RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 MEGF8Q7Z7M0 2845 aa8.24□□□□□ -1.09
MCF2L-231ENST00000494043 SMIM9A6NGZ8 99 aa8.23□□□□□ -1.09
MCF2L-231ENST00000494043 F2Z2F3 143 aa8.23□□□□□ -1.09
MCF2L-231ENST00000494043 SPRY2O43597 315 aa8.23□□□□□ -1.09
MCF2L-231ENST00000494043 ZNF493Q6ZR52 646 aa8.23□□□□□ -1.09
MCF2L-231ENST00000494043 C16orf74Q96GX8 76 aa8.23□□□□□ -1.09
MCF2L-231ENST00000494043 BTF3L4Q96K17 158 aa8.23□□□□□ -1.09
MCF2L-231ENST00000494043 CNFNQ9BYD5 112 aa8.23□□□□□ -1.09
MCF2L-231ENST00000494043 TP53TG1Q9Y2A0 90 aa8.23□□□□□ -1.09
MCF2L-231ENST00000494043 TRBV24-1A0A075B6N3 115 aa8.22□□□□□ -1.09
MCF2L-231ENST00000494043 TGIF2-C20orf24A0A0A6YYL0 155 aa8.22□□□□□ -1.09
MCF2L-231ENST00000494043 MUC21A0A0G2JKD1 596 aa8.22□□□□□ -1.09
MCF2L-231ENST00000494043 MUC21A0A140T8X8 626 aa8.22□□□□□ -1.09
MCF2L-231ENST00000494043 A0A1B0GUT8 65 aa8.22□□□□□ -1.09
MCF2L-231ENST00000494043 SPINK4O60575 86 aa8.22□□□□□ -1.09
MCF2L-231ENST00000494043 WDR73Q6P4I2 378 aa8.22□□□□□ -1.09
MCF2L-231ENST00000494043 ATP5L2Q7Z4Y8 100 aa8.22□□□□□ -1.09
MCF2L-231ENST00000494043 OR11H2Q8NH07 326 aa8.22□□□□□ -1.09
MCF2L-231ENST00000494043 OR10AG1Q8NH19 301 aa8.22□□□□□ -1.09
MCF2L-231ENST00000494043 IL17DQ8TAD2 202 aa8.22□□□□□ -1.09
MCF2L-231ENST00000494043 MRAPQ8TCY5 172 aa8.22□□□□□ -1.09
MCF2L-231ENST00000494043 BORCS7Q96B45 105 aa8.22□□□□□ -1.09
MCF2L-231ENST00000494043 OVOL2Q9BRP0 275 aa8.22□□□□□ -1.09
MCF2L-231ENST00000494043 GSN-AS1Q9NRJ2 163 aa8.22□□□□□ -1.09
MCF2L-231ENST00000494043 PHLDA3Q9Y5J5 127 aa8.22□□□□□ -1.09
MCF2L-231ENST00000494043 IGHV4-4A0A075B6R2 117 aa8.21□□□□□ -1.1
MCF2L-231ENST00000494043 A0A1B0GXF2 115 aa8.21□□□□□ -1.1
MCF2L-231ENST00000494043 PLAC8L1A1L4L8 177 aa8.21□□□□□ -1.1
MCF2L-231ENST00000494043 NXPH4O95158 308 aa8.21□□□□□ -1.1
MCF2L-231ENST00000494043 CACNG7P62955 275 aa8.21□□□□□ -1.1
MCF2L-231ENST00000494043 RIGQ13278 110 aa8.21□□□□□ -1.1
MCF2L-231ENST00000494043 SPANXN1Q5VSR9 72 aa8.21□□□□□ -1.1
MCF2L-231ENST00000494043 MRPL54Q6P161 138 aaKnown RBP8.21□□□□□ -1.1
MCF2L-231ENST00000494043 SBSPONQ8IVN8 264 aa8.21□□□□□ -1.1
MCF2L-231ENST00000494043 SPXQ9BT56 116 aa8.21□□□□□ -1.1
MCF2L-231ENST00000494043 RETNQ9HD89 108 aa8.21□□□□□ -1.1
MCF2L-231ENST00000494043 COLCA2A8K830 154 aa8.2□□□□□ -1.1
MCF2L-231ENST00000494043 SNURFLB1AK76 121 aa8.2□□□□□ -1.1
MCF2L-231ENST00000494043 MIFP14174 115 aa8.2□□□□□ -1.1
MCF2L-231ENST00000494043 HBBP68871 147 aa8.2□□□□□ -1.1
MCF2L-231ENST00000494043 ZFP82Q8N141 532 aa8.2□□□□□ -1.1
MCF2L-231ENST00000494043 FAM210BQ96KR6 192 aa8.2□□□□□ -1.1
MCF2L-231ENST00000494043 IGHV4-28A0A0C4DH34 117 aa8.19□□□□□ -1.1
MCF2L-231ENST00000494043 A0A1B0GW15 77 aa8.19□□□□□ -1.1
MCF2L-231ENST00000494043 M0R2P5 195 aa8.19□□□□□ -1.1
MCF2L-231ENST00000494043 M0R381 172 aa8.19□□□□□ -1.1
MCF2L-231ENST00000494043 NTF3P20783 257 aa8.19□□□□□ -1.1
MCF2L-231ENST00000494043 SSTP61278 116 aa8.19□□□□□ -1.1
MCF2L-231ENST00000494043 DAZ2Q13117 558 aaKnown RBP8.19□□□□□ -1.1
MCF2L-231ENST00000494043 TWIST1Q15672 202 aa8.19□□□□□ -1.1
MCF2L-231ENST00000494043 RASL11AQ6T310 242 aa8.19□□□□□ -1.1
MCF2L-231ENST00000494043 Q8NAQ8 132 aa8.19□□□□□ -1.1
MCF2L-231ENST00000494043 SYT8Q8NBV8 401 aa8.19□□□□□ -1.1
MCF2L-231ENST00000494043 PTH2Q96A98 100 aa8.19□□□□□ -1.1
MCF2L-231ENST00000494043 SPATA25Q9BR10 227 aa8.19□□□□□ -1.1
MCF2L-231ENST00000494043 TM2D3Q9BRN9 247 aa8.19□□□□□ -1.1
MCF2L-231ENST00000494043 S100A8P05109 93 aa8.18□□□□□ -1.1
MCF2L-231ENST00000494043 CAMPP49913 170 aa8.18□□□□□ -1.1
MCF2L-231ENST00000494043 PIK3CD-AS1Q5SR53 167 aa8.18□□□□□ -1.1
MCF2L-231ENST00000494043 NOP10Q9NPE3 64 aaKnown RBP8.18□□□□□ -1.1
MCF2L-231ENST00000494043 MRPL16Q9NX20 251 aaKnown RBP8.18□□□□□ -1.1
MCF2L-231ENST00000494043 MSRB1Q9NZV6 116 aa8.18□□□□□ -1.1
MCF2L-231ENST00000494043 EMP1P54849 157 aa8.17□□□□□ -1.1
MCF2L-231ENST00000494043 DEFA6Q01524 100 aa8.17□□□□□ -1.1
MCF2L-231ENST00000494043 LGALS9BQ3B8N2 356 aa8.17□□□□□ -1.1
MCF2L-231ENST00000494043 ZNF876PQ49A33 203 aa8.17□□□□□ -1.1
MCF2L-231ENST00000494043 COX19Q49B96 90 aa8.17□□□□□ -1.1
MCF2L-231ENST00000494043 GATD1Q8NB37 220 aa8.17□□□□□ -1.1
MCF2L-231ENST00000494043 AP1S3Q96PC3 154 aa8.17□□□□□ -1.1
MCF2L-231ENST00000494043 B9D2Q9BPU9 175 aa8.17□□□□□ -1.1
MCF2L-231ENST00000494043 MUC4Q99102 2169 aa8.17□□□□□ -1.1
MCF2L-231ENST00000494043 TRGV1A0A0A0MS02 117 aa8.16□□□□□ -1.1
MCF2L-231ENST00000494043 DEFB4AO15263 64 aa8.16□□□□□ -1.1
MCF2L-231ENST00000494043 TRGC1P0CF51 173 aa8.16□□□□□ -1.1
MCF2L-231ENST00000494043 RAB5AP20339 215 aa8.16□□□□□ -1.1
MCF2L-231ENST00000494043 TMEM136Q6ZRR5 245 aa8.16□□□□□ -1.1
MCF2L-231ENST00000494043 Q6ZTI0 123 aa8.16□□□□□ -1.1
MCF2L-231ENST00000494043 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.16□□□□□ -1.1
MCF2L-231ENST00000494043 RASL10AQ92737 203 aa8.16□□□□□ -1.1
MCF2L-231ENST00000494043 NDUFAF3Q9BU61 184 aa8.16□□□□□ -1.1
MCF2L-231ENST00000494043 GNB1LQ9BYB4 327 aa8.16□□□□□ -1.1
MCF2L-231ENST00000494043 TENM3Q9P273 2699 aa8.15□□□□□ -1.1
MCF2L-231ENST00000494043 LYRM9A8MSI8 78 aa8.15□□□□□ -1.1
MCF2L-231ENST00000494043 RAB4BP61018 213 aa8.15□□□□□ -1.1
MCF2L-231ENST00000494043 SMIM15Q7Z3B0 74 aa8.15□□□□□ -1.1
MCF2L-231ENST00000494043 TMEM191AQ9H0A3 160 aa8.15□□□□□ -1.1
MCF2L-231ENST00000494043 C11orf68Q9H3H3 251 aaKnown RBP8.15□□□□□ -1.1
MCF2L-231ENST00000494043 JPT2Q9H910 190 aa8.15□□□□□ -1.1
MCF2L-231ENST00000494043 DNAH9Q9NYC9 4486 aa8.14□□□□□ -1.11
MCF2L-231ENST00000494043 A8MWV9 139 aa8.14□□□□□ -1.11
MCF2L-231ENST00000494043 HLA-DQA1P01909 254 aa8.14□□□□□ -1.11
MCF2L-231ENST00000494043 MT-ND6P03923 174 aa8.14□□□□□ -1.11
MCF2L-231ENST00000494043 EVI2AP22794 236 aa8.14□□□□□ -1.11
MCF2L-231ENST00000494043 RPS10P46783 165 aaKnown RBP8.14□□□□□ -1.11
MCF2L-231ENST00000494043 LINC00612Q8N6U2 182 aa8.14□□□□□ -1.11
MCF2L-231ENST00000494043 ZMAT4Q9H898 229 aa8.14□□□□□ -1.11
MCF2L-231ENST00000494043 DKK2Q9UBU2 259 aa8.14□□□□□ -1.11
MCF2L-231ENST00000494043 HUWE1Q7Z6Z7 4374 aaKnown RBP8.13□□□□□ -1.11
MCF2L-231ENST00000494043 A0A087WWL8 130 aa8.13□□□□□ -1.11
MCF2L-231ENST00000494043 GAGE12BA1L429 117 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms