RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 IGHV4-4A0A075B6R2 117 aa10.15□□□□□ -0.78
HIF3A-215ENST00000533145 PLAC8L1A1L4L8 177 aa10.15□□□□□ -0.78
HIF3A-215ENST00000533145 PIK3CD-AS1Q5SR53 167 aa10.15□□□□□ -0.78
HIF3A-215ENST00000533145 KCNIP4Q6PIL6 250 aa10.15□□□□□ -0.78
HIF3A-215ENST00000533145 LYZL1Q6UWQ5 148 aa10.15□□□□□ -0.78
HIF3A-215ENST00000533145 IL17DQ8TAD2 202 aa10.15□□□□□ -0.78
HIF3A-215ENST00000533145 H3BVH4 76 aa10.14□□□□□ -0.79
HIF3A-215ENST00000533145 S100PP25815 95 aa10.14□□□□□ -0.79
HIF3A-215ENST00000533145 FAM3BP58499 235 aaPredicted RBP10.14□□□□□ -0.79
HIF3A-215ENST00000533145 DEFA6Q01524 100 aa10.14□□□□□ -0.79
HIF3A-215ENST00000533145 DAZ2Q13117 558 aaKnown RBP10.14□□□□□ -0.79
HIF3A-215ENST00000533145 B9D2Q9BPU9 175 aa10.14□□□□□ -0.79
HIF3A-215ENST00000533145 SPATA25Q9BR10 227 aa10.14□□□□□ -0.79
HIF3A-215ENST00000533145 GSN-AS1Q9NRJ2 163 aa10.14□□□□□ -0.79
HIF3A-215ENST00000533145 CACNG7P62955 275 aa10.13□□□□□ -0.79
HIF3A-215ENST00000533145 Q8NAQ8 132 aa10.13□□□□□ -0.79
HIF3A-215ENST00000533145 PGLYRP4Q96LB8 373 aa10.13□□□□□ -0.79
HIF3A-215ENST00000533145 YPEL4Q96NS1 127 aa10.13□□□□□ -0.79
HIF3A-215ENST00000533145 A0A1B0GUT8 65 aa10.12□□□□□ -0.79
HIF3A-215ENST00000533145 SNURFLB1AK76 121 aa10.12□□□□□ -0.79
HIF3A-215ENST00000533145 NXPH4O95158 308 aa10.12□□□□□ -0.79
HIF3A-215ENST00000533145 ELOBQ15370 118 aa10.12□□□□□ -0.79
HIF3A-215ENST00000533145 LGALS9BQ3B8N2 356 aa10.12□□□□□ -0.79
HIF3A-215ENST00000533145 ATP5L2Q7Z4Y8 100 aa10.12□□□□□ -0.79
HIF3A-215ENST00000533145 BTF3L4Q96K17 158 aa10.12□□□□□ -0.79
HIF3A-215ENST00000533145 NDUFAF3Q9BU61 184 aa10.12□□□□□ -0.79
HIF3A-215ENST00000533145 PHLDA3Q9Y5J5 127 aa10.12□□□□□ -0.79
HIF3A-215ENST00000533145 TIMM8BQ9Y5J9 83 aaPredicted RBP10.12□□□□□ -0.79
HIF3A-215ENST00000533145 TRBV24-1A0A075B6N3 115 aa10.11□□□□□ -0.79
HIF3A-215ENST00000533145 M0R2P5 195 aa10.11□□□□□ -0.79
HIF3A-215ENST00000533145 SPINK4O60575 86 aa10.11□□□□□ -0.79
HIF3A-215ENST00000533145 NTF3P20783 257 aa10.11□□□□□ -0.79
HIF3A-215ENST00000533145 TMEM88Q6PEY1 159 aa10.11□□□□□ -0.79
HIF3A-215ENST00000533145 CBLN2Q8IUK8 224 aa10.11□□□□□ -0.79
HIF3A-215ENST00000533145 BORCS7Q96B45 105 aa10.11□□□□□ -0.79
HIF3A-215ENST00000533145 URGCP-MRPS24S4R325 110 aa10.11□□□□□ -0.79
HIF3A-215ENST00000533145 IGHV4-28A0A0C4DH34 117 aa10.1□□□□□ -0.79
HIF3A-215ENST00000533145 A0A1B0GW15 77 aa10.1□□□□□ -0.79
HIF3A-215ENST00000533145 SCO1O75880 301 aa10.1□□□□□ -0.79
HIF3A-215ENST00000533145 RIGQ13278 110 aa10.1□□□□□ -0.79
HIF3A-215ENST00000533145 DMRTA1Q5VZB9 504 aa10.1□□□□□ -0.79
HIF3A-215ENST00000533145 RASL11AQ6T310 242 aa10.1□□□□□ -0.79
HIF3A-215ENST00000533145 ZFP82Q8N141 532 aa10.1□□□□□ -0.79
HIF3A-215ENST00000533145 OR10AG1Q8NH19 301 aa10.1□□□□□ -0.79
HIF3A-215ENST00000533145 RASL10AQ92737 203 aa10.1□□□□□ -0.79
HIF3A-215ENST00000533145 TPPP3Q9BW30 176 aa10.1□□□□□ -0.79
HIF3A-215ENST00000533145 ZMAT4Q9H898 229 aa10.1□□□□□ -0.79
HIF3A-215ENST00000533145 RETNQ9HD89 108 aa10.1□□□□□ -0.79
HIF3A-215ENST00000533145 A0A1B0GXF2 115 aa10.09□□□□□ -0.79
HIF3A-215ENST00000533145 NHLRC4P0CG21 123 aaPredicted RBP10.09□□□□□ -0.79
HIF3A-215ENST00000533145 SPANXN1Q5VSR9 72 aa10.09□□□□□ -0.79
HIF3A-215ENST00000533145 LINC00612Q8N6U2 182 aa10.09□□□□□ -0.79
HIF3A-215ENST00000533145 SYT8Q8NBV8 401 aa10.09□□□□□ -0.79
HIF3A-215ENST00000533145 C11orf68Q9H3H3 251 aaKnown RBP10.09□□□□□ -0.79
HIF3A-215ENST00000533145 LYRM9A8MSI8 78 aa10.08□□□□□ -0.8
HIF3A-215ENST00000533145 ZNF876PQ49A33 203 aa10.08□□□□□ -0.8
HIF3A-215ENST00000533145 COX19Q49B96 90 aa10.08□□□□□ -0.8
HIF3A-215ENST00000533145 GATD1Q8NB37 220 aa10.08□□□□□ -0.8
HIF3A-215ENST00000533145 NOP10Q9NPE3 64 aaKnown RBP10.08□□□□□ -0.8
HIF3A-215ENST00000533145 MUC21A0A0G2JKD1 596 aa10.07□□□□□ -0.8
HIF3A-215ENST00000533145 MUC21A0A140T8X8 626 aa10.07□□□□□ -0.8
HIF3A-215ENST00000533145 COLCA2A8K830 154 aa10.07□□□□□ -0.8
HIF3A-215ENST00000533145 M0R381 172 aa10.07□□□□□ -0.8
HIF3A-215ENST00000533145 S100A8P05109 93 aa10.07□□□□□ -0.8
HIF3A-215ENST00000533145 HBBP68871 147 aa10.07□□□□□ -0.8
HIF3A-215ENST00000533145 TWIST1Q15672 202 aa10.07□□□□□ -0.8
HIF3A-215ENST00000533145 C18orf15Q96N68 181 aa10.07□□□□□ -0.8
HIF3A-215ENST00000533145 MSRB1Q9NZV6 116 aa10.07□□□□□ -0.8
HIF3A-215ENST00000533145 DKK2Q9UBU2 259 aa10.07□□□□□ -0.8
HIF3A-215ENST00000533145 NACAE9PAV3 2078 aa10.06□□□□□ -0.8
HIF3A-215ENST00000533145 TGIF2-C20orf24A0A0A6YYL0 155 aa10.06□□□□□ -0.8
HIF3A-215ENST00000533145 TEX48A0A1B0GUV7 120 aa10.06□□□□□ -0.8
HIF3A-215ENST00000533145 TRGC1P0CF51 173 aa10.06□□□□□ -0.8
HIF3A-215ENST00000533145 MRPL54Q6P161 138 aaKnown RBP10.06□□□□□ -0.8
HIF3A-215ENST00000533145 FAM210BQ96KR6 192 aa10.06□□□□□ -0.8
HIF3A-215ENST00000533145 TMEM191AQ9H0A3 160 aa10.06□□□□□ -0.8
HIF3A-215ENST00000533145 NBEAL2Q6ZNJ1 2754 aa10.06□□□□□ -0.8
HIF3A-215ENST00000533145 A8MWV9 139 aa10.05□□□□□ -0.8
HIF3A-215ENST00000533145 Q6ZTI0 123 aa10.05□□□□□ -0.8
HIF3A-215ENST00000533145 GNB1LQ9BYB4 327 aa10.05□□□□□ -0.8
HIF3A-215ENST00000533145 MRPL16Q9NX20 251 aaKnown RBP10.05□□□□□ -0.8
HIF3A-215ENST00000533145 TRGV1A0A0A0MS02 117 aa10.04□□□□□ -0.8
HIF3A-215ENST00000533145 RS1O15537 224 aa10.04□□□□□ -0.8
HIF3A-215ENST00000533145 CIDEAO60543 219 aa10.04□□□□□ -0.8
HIF3A-215ENST00000533145 SPART-AS1P0CW21 52 aa10.04□□□□□ -0.8
HIF3A-215ENST00000533145 EMP1P54849 157 aa10.04□□□□□ -0.8
HIF3A-215ENST00000533145 SSTP61278 116 aa10.04□□□□□ -0.8
HIF3A-215ENST00000533145 FAM222AQ5U5X8 452 aa10.04□□□□□ -0.8
HIF3A-215ENST00000533145 AP1S3Q96PC3 154 aa10.04□□□□□ -0.8
HIF3A-215ENST00000533145 KIF25-AS1Q9Y6Z4 181 aa10.04□□□□□ -0.8
HIF3A-215ENST00000533145 DEFB4AO15263 64 aa10.03□□□□□ -0.8
HIF3A-215ENST00000533145 CRYGDP07320 174 aa10.03□□□□□ -0.8
HIF3A-215ENST00000533145 CAMPP49913 170 aa10.03□□□□□ -0.8
HIF3A-215ENST00000533145 TMEM136Q6ZRR5 245 aa10.03□□□□□ -0.8
HIF3A-215ENST00000533145 SMIM15Q7Z3B0 74 aa10.03□□□□□ -0.8
HIF3A-215ENST00000533145 POM121L12Q8N7R1 296 aa10.03□□□□□ -0.8
HIF3A-215ENST00000533145 JPT2Q9H910 190 aa10.03□□□□□ -0.8
HIF3A-215ENST00000533145 TRAV4A0A0B4J268 109 aa10.02□□□□□ -0.81
HIF3A-215ENST00000533145 HLA-DQA1P01909 254 aa10.02□□□□□ -0.81
HIF3A-215ENST00000533145 MT-ND6P03923 174 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms