RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-208ENST00000520580 RRAS2P62070 204 aaPredicted RBP1.8□□□□□ -2.12
SREK1-208ENST00000520580 RPS25P62851 125 aaKnown RBP1.8□□□□□ -2.12
SREK1-208ENST00000520580 ARL17AQ8IVW1 177 aa1.8□□□□□ -2.12
SREK1-208ENST00000520580 TMEM254Q8TBM7 123 aa1.8□□□□□ -2.12
SREK1-208ENST00000520580 SFT2D1Q8WV19 159 aa1.8□□□□□ -2.12
SREK1-208ENST00000520580 BRWD1Q9NSI6 2320 aa1.8□□□□□ -2.12
SREK1-208ENST00000520580 HEATR1Q9H583 2144 aaKnown RBP1.8□□□□□ -2.12
SREK1-208ENST00000520580 DMXL1Q9Y485 3027 aa1.8□□□□□ -2.12
SREK1-208ENST00000520580 KIAA1549Q9HCM3 1950 aa1.8□□□□□ -2.12
SREK1-208ENST00000520580 FAM236AA0A1B0GUQ0 79 aa1.8□□□□□ -2.12
SREK1-208ENST00000520580 FAM236BA0A1B0GV22 79 aa1.8□□□□□ -2.12
SREK1-208ENST00000520580 ZNF727A8MUV8 499 aa1.8□□□□□ -2.12
SREK1-208ENST00000520580 C5orf67F2Z3F1 127 aa1.8□□□□□ -2.12
SREK1-208ENST00000520580 C17orf112F2Z3M2 114 aa1.8□□□□□ -2.12
SREK1-208ENST00000520580 K7EP13 123 aa1.8□□□□□ -2.12
SREK1-208ENST00000520580 SMIM24O75264 130 aa1.8□□□□□ -2.12
SREK1-208ENST00000520580 SLC25A4P12235 298 aa1.8□□□□□ -2.12
SREK1-208ENST00000520580 MIFP14174 115 aa1.8□□□□□ -2.12
SREK1-208ENST00000520580 NCS1P62166 190 aa1.8□□□□□ -2.12
SREK1-208ENST00000520580 ELOBQ15370 118 aa1.8□□□□□ -2.12
SREK1-208ENST00000520580 COMMD3Q9UBI1 195 aa1.8□□□□□ -2.12
SREK1-208ENST00000520580 ERG28Q9UKR5 140 aa1.8□□□□□ -2.12
SREK1-208ENST00000520580 COL4A5P29400 1685 aa1.8□□□□□ -2.12
SREK1-208ENST00000520580 UBR3Q6ZT12 1888 aa1.8□□□□□ -2.12
SREK1-208ENST00000520580 FBN3Q75N90 2809 aa1.8□□□□□ -2.12
SREK1-208ENST00000520580 TCRBV4S1A1TA0A5B7 111 aa1.79□□□□□ -2.12
SREK1-208ENST00000520580 LINC00587B1AMM8 73 aa1.79□□□□□ -2.12
SREK1-208ENST00000520580 LYPD1Q8N2G4 141 aa1.79□□□□□ -2.12
SREK1-208ENST00000520580 CNOT1A5YKK6 2376 aaKnown RBP1.79□□□□□ -2.12
SREK1-208ENST00000520580 CFAP46Q8IYW2 2715 aa1.79□□□□□ -2.12
SREK1-208ENST00000520580 FRYQ5TBA9 3013 aa1.79□□□□□ -2.12
SREK1-208ENST00000520580 GVINP1Q7Z2Y8 2422 aa1.79□□□□□ -2.12
SREK1-208ENST00000520580 MGAMO43451 1857 aa1.79□□□□□ -2.12
SREK1-208ENST00000520580 PCDH15Q96QU1 1955 aa1.79□□□□□ -2.12
SREK1-208ENST00000520580 FANCMQ8IYD8 2048 aa1.79□□□□□ -2.12
SREK1-208ENST00000520580 SCN3AQ9NY46 2000 aa1.79□□□□□ -2.12
SREK1-208ENST00000520580 TRAV14DV4A0A0A6YYC5 116 aa1.79□□□□□ -2.12
SREK1-208ENST00000520580 hDV103S1A0JD37 113 aa1.79□□□□□ -2.12
SREK1-208ENST00000520580 C9orf170A2RU37 121 aa1.79□□□□□ -2.12
SREK1-208ENST00000520580 UQCRQO14949 82 aa1.79□□□□□ -2.12
SREK1-208ENST00000520580 LYRM1O43325 122 aa1.79□□□□□ -2.12
SREK1-208ENST00000520580 SULT1C4O75897 302 aa1.79□□□□□ -2.12
SREK1-208ENST00000520580 HBDP02042 147 aa1.79□□□□□ -2.12
SREK1-208ENST00000520580 COPZ1P61923 177 aa1.79□□□□□ -2.12
SREK1-208ENST00000520580 Q1T7F1 81 aa1.79□□□□□ -2.12
SREK1-208ENST00000520580 FP248Q71RG6 208 aaPredicted RBP1.79□□□□□ -2.12
SREK1-208ENST00000520580 OR4S1Q8NGB4 309 aa1.79□□□□□ -2.12
SREK1-208ENST00000520580 MYO9AB2RTY4 2548 aa1.79□□□□□ -2.12
SREK1-208ENST00000520580 WNK3Q9BYP7 1800 aa1.79□□□□□ -2.12
SREK1-208ENST00000520580 TEX15Q9BXT5 2789 aa1.78□□□□□ -2.12
SREK1-208ENST00000520580 PCBD1P61457 104 aa1.78□□□□□ -2.12
SREK1-208ENST00000520580 BLCAPP62952 87 aa1.78□□□□□ -2.12
SREK1-208ENST00000520580 OR4C6Q8NH72 309 aa1.78□□□□□ -2.12
SREK1-208ENST00000520580 Q96M85 177 aa1.78□□□□□ -2.12
SREK1-208ENST00000520580 NABP2Q9BQ15 211 aa1.78□□□□□ -2.12
SREK1-208ENST00000520580 CST11Q9H112 138 aa1.78□□□□□ -2.12
SREK1-208ENST00000520580 CEP162Q5TB80 1403 aa1.78□□□□□ -2.12
SREK1-208ENST00000520580 COL4A2P08572 1712 aa1.78□□□□□ -2.12
SREK1-208ENST00000520580 EP300Q09472 2414 aaPredicted RBP1.78□□□□□ -2.12
SREK1-208ENST00000520580 SMG1Q96Q15 3661 aaKnown RBP1.78□□□□□ -2.12
SREK1-208ENST00000520580 BRS3P32247 399 aa1.78□□□□□ -2.12
SREK1-208ENST00000520580 CIRBPQ14011 172 aaKnown RBP1.78□□□□□ -2.12
SREK1-208ENST00000520580 CLLU1Q5K131 121 aa1.78□□□□□ -2.12
SREK1-208ENST00000520580 MMGT1Q8N4V1 131 aa1.78□□□□□ -2.12
SREK1-208ENST00000520580 MUCL1Q96DR8 90 aa1.78□□□□□ -2.12
SREK1-208ENST00000520580 VPS13AQ96RL7 3174 aa1.78□□□□□ -2.13
SREK1-208ENST00000520580 ZZEF1O43149 2961 aa1.78□□□□□ -2.13
SREK1-208ENST00000520580 CACNA1HO95180 2353 aa1.78□□□□□ -2.13
SREK1-208ENST00000520580 DOT1LQ8TEK3 1739 aa1.77□□□□□ -2.13
SREK1-208ENST00000520580 SPTAN1Q13813 2472 aaKnown RBP1.77□□□□□ -2.13
SREK1-208ENST00000520580 ANKARQ7Z5J8 1434 aa1.77□□□□□ -2.13
SREK1-208ENST00000520580 TRAV12-1A0A0B4J245 112 aa1.77□□□□□ -2.13
SREK1-208ENST00000520580 NPFFO15130 113 aa1.77□□□□□ -2.13
SREK1-208ENST00000520580 CD14P08571 375 aa1.77□□□□□ -2.13
SREK1-208ENST00000520580 HAGHLQ6PII5 290 aaPredicted RBP1.77□□□□□ -2.13
SREK1-208ENST00000520580 TMEM91Q6ZNR0 172 aa1.77□□□□□ -2.13
SREK1-208ENST00000520580 LCE3DQ9BYE3 92 aa1.77□□□□□ -2.13
SREK1-208ENST00000520580 NOTCH2Q04721 2471 aa1.77□□□□□ -2.13
SREK1-208ENST00000520580 C2CD3Q4AC94 2353 aa1.77□□□□□ -2.13
SREK1-208ENST00000520580 E9PCH4 1651 aa1.77□□□□□ -2.13
SREK1-208ENST00000520580 IQGAP3Q86VI3 1631 aa1.77□□□□□ -2.13
SREK1-208ENST00000520580 UBR5O95071 2799 aaPredicted RBP1.77□□□□□ -2.13
SREK1-208ENST00000520580 COL1A1P02452 1464 aaPredicted RBP1.77□□□□□ -2.13
SREK1-208ENST00000520580 NBEAQ8NFP9 2946 aa1.77□□□□□ -2.13
SREK1-208ENST00000520580 COL11A1P12107 1806 aaPredicted RBP1.77□□□□□ -2.13
SREK1-208ENST00000520580 C3orf85A0A1B0GTC6 90 aa1.77□□□□□ -2.13
SREK1-208ENST00000520580 HLA-DRB4P13762 266 aa1.77□□□□□ -2.13
SREK1-208ENST00000520580 HIST1H1BP16401 226 aaKnown RBP1.77□□□□□ -2.13
SREK1-208ENST00000520580 ZNF93P35789 620 aaPredicted RBP1.77□□□□□ -2.13
SREK1-208ENST00000520580 CCL4L1Q8NHW4 92 aa1.77□□□□□ -2.13
SREK1-208ENST00000520580 ARL11Q969Q4 196 aa1.77□□□□□ -2.13
SREK1-208ENST00000520580 DNAJC15Q9Y5T4 150 aa1.77□□□□□ -2.13
SREK1-208ENST00000520580 HLA-DRB4X5D2U9 266 aa1.77□□□□□ -2.13
SREK1-208ENST00000520580 IFT172Q9UG01 1749 aa1.77□□□□□ -2.13
SREK1-208ENST00000520580 ALPK3Q96L96 1907 aa1.76□□□□□ -2.13
SREK1-208ENST00000520580 SMG6Q86US8 1419 aaKnown RBP1.76□□□□□ -2.13
SREK1-208ENST00000520580 RGPD5Q99666 1765 aa1.76□□□□□ -2.13
SREK1-208ENST00000520580 TRAV10A0A0B4J240 114 aa1.76□□□□□ -2.13
SREK1-208ENST00000520580 LOC107986453A0A1B0GWG9 222 aa1.76□□□□□ -2.13
SREK1-208ENST00000520580 FAM25AB3EWG3 89 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms