST00000555634 AZU1P20160 251 aa8.08□□□□□ -1.12
SHMT2-220ENST00000555634 FAM3BP58499 235 aaPredicted RBP8.08□□□□□ -1.12
SHMT2-220ENST00000555634 MRPL54Q6P161 138 aaKnown RBP8.08□□□□□ -1.12
SHMT2-220ENST00000555634 TMEM88Q6PEY1 159 aa8.08□□□□□ -1.12
SHMT2-220ENST00000555634 CBLN2Q8IUK8 224 aa8.08□□□□□ -1.12
SHMT2-220ENST00000555634 OR10AG1Q8NH19 301 aa8.08□□□□□ -1.12
SHMT2-220ENST00000555634 NOP10Q9NPE3 64 aaKnown RBP8.08□□□□□ -1.12
SHMT2-220ENST00000555634 SCRT2Q9NQ03 307 aa8.08□□□□□ -1.12
SHMT2-220ENST00000555634 SPINK4O60575 86 aa8.07□□□□□ -1.12
SHMT2-220ENST00000555634 NXPH4O95158 308 aa8.07□□□□□ -1.12
SHMT2-220ENST00000555634 SSTP61278 116 aa8.07□□□□□ -1.12
SHMT2-220ENST00000555634 DAD1P61803 113 aa8.07□□□□□ -1.12
SHMT2-220ENST00000555634 ATRAIDQ6UW56 229 aa8.07□□□□□ -1.12
SHMT2-220ENST00000555634 Q8NAQ8 132 aa8.07□□□□□ -1.12
SHMT2-220ENST00000555634 PTH2Q96A98 100 aa8.07□□□□□ -1.12
SHMT2-220ENST00000555634 SSBP4Q9BWG4 385 aaPredicted RBP8.07□□□□□ -1.12
SHMT2-220ENST00000555634 CNFNQ9BYD5 112 aa8.07□□□□□ -1.12
SHMT2-220ENST00000555634 MRPL16Q9NX20 251 aaKnown RBP8.07□□□□□ -1.12
SHMT2-220ENST00000555634 CIDEAO60543 219 aa8.06□□□□□ -1.12
SHMT2-220ENST00000555634 NTF3P20783 257 aa8.06□□□□□ -1.12
SHMT2-220ENST00000555634 CAMPP49913 170 aa8.06□□□□□ -1.12
SHMT2-220ENST00000555634 IL17DQ8TAD2 202 aa8.06□□□□□ -1.12
SHMT2-220ENST00000555634 MUC4Q99102 2169 aa8.05□□□□□ -1.12
SHMT2-220ENST00000555634 TRBV24-1A0A075B6N3 115 aa8.05□□□□□ -1.12
SHMT2-220ENST00000555634 IGHV4-4A0A075B6R2 117 aa8.05□□□□□ -1.12
SHMT2-220ENST00000555634 MUC21A0A0G2JKD1 596 aa8.05□□□□□ -1.12
SHMT2-220ENST00000555634 MUC21A0A140T8X8 626 aa8.05□□□□□ -1.12
SHMT2-220ENST00000555634 GAGE12BA1L429 117 aa8.05□□□□□ -1.12
SHMT2-220ENST00000555634 GAGE7O76087 117 aa8.05□□□□□ -1.12
SHMT2-220ENST00000555634 HLA-DQA1P01909 254 aa8.05□□□□□ -1.12
SHMT2-220ENST00000555634 MGPP08493 103 aa8.05□□□□□ -1.12
SHMT2-220ENST00000555634 GAGE12FP0CL80 117 aa8.05□□□□□ -1.12
SHMT2-220ENST00000555634 GAGE12GP0CL81 117 aa8.05□□□□□ -1.12
SHMT2-220ENST00000555634 GAGE12IP0CL82 117 aa8.05□□□□□ -1.12
SHMT2-220ENST00000555634 DEFB130BP0DP73 79 aa8.05□□□□□ -1.12
SHMT2-220ENST00000555634 DEFB130AP0DP74 79 aa8.05□□□□□ -1.12
SHMT2-220ENST00000555634 ELOBQ15370 118 aa8.05□□□□□ -1.12
SHMT2-220ENST00000555634 ZNF56Q15929 161 aa8.05□□□□□ -1.12
SHMT2-220ENST00000555634 FAM74A4Q5TZK3 123 aa8.05□□□□□ -1.12
SHMT2-220ENST00000555634 FAM222AQ5U5X8 452 aa8.05□□□□□ -1.12
SHMT2-220ENST00000555634 OR4C5Q8NGB2 326 aa8.05□□□□□ -1.12
SHMT2-220ENST00000555634 RASL10AQ92737 203 aa8.05□□□□□ -1.12
SHMT2-220ENST00000555634 FAM210BQ96KR6 192 aa8.05□□□□□ -1.12
SHMT2-220ENST00000555634 DPH3P1Q9H4G8 78 aa8.05□□□□□ -1.12
SHMT2-220ENST00000555634 TRAV4A0A0B4J268 109 aa8.04□□□□□ -1.12
SHMT2-220ENST00000555634 A0A0J9YWU9 116 aa8.04□□□□□ -1.12
SHMT2-220ENST00000555634 H7C1H1 209 aa8.04□□□□□ -1.12
SHMT2-220ENST00000555634 DEFB4AO15263 64 aa8.04□□□□□ -1.12
SHMT2-220ENST00000555634 PRM2P04554 102 aa8.04□□□□□ -1.12
SHMT2-220ENST00000555634 Q6ZTI0 123 aa8.04□□□□□ -1.12
SHMT2-220ENST00000555634 FRZBQ92765 325 aa8.04□□□□□ -1.12
SHMT2-220ENST00000555634 DKK2Q9UBU2 259 aa8.04□□□□□ -1.12
SHMT2-220ENST00000555634 TGIF2-C20orf24A0A0A6YYL0 155 aa8.03□□□□□ -1.12
SHMT2-220ENST00000555634 PLAC8L1A1L4L8 177 aa8.03□□□□□ -1.12
SHMT2-220ENST00000555634 F5H697 171 aa8.03□□□□□ -1.12
SHMT2-220ENST00000555634 SCO1O75880 301 aa8.03□□□□□ -1.12
SHMT2-220ENST00000555634 DMRTA1Q5VZB9 504 aa8.03□□□□□ -1.12
SHMT2-220ENST00000555634 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms