RNA–Protein interactions for RNA: ENST00000513228.1

SMN1-208, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 2

Gene SMN1, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-208ENST00000513228 KDM6BO15054 1643 aa0.08□□□□□ -2.4
SMN1-208ENST00000513228 SYNE1Q8NF91 8797 aaKnown RBP0.08□□□□□ -2.4
SMN1-208ENST00000513228 ESPL1Q14674 2120 aa0.08□□□□□ -2.4
SMN1-208ENST00000513228 PTPRMP28827 1452 aa0.08□□□□□ -2.4
SMN1-208ENST00000513228 IGSF10Q6WRI0 2623 aa0.07□□□□□ -2.4
SMN1-208ENST00000513228 IGF2RP11717 2491 aa0.07□□□□□ -2.4
SMN1-208ENST00000513228 CMPK1P30085 196 aa0.07□□□□□ -2.4
SMN1-208ENST00000513228 SPINK6Q6UWN8 80 aa0.07□□□□□ -2.4
SMN1-208ENST00000513228 TCTE3Q8IZS6 198 aa0.07□□□□□ -2.4
SMN1-208ENST00000513228 ANKRD30AQ9BXX3 1397 aa0.06□□□□□ -2.4
SMN1-208ENST00000513228 SYNJ1O43426 1573 aa0.06□□□□□ -2.4
SMN1-208ENST00000513228 PYYP10082 97 aa0.06□□□□□ -2.4
SMN1-208ENST00000513228 SNX29P2Q8IUI4 249 aa0.06□□□□□ -2.4
SMN1-208ENST00000513228 PPDPFLQ8WWR9 84 aa0.06□□□□□ -2.4
SMN1-208ENST00000513228 SPRR2GQ9BYE4 73 aa0.06□□□□□ -2.4
SMN1-208ENST00000513228 PROK2Q9HC23 129 aa0.06□□□□□ -2.4
SMN1-208ENST00000513228 TAS2R8Q9NYW2 309 aa0.06□□□□□ -2.4
SMN1-208ENST00000513228 LSM2Q9Y333 95 aaKnown RBP0.06□□□□□ -2.4
SMN1-208ENST00000513228 CCDC171Q6TFL3 1326 aa0.06□□□□□ -2.4
SMN1-208ENST00000513228 ZNF142P52746 1687 aaPredicted RBP0.05□□□□□ -2.4
SMN1-208ENST00000513228 UHRF1BP1LA0JNW5 1464 aa0.05□□□□□ -2.4
SMN1-208ENST00000513228 LRP1Q07954 4544 aaKnown RBP0.05□□□□□ -2.4
SMN1-208ENST00000513228 TEX49A0A1B0GTD5 131 aa0.05□□□□□ -2.4
SMN1-208ENST00000513228 SMIM24O75264 130 aa0.05□□□□□ -2.4
SMN1-208ENST00000513228 SLC25A6P12236 298 aa0.05□□□□□ -2.4
SMN1-208ENST00000513228 ELOF1P60002 83 aaKnown RBP0.05□□□□□ -2.4
SMN1-208ENST00000513228 EMX2Q04743 252 aa0.05□□□□□ -2.4
SMN1-208ENST00000513228 CCDC153Q494R4 210 aa0.05□□□□□ -2.4
SMN1-208ENST00000513228 MORN2Q502X0 79 aa0.05□□□□□ -2.4
SMN1-208ENST00000513228 CLLU1Q5K131 121 aa0.05□□□□□ -2.4
SMN1-208ENST00000513228 OR2T2Q6IF00 324 aa0.05□□□□□ -2.4
SMN1-208ENST00000513228 DSCR8Q96T75 97 aa0.05□□□□□ -2.4
SMN1-208ENST00000513228 NOP16Q9Y3C1 178 aaKnown RBP0.05□□□□□ -2.4
SMN1-208ENST00000513228 TNS1Q9HBL0 1735 aaKnown RBP0.04□□□□□ -2.4
SMN1-208ENST00000513228 ZFYVE26Q68DK2 2539 aa0.04□□□□□ -2.4
SMN1-208ENST00000513228 A0A087WTM6 91 aa0.04□□□□□ -2.4
SMN1-208ENST00000513228 BORCS7-ASMTA0A0B4J1R7 106 aa0.04□□□□□ -2.4
SMN1-208ENST00000513228 TRAV2A0A0B4J234 112 aa0.04□□□□□ -2.4
SMN1-208ENST00000513228 NPC2P61916 151 aa0.04□□□□□ -2.4
SMN1-208ENST00000513228 DR1Q01658 176 aa0.04□□□□□ -2.4
SMN1-208ENST00000513228 VMO1Q7Z5L0 202 aa0.04□□□□□ -2.4
SMN1-208ENST00000513228 AKAP14Q86UN6 197 aa0.04□□□□□ -2.4
SMN1-208ENST00000513228 ATP6V0E2Q8NHE4 81 aa0.04□□□□□ -2.4
SMN1-208ENST00000513228 DYNLRB2Q8TF09 96 aa0.04□□□□□ -2.4
SMN1-208ENST00000513228 IFI27L1Q96BM0 104 aa0.04□□□□□ -2.4
SMN1-208ENST00000513228 TMEM141Q96I45 108 aa0.04□□□□□ -2.4
SMN1-208ENST00000513228 ERCC6Q03468 1493 aa0.03□□□□□ -2.4
SMN1-208ENST00000513228 ABCA1O95477 2261 aa0.03□□□□□ -2.4
SMN1-208ENST00000513228 TRAV12-2A0A075B6T6 113 aa0.03□□□□□ -2.4
SMN1-208ENST00000513228 ZNF670-ZNF695F2Z2N8 137 aa0.03□□□□□ -2.4
SMN1-208ENST00000513228 J3QLW9 94 aa0.03□□□□□ -2.4
SMN1-208ENST00000513228 M0R2P5 195 aa0.03□□□□□ -2.4
SMN1-208ENST00000513228 RBP4P02753 201 aa0.03□□□□□ -2.4
SMN1-208ENST00000513228 DBIP07108 87 aaKnown RBP0.03□□□□□ -2.4
SMN1-208ENST00000513228 SCGB1A1P11684 91 aa0.03□□□□□ -2.4
SMN1-208ENST00000513228 ATP11AUNQ6ZP68 121 aa0.03□□□□□ -2.4
SMN1-208ENST00000513228 MAGOHBQ96A72 148 aaKnown RBP0.03□□□□□ -2.4
SMN1-208ENST00000513228 BET1LQ9NYM9 111 aa0.03□□□□□ -2.4
SMN1-208ENST00000513228 ABCA4P78363 2273 aa0.03□□□□□ -2.4
SMN1-208ENST00000513228 VIRMAQ69YN4 1812 aaKnown RBP0.03□□□□□ -2.4
SMN1-208ENST00000513228 KIF13AQ9H1H9 1805 aa0.03□□□□□ -2.4
SMN1-208ENST00000513228 SSPOA2VEC9 5147 aa0.03□□□□□ -2.41
SMN1-208ENST00000513228 MACF1Q9UPN3 7388 aaKnown RBP0.02□□□□□ -2.41
SMN1-208ENST00000513228 GVQW2A0A096LPI5 108 aaPredicted RBP0.02□□□□□ -2.41
SMN1-208ENST00000513228 FAM236AA0A1B0GUQ0 79 aa0.02□□□□□ -2.41
SMN1-208ENST00000513228 FAM236BA0A1B0GV22 79 aa0.02□□□□□ -2.41
SMN1-208ENST00000513228 TCRBV3S1A0A5B6 114 aa0.02□□□□□ -2.41
SMN1-208ENST00000513228 M0R129 80 aa0.02□□□□□ -2.41
SMN1-208ENST00000513228 APOC1P02654 83 aa0.02□□□□□ -2.41
SMN1-208ENST00000513228 PYDC1Q8WXC3 89 aa0.02□□□□□ -2.41
SMN1-208ENST00000513228 AIF1LQ9BQI0 150 aa0.02□□□□□ -2.41
SMN1-208ENST00000513228 VPS25Q9BRG1 176 aa0.02□□□□□ -2.41
SMN1-208ENST00000513228 SPANXA1Q9NS26 97 aa0.02□□□□□ -2.41
SMN1-208ENST00000513228 SPANXCQ9NY87 97 aa0.02□□□□□ -2.41
SMN1-208ENST00000513228 COA4Q9NYJ1 87 aa0.02□□□□□ -2.41
SMN1-208ENST00000513228 SOGA1O94964 1423 aa0.02□□□□□ -2.41
SMN1-208ENST00000513228 SSC5DA1L4H1 1573 aa0.02□□□□□ -2.41
SMN1-208ENST00000513228 COL7A1Q02388 2944 aa0.01□□□□□ -2.41
SMN1-208ENST00000513228 SPAG17Q6Q759 2223 aa0.01□□□□□ -2.41
SMN1-208ENST00000513228 TRBV20-1A0A075B6N2 111 aa0.01□□□□□ -2.41
SMN1-208ENST00000513228 ARPC5O15511 151 aa0.01□□□□□ -2.41
SMN1-208ENST00000513228 YPEL1O60688 119 aa0.01□□□□□ -2.41
SMN1-208ENST00000513228 IGLC6P0CF74 106 aa0.01□□□□□ -2.41
SMN1-208ENST00000513228 CCL3L1P16619 93 aa0.01□□□□□ -2.41
SMN1-208ENST00000513228 HIST1H1AQ02539 215 aaPredicted RBP0.01□□□□□ -2.41
SMN1-208ENST00000513228 CYP2G1PQ6ZSU1 146 aa0.01□□□□□ -2.41
SMN1-208ENST00000513228 NDUFA11Q86Y39 141 aa0.01□□□□□ -2.41
SMN1-208ENST00000513228 BDP1A6H8Y1 2624 aa0.01□□□□□ -2.41
SMN1-208ENST00000513228 ARHGEF10O15013 1369 aa0.01□□□□□ -2.41
SMN1-208ENST00000513228 CDK13Q14004 1512 aaKnown RBP0.01□□□□□ -2.41
SMN1-208ENST00000513228 MUC22E2RYF6 1773 aaPredicted RBP0.01□□□□□ -2.41
SMN1-208ENST00000513228 PLXNA1Q9UIW2 1896 aa0.01□□□□□ -2.41
SMN1-208ENST00000513228 OVOS2A0A0J9YW53 1432 aa0□□□□□ -2.41
SMN1-208ENST00000513228 MCRIP1C9JLW8 97 aa0□□□□□ -2.41
SMN1-208ENST00000513228 F2Z2F3 143 aa0□□□□□ -2.41
SMN1-208ENST00000513228 CCDC179H3BU77 68 aa0□□□□□ -2.41
SMN1-208ENST00000513228 PITX3O75364 302 aa0□□□□□ -2.41
SMN1-208ENST00000513228 LINC01545Q5VT33 79 aa0□□□□□ -2.41
SMN1-208ENST00000513228 MIC13Q5XKP0 118 aa0□□□□□ -2.41
SMN1-208ENST00000513228 OVOS2Q6IE36 1432 aa0□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms