RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 ARL2BPQ9Y2Y0 163 aa1.45□□□□□ -2.18
SNHG1-224ENST00000545688 LSM2Q9Y333 95 aaKnown RBP1.45□□□□□ -2.18
SNHG1-224ENST00000545688 AP4S1Q9Y587 144 aa1.45□□□□□ -2.18
SNHG1-224ENST00000545688 USH2AO75445 5202 aa1.45□□□□□ -2.18
SNHG1-224ENST00000545688 SYNE2Q8WXH0 6885 aaKnown RBP1.44□□□□□ -2.18
SNHG1-224ENST00000545688 IGKV1OR2-108A0A075B7D4 117 aa1.44□□□□□ -2.18
SNHG1-224ENST00000545688 TRAV1-2A0A0B4J238 106 aa1.44□□□□□ -2.18
SNHG1-224ENST00000545688 A0A0D9SG52 128 aa1.44□□□□□ -2.18
SNHG1-224ENST00000545688 PNMA8CA0A1B0GUJ8 204 aa1.44□□□□□ -2.18
SNHG1-224ENST00000545688 IRGMA1A4Y4 181 aa1.44□□□□□ -2.18
SNHG1-224ENST00000545688 RBFOX3A6NFN3 312 aa1.44□□□□□ -2.18
SNHG1-224ENST00000545688 IFITM5A6NNB3 132 aa1.44□□□□□ -2.18
SNHG1-224ENST00000545688 KRBOX1C9JBD0 128 aa1.44□□□□□ -2.18
SNHG1-224ENST00000545688 LECT2O14960 151 aa1.44□□□□□ -2.18
SNHG1-224ENST00000545688 IGKV1-5P01602 117 aa1.44□□□□□ -2.18
SNHG1-224ENST00000545688 MYL12AP19105 171 aa1.44□□□□□ -2.18
SNHG1-224ENST00000545688 CXCL3P19876 107 aa1.44□□□□□ -2.18
SNHG1-224ENST00000545688 GADD45AP24522 165 aa1.44□□□□□ -2.18
SNHG1-224ENST00000545688 PSMA1P25786 263 aaKnown RBP1.44□□□□□ -2.18
SNHG1-224ENST00000545688 SNCAP37840 140 aa1.44□□□□□ -2.18
SNHG1-224ENST00000545688 HTR2BP41595 481 aa1.44□□□□□ -2.18
SNHG1-224ENST00000545688 ARPC4P59998 168 aa1.44□□□□□ -2.18
SNHG1-224ENST00000545688 CNBPP62633 177 aaKnown RBP1.44□□□□□ -2.18
SNHG1-224ENST00000545688 ZNF90Q03938 601 aa1.44□□□□□ -2.18
SNHG1-224ENST00000545688 ST3GAL4Q11206 333 aa1.44□□□□□ -2.18
SNHG1-224ENST00000545688 PSG3Q16557 428 aa1.44□□□□□ -2.18
SNHG1-224ENST00000545688 SPINK6Q6UWN8 80 aa1.44□□□□□ -2.18
SNHG1-224ENST00000545688 H2BFWTQ7Z2G1 175 aa1.44□□□□□ -2.18
SNHG1-224ENST00000545688 BPIFB6Q8NFQ5 453 aa1.44□□□□□ -2.18
SNHG1-224ENST00000545688 ZNF431Q8TF32 576 aaPredicted RBP1.44□□□□□ -2.18
SNHG1-224ENST00000545688 DNAJC30Q96LL9 226 aa1.44□□□□□ -2.18
SNHG1-224ENST00000545688 FAM19A4Q96LR4 140 aa1.44□□□□□ -2.18
SNHG1-224ENST00000545688 ODF3Q96PU9 254 aa1.44□□□□□ -2.18
SNHG1-224ENST00000545688 CHCHD7Q9BUK0 85 aa1.44□□□□□ -2.18
SNHG1-224ENST00000545688 PLAC8Q9NZF1 115 aa1.44□□□□□ -2.18
SNHG1-224ENST00000545688 KLF12Q9Y4X4 402 aa1.44□□□□□ -2.18
SNHG1-224ENST00000545688 MACF1Q9UPN3 7388 aaKnown RBP1.43□□□□□ -2.18
SNHG1-224ENST00000545688 A0A075B6Q4 140 aa1.43□□□□□ -2.18
SNHG1-224ENST00000545688 TRGV2A0A075B6R0 118 aa1.43□□□□□ -2.18
SNHG1-224ENST00000545688 TRGV1A0A0A0MS02 117 aa1.43□□□□□ -2.18
SNHG1-224ENST00000545688 TRAV8-3A0A0A6YYJ7 113 aa1.43□□□□□ -2.18
SNHG1-224ENST00000545688 LINC00854A0A1B0GVQ3 168 aa1.43□□□□□ -2.18
SNHG1-224ENST00000545688 C9JCJ5 164 aa1.43□□□□□ -2.18
SNHG1-224ENST00000545688 ORM1P02763 201 aa1.43□□□□□ -2.18
SNHG1-224ENST00000545688 LINC00694P0DN24 101 aa1.43□□□□□ -2.18
SNHG1-224ENST00000545688 HTN1P15515 57 aa1.43□□□□□ -2.18
SNHG1-224ENST00000545688 NTF3P20783 257 aa1.43□□□□□ -2.18
SNHG1-224ENST00000545688 SRIP30626 198 aa1.43□□□□□ -2.18
SNHG1-224ENST00000545688 TALDO1P37837 337 aa1.43□□□□□ -2.18
SNHG1-224ENST00000545688 RANBP1P43487 201 aa1.43□□□□□ -2.18
SNHG1-224ENST00000545688 GALR1P47211 349 aa1.43□□□□□ -2.18
SNHG1-224ENST00000545688 OR10A3P58181 314 aa1.43□□□□□ -2.18
SNHG1-224ENST00000545688 PRR3P79522 188 aaKnown RBP1.43□□□□□ -2.18
SNHG1-224ENST00000545688 HIST1H1AQ02539 215 aaPredicted RBP1.43□□□□□ -2.18
SNHG1-224ENST00000545688 SPINK9Q5DT21 86 aa1.43□□□□□ -2.18
SNHG1-224ENST00000545688 NMSQ5H8A3 153 aa1.43□□□□□ -2.18
SNHG1-224ENST00000545688 IBA57Q5T440 356 aaKnown RBP1.43□□□□□ -2.18
SNHG1-224ENST00000545688 SFXN4Q6P4A7 337 aa1.43□□□□□ -2.18
SNHG1-224ENST00000545688 OR8I2Q8N0Y5 310 aa1.43□□□□□ -2.18
SNHG1-224ENST00000545688 BORCS5Q969J3 196 aa1.43□□□□□ -2.18
SNHG1-224ENST00000545688 GPR82Q96P67 336 aa1.43□□□□□ -2.18
SNHG1-224ENST00000545688 TXNDC17Q9BRA2 123 aa1.43□□□□□ -2.18
SNHG1-224ENST00000545688 FXYD6Q9H0Q3 95 aa1.43□□□□□ -2.18
SNHG1-224ENST00000545688 FLGP20930 4061 aaPredicted RBP1.43□□□□□ -2.18
SNHG1-224ENST00000545688 TRAV8-1A0A0A6YYK1 113 aa1.42□□□□□ -2.18
SNHG1-224ENST00000545688 SNRPGP15A8MWD9 76 aa1.42□□□□□ -2.18
SNHG1-224ENST00000545688 H3BRN7 92 aa1.42□□□□□ -2.18
SNHG1-224ENST00000545688 GPR31O00270 319 aa1.42□□□□□ -2.18
SNHG1-224ENST00000545688 ARL6IP5O75915 188 aa1.42□□□□□ -2.18
SNHG1-224ENST00000545688 IGHV3-53P01767 116 aa1.42□□□□□ -2.18
SNHG1-224ENST00000545688 SFTA3P0C7M3 94 aa1.42□□□□□ -2.18
SNHG1-224ENST00000545688 GPX4P36969 197 aaPredicted RBP1.42□□□□□ -2.18
SNHG1-224ENST00000545688 TAS2R20P59543 309 aa1.42□□□□□ -2.18
SNHG1-224ENST00000545688 FXYD4P59646 89 aa1.42□□□□□ -2.18
SNHG1-224ENST00000545688 PLP1P60201 277 aa1.42□□□□□ -2.18
SNHG1-224ENST00000545688 SPCS3P61009 180 aa1.42□□□□□ -2.18
SNHG1-224ENST00000545688 RPL19P84098 196 aaKnown RBP1.42□□□□□ -2.18
SNHG1-224ENST00000545688 FABP5Q01469 135 aa1.42□□□□□ -2.18
SNHG1-224ENST00000545688 KRTAP19-2Q3LHN2 52 aa1.42□□□□□ -2.18
SNHG1-224ENST00000545688 DNAL1Q4LDG9 190 aa1.42□□□□□ -2.18
SNHG1-224ENST00000545688 KRTAP26-1Q6PEX3 210 aa1.42□□□□□ -2.18
SNHG1-224ENST00000545688 DPPA3Q6W0C5 159 aa1.42□□□□□ -2.18
SNHG1-224ENST00000545688 DAZ4Q86SG3 579 aaKnown RBP1.42□□□□□ -2.18
SNHG1-224ENST00000545688 EIF4E3Q8N5X7 224 aaKnown RBP1.42□□□□□ -2.18
SNHG1-224ENST00000545688 ATP6V0E2Q8NHE4 81 aa1.42□□□□□ -2.18
SNHG1-224ENST00000545688 SPACA4Q8TDM5 124 aa1.42□□□□□ -2.18
SNHG1-224ENST00000545688 TRGV9Q99603 122 aa1.42□□□□□ -2.18
SNHG1-224ENST00000545688 PARD6GQ9BYG4 376 aaPredicted RBP1.42□□□□□ -2.18
SNHG1-224ENST00000545688 AUNIPQ9H7T9 357 aa1.42□□□□□ -2.18
SNHG1-224ENST00000545688 PSORS1C2Q9UIG4 136 aa1.42□□□□□ -2.18
SNHG1-224ENST00000545688 R4GN34 69 aa1.42□□□□□ -2.18
SNHG1-224ENST00000545688 NEBP20929 6669 aa1.41□□□□□ -2.18
SNHG1-224ENST00000545688 A0A0A6YYH2 397 aa1.41□□□□□ -2.18
SNHG1-224ENST00000545688 TRAV8-6A0A0B4J262 113 aa1.41□□□□□ -2.18
SNHG1-224ENST00000545688 TRAV12-3A0A0B4J271 114 aa1.41□□□□□ -2.18
SNHG1-224ENST00000545688 C7orf71A4D174 169 aa1.41□□□□□ -2.18
SNHG1-224ENST00000545688 A6NJ64 397 aa1.41□□□□□ -2.18
SNHG1-224ENST00000545688 NDUFC2-KCTD14E9PQ53 114 aa1.41□□□□□ -2.18
SNHG1-224ENST00000545688 CASQ2O14958 399 aaPredicted RBP1.41□□□□□ -2.18
SNHG1-224ENST00000545688 CDS2O95674 445 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 909.6 ms