RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 TWIST1Q15672 202 aa7.61□□□□□ -1.19
TMEM55B-205ENST00000554028 MRPL54Q6P161 138 aaKnown RBP7.61□□□□□ -1.19
TMEM55B-205ENST00000554028 RASL11AQ6T310 242 aa7.61□□□□□ -1.19
TMEM55B-205ENST00000554028 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.61□□□□□ -1.19
TMEM55B-205ENST00000554028 CSNK1G2-AS1Q8NCQ2 148 aa7.61□□□□□ -1.19
TMEM55B-205ENST00000554028 SPXQ9BT56 116 aa7.61□□□□□ -1.19
TMEM55B-205ENST00000554028 SSBP4Q9BWG4 385 aaPredicted RBP7.61□□□□□ -1.19
TMEM55B-205ENST00000554028 COLCA2A8K830 154 aa7.6□□□□□ -1.19
TMEM55B-205ENST00000554028 SNURFLB1AK76 121 aa7.6□□□□□ -1.19
TMEM55B-205ENST00000554028 SNAI2O43623 268 aa7.6□□□□□ -1.19
TMEM55B-205ENST00000554028 FRMD6-AS1P0C7T7 363 aa7.6□□□□□ -1.19
TMEM55B-205ENST00000554028 RAB4BP61018 213 aa7.6□□□□□ -1.19
TMEM55B-205ENST00000554028 HBBP68871 147 aa7.6□□□□□ -1.19
TMEM55B-205ENST00000554028 DEFB135Q30KP9 77 aa7.6□□□□□ -1.19
TMEM55B-205ENST00000554028 ZNF705AQ6ZN79 300 aaPredicted RBP7.6□□□□□ -1.19
TMEM55B-205ENST00000554028 ZFP82Q8N141 532 aa7.6□□□□□ -1.19
TMEM55B-205ENST00000554028 TMEM263Q8WUH6 116 aaKnown RBP7.6□□□□□ -1.19
TMEM55B-205ENST00000554028 C16orf74Q96GX8 76 aa7.6□□□□□ -1.19
TMEM55B-205ENST00000554028 MDFICQ9P1T7 246 aa7.6□□□□□ -1.19
TMEM55B-205ENST00000554028 TP53TG3Q9ULZ0 132 aa7.6□□□□□ -1.19
TMEM55B-205ENST00000554028 M0R381 172 aa7.59□□□□□ -1.19
TMEM55B-205ENST00000554028 SPRY2O43597 315 aa7.59□□□□□ -1.19
TMEM55B-205ENST00000554028 TRGC1P0CF51 173 aa7.59□□□□□ -1.19
TMEM55B-205ENST00000554028 RNASE3P12724 160 aaKnown RBP7.59□□□□□ -1.19
TMEM55B-205ENST00000554028 RAB5AP20339 215 aa7.59□□□□□ -1.19
TMEM55B-205ENST00000554028 NTF3P20783 257 aa7.59□□□□□ -1.19
TMEM55B-205ENST00000554028 RPS10P46783 165 aaKnown RBP7.59□□□□□ -1.19
TMEM55B-205ENST00000554028 CAMPP49913 170 aa7.59□□□□□ -1.19
TMEM55B-205ENST00000554028 RNF183Q96D59 192 aa7.59□□□□□ -1.19
TMEM55B-205ENST00000554028 TP53TG1Q9Y2A0 90 aa7.59□□□□□ -1.19
TMEM55B-205ENST00000554028 IGHV4-4A0A075B6R2 117 aa7.58□□□□□ -1.2
TMEM55B-205ENST00000554028 MUC21A0A0G2JKD1 596 aa7.58□□□□□ -1.2
TMEM55B-205ENST00000554028 MUC21A0A140T8X8 626 aa7.58□□□□□ -1.2
TMEM55B-205ENST00000554028 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.58□□□□□ -1.2
TMEM55B-205ENST00000554028 M0R2P5 195 aa7.58□□□□□ -1.2
TMEM55B-205ENST00000554028 PRB2P02812 416 aaPredicted RBP7.58□□□□□ -1.2
TMEM55B-205ENST00000554028 MT-ND6P03923 174 aa7.58□□□□□ -1.2
TMEM55B-205ENST00000554028 SMIM17P0DL12 118 aa7.58□□□□□ -1.2
TMEM55B-205ENST00000554028 ZNF876PQ49A33 203 aa7.58□□□□□ -1.2
TMEM55B-205ENST00000554028 ZNF575Q86XF7 245 aa7.58□□□□□ -1.2
TMEM55B-205ENST00000554028 OR11H2Q8NH07 326 aa7.58□□□□□ -1.2
TMEM55B-205ENST00000554028 OR10AG1Q8NH19 301 aa7.58□□□□□ -1.2
TMEM55B-205ENST00000554028 C9orf85Q96MD7 179 aa7.58□□□□□ -1.2
TMEM55B-205ENST00000554028 YPEL4Q96NS1 127 aa7.58□□□□□ -1.2
TMEM55B-205ENST00000554028 CNFNQ9BYD5 112 aa7.58□□□□□ -1.2
TMEM55B-205ENST00000554028 KRTAP9-2Q9BYQ4 174 aa7.58□□□□□ -1.2
TMEM55B-205ENST00000554028 SCRT2Q9NQ03 307 aa7.58□□□□□ -1.2
TMEM55B-205ENST00000554028 GSN-AS1Q9NRJ2 163 aa7.58□□□□□ -1.2
TMEM55B-205ENST00000554028 AGRNO00468 2067 aa7.58□□□□□ -1.2
TMEM55B-205ENST00000554028 K7EIL1 84 aa7.57□□□□□ -1.2
TMEM55B-205ENST00000554028 HLA-DQA1P01909 254 aa7.57□□□□□ -1.2
TMEM55B-205ENST00000554028 MIFP14174 115 aa7.57□□□□□ -1.2
TMEM55B-205ENST00000554028 AZU1P20160 251 aa7.57□□□□□ -1.2
TMEM55B-205ENST00000554028 FRZBQ92765 325 aa7.57□□□□□ -1.2
TMEM55B-205ENST00000554028 PTH2Q96A98 100 aa7.57□□□□□ -1.2
TMEM55B-205ENST00000554028 GNB1LQ9BYB4 327 aa7.57□□□□□ -1.2
TMEM55B-205ENST00000554028 TRAPPC1Q9Y5R8 145 aa7.57□□□□□ -1.2
TMEM55B-205ENST00000554028 A0A1B0GXF2 115 aa7.56□□□□□ -1.2
TMEM55B-205ENST00000554028 PRM2P04554 102 aa7.56□□□□□ -1.2
TMEM55B-205ENST00000554028 DAZ2Q13117 558 aaKnown RBP7.56□□□□□ -1.2
TMEM55B-205ENST00000554028 PIK3CD-AS1Q5SR53 167 aa7.56□□□□□ -1.2
TMEM55B-205ENST00000554028 MRAPQ8TCY5 172 aa7.56□□□□□ -1.2
TMEM55B-205ENST00000554028 RNASE8Q8TDE3 154 aaKnown RBP7.56□□□□□ -1.2
TMEM55B-205ENST00000554028 AP1S3Q96PC3 154 aa7.56□□□□□ -1.2
TMEM55B-205ENST00000554028 NDUFAF3Q9BU61 184 aa7.56□□□□□ -1.2
TMEM55B-205ENST00000554028 NBEAL1Q6ZS30 2694 aa7.55□□□□□ -1.2
TMEM55B-205ENST00000554028 APCSP02743 223 aa7.55□□□□□ -1.2
TMEM55B-205ENST00000554028 EMP1P54849 157 aa7.55□□□□□ -1.2
TMEM55B-205ENST00000554028 FABP9Q0Z7S8 132 aa7.55□□□□□ -1.2
TMEM55B-205ENST00000554028 LGALS9BQ3B8N2 356 aa7.55□□□□□ -1.2
TMEM55B-205ENST00000554028 TMEM136Q6ZRR5 245 aa7.55□□□□□ -1.2
TMEM55B-205ENST00000554028 C11orf72Q8NBR9 251 aa7.55□□□□□ -1.2
TMEM55B-205ENST00000554028 SPATA25Q9BR10 227 aa7.55□□□□□ -1.2
TMEM55B-205ENST00000554028 TMEM191AQ9H0A3 160 aa7.55□□□□□ -1.2
TMEM55B-205ENST00000554028 NOP10Q9NPE3 64 aaKnown RBP7.55□□□□□ -1.2
TMEM55B-205ENST00000554028 TRGV1A0A0A0MS02 117 aa7.54□□□□□ -1.2
TMEM55B-205ENST00000554028 KRTAP9-6A0A140TA67 174 aa7.54□□□□□ -1.2
TMEM55B-205ENST00000554028 A8MWV9 139 aa7.54□□□□□ -1.2
TMEM55B-205ENST00000554028 NXPH4O95158 308 aa7.54□□□□□ -1.2
TMEM55B-205ENST00000554028 OVOL2Q9BRP0 275 aa7.54□□□□□ -1.2
TMEM55B-205ENST00000554028 MRPL18Q9H0U6 180 aaKnown RBP7.54□□□□□ -1.2
TMEM55B-205ENST00000554028 DPH3P1Q9H4G8 78 aa7.54□□□□□ -1.2
TMEM55B-205ENST00000554028 ZMAT4Q9H898 229 aa7.54□□□□□ -1.2
TMEM55B-205ENST00000554028 MSRB1Q9NZV6 116 aa7.54□□□□□ -1.2
TMEM55B-205ENST00000554028 X6R8D5 127 aa7.54□□□□□ -1.2
TMEM55B-205ENST00000554028 TRRAPQ9Y4A5 3859 aa7.54□□□□□ -1.2
TMEM55B-205ENST00000554028 PKD1L1Q8TDX9 2849 aa7.53□□□□□ -1.2
TMEM55B-205ENST00000554028 IGHV4-28A0A0C4DH34 117 aa7.53□□□□□ -1.2
TMEM55B-205ENST00000554028 TEX48A0A1B0GUV7 120 aa7.53□□□□□ -1.2
TMEM55B-205ENST00000554028 C1orf196B1AJZ1 125 aa7.53□□□□□ -1.2
TMEM55B-205ENST00000554028 SBSPONQ8IVN8 264 aa7.53□□□□□ -1.2
TMEM55B-205ENST00000554028 GATD1Q8NB37 220 aa7.53□□□□□ -1.2
TMEM55B-205ENST00000554028 RASL10AQ92737 203 aa7.53□□□□□ -1.2
TMEM55B-205ENST00000554028 MRPL16Q9NX20 251 aaKnown RBP7.53□□□□□ -1.2
TMEM55B-205ENST00000554028 TRGV2A0A075B6R0 118 aa7.52□□□□□ -1.21
TMEM55B-205ENST00000554028 LYRM9A8MSI8 78 aa7.52□□□□□ -1.21
TMEM55B-205ENST00000554028 F5H697 171 aa7.52□□□□□ -1.21
TMEM55B-205ENST00000554028 RHODO00212 210 aa7.52□□□□□ -1.21
TMEM55B-205ENST00000554028 CIDEAO60543 219 aa7.52□□□□□ -1.21
TMEM55B-205ENST00000554028 TRGC2P03986 189 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms