RNA–Protein interactions for RNA: ENST00000492479.1

PTPRE-210, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 866 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-210ENST00000492479 H3BVH4 76 aa9.89□□□□□ -0.83
PTPRE-210ENST00000492479 K7EIL1 84 aa9.89□□□□□ -0.83
PTPRE-210ENST00000492479 S100A8P05109 93 aa9.89□□□□□ -0.83
PTPRE-210ENST00000492479 S100A4P26447 101 aaKnown RBP9.89□□□□□ -0.83
PTPRE-210ENST00000492479 HBBP68871 147 aa9.89□□□□□ -0.83
PTPRE-210ENST00000492479 ZNF415Q09FC8 603 aa9.89□□□□□ -0.83
PTPRE-210ENST00000492479 RIGQ13278 110 aa9.89□□□□□ -0.83
PTPRE-210ENST00000492479 RNF183Q96D59 192 aa9.89□□□□□ -0.83
PTPRE-210ENST00000492479 SPXQ9BT56 116 aa9.89□□□□□ -0.83
PTPRE-210ENST00000492479 TMEM208Q9BTX3 173 aa9.89□□□□□ -0.83
PTPRE-210ENST00000492479 MDFICQ9P1T7 246 aa9.89□□□□□ -0.83
PTPRE-210ENST00000492479 SPRY2O43597 315 aa9.88□□□□□ -0.83
PTPRE-210ENST00000492479 MT-ND6P03923 174 aa9.88□□□□□ -0.83
PTPRE-210ENST00000492479 FRMD6-AS1P0C7T7 363 aa9.88□□□□□ -0.83
PTPRE-210ENST00000492479 RAB5AP20339 215 aa9.88□□□□□ -0.83
PTPRE-210ENST00000492479 OR10AG1Q8NH19 301 aa9.88□□□□□ -0.83
PTPRE-210ENST00000492479 BORCS7Q96B45 105 aa9.88□□□□□ -0.83
PTPRE-210ENST00000492479 C16orf74Q96GX8 76 aa9.88□□□□□ -0.83
PTPRE-210ENST00000492479 GNB1LQ9BYB4 327 aa9.88□□□□□ -0.83
PTPRE-210ENST00000492479 X6R8D5 127 aa9.88□□□□□ -0.83
PTPRE-210ENST00000492479 PLAC8L1A1L4L8 177 aa9.87□□□□□ -0.83
PTPRE-210ENST00000492479 DAZ2Q13117 558 aaKnown RBP9.87□□□□□ -0.83
PTPRE-210ENST00000492479 DMRTA1Q5VZB9 504 aa9.87□□□□□ -0.83
PTPRE-210ENST00000492479 ZFP82Q8N141 532 aa9.87□□□□□ -0.83
PTPRE-210ENST00000492479 HLA-DQA1P01909 254 aa9.86□□□□□ -0.83
PTPRE-210ENST00000492479 RRN3P1Q2M238 152 aa9.86□□□□□ -0.83
PTPRE-210ENST00000492479 MRPL54Q6P161 138 aaKnown RBP9.86□□□□□ -0.83
PTPRE-210ENST00000492479 TMEM136Q6ZRR5 245 aa9.86□□□□□ -0.83
PTPRE-210ENST00000492479 RCHY1Q96PM5 261 aa9.86□□□□□ -0.83
PTPRE-210ENST00000492479 OVOL2Q9BRP0 275 aa9.86□□□□□ -0.83
PTPRE-210ENST00000492479 PHLDA3Q9Y5J5 127 aa9.86□□□□□ -0.83
PTPRE-210ENST00000492479 M0R2P5 195 aa9.85□□□□□ -0.83
PTPRE-210ENST00000492479 AZU1P20160 251 aa9.85□□□□□ -0.83
PTPRE-210ENST00000492479 NTF3P20783 257 aa9.85□□□□□ -0.83
PTPRE-210ENST00000492479 DEFB135Q30KP9 77 aa9.85□□□□□ -0.83
PTPRE-210ENST00000492479 LGALS9BQ3B8N2 356 aa9.85□□□□□ -0.83
PTPRE-210ENST00000492479 RASL10AQ92737 203 aa9.85□□□□□ -0.83
PTPRE-210ENST00000492479 TPPP3Q9BW30 176 aa9.85□□□□□ -0.83
PTPRE-210ENST00000492479 TMEM191AQ9H0A3 160 aa9.85□□□□□ -0.83
PTPRE-210ENST00000492479 GSN-AS1Q9NRJ2 163 aa9.85□□□□□ -0.83
PTPRE-210ENST00000492479 PHOX2AO14813 284 aa9.84□□□□□ -0.83
PTPRE-210ENST00000492479 SPINK4O60575 86 aa9.84□□□□□ -0.83
PTPRE-210ENST00000492479 TRGC1P0CF51 173 aa9.84□□□□□ -0.83
PTPRE-210ENST00000492479 MIFP14174 115 aa9.84□□□□□ -0.83
PTPRE-210ENST00000492479 SPANXN1Q5VSR9 72 aa9.84□□□□□ -0.83
PTPRE-210ENST00000492479 SYT8Q8NBV8 401 aa9.84□□□□□ -0.83
PTPRE-210ENST00000492479 IGHV3OR16-12A0A075B7B8 117 aa9.83□□□□□ -0.84
PTPRE-210ENST00000492479 PRM2P04554 102 aa9.83□□□□□ -0.84
PTPRE-210ENST00000492479 LINC00612Q8N6U2 182 aa9.83□□□□□ -0.84
PTPRE-210ENST00000492479 POM121L12Q8N7R1 296 aa9.83□□□□□ -0.84
PTPRE-210ENST00000492479 Q8NAQ8 132 aa9.83□□□□□ -0.84
PTPRE-210ENST00000492479 FRZBQ92765 325 aa9.83□□□□□ -0.84
PTPRE-210ENST00000492479 MSRB1Q9NZV6 116 aa9.83□□□□□ -0.84
PTPRE-210ENST00000492479 NBEAL2Q6ZNJ1 2754 aa9.82□□□□□ -0.84
PTPRE-210ENST00000492479 TWIST1Q15672 202 aa9.82□□□□□ -0.84
PTPRE-210ENST00000492479 OR11H2Q8NH07 326 aa9.82□□□□□ -0.84
PTPRE-210ENST00000492479 C18orf15Q96N68 181 aa9.82□□□□□ -0.84
PTPRE-210ENST00000492479 AP1S3Q96PC3 154 aa9.82□□□□□ -0.84
PTPRE-210ENST00000492479 TM2D3Q9BRN9 247 aa9.82□□□□□ -0.84
PTPRE-210ENST00000492479 KIF25-AS1Q9Y6Z4 181 aa9.82□□□□□ -0.84
PTPRE-210ENST00000492479 NACAE9PAV3 2078 aa9.81□□□□□ -0.84
PTPRE-210ENST00000492479 SNURFLB1AK76 121 aa9.81□□□□□ -0.84
PTPRE-210ENST00000492479 M0R381 172 aa9.81□□□□□ -0.84
PTPRE-210ENST00000492479 HTN1P15515 57 aa9.81□□□□□ -0.84
PTPRE-210ENST00000492479 RPS10P46783 165 aaKnown RBP9.81□□□□□ -0.84
PTPRE-210ENST00000492479 CAMPP49913 170 aa9.81□□□□□ -0.84
PTPRE-210ENST00000492479 ZNF876PQ49A33 203 aa9.81□□□□□ -0.84
PTPRE-210ENST00000492479 FAM104BQ5XKR9 115 aa9.81□□□□□ -0.84
PTPRE-210ENST00000492479 TIMM8BQ9Y5J9 83 aaPredicted RBP9.81□□□□□ -0.84
PTPRE-210ENST00000492479 MUC21A0A0G2JKD1 596 aa9.8□□□□□ -0.84
PTPRE-210ENST00000492479 MUC21A0A140T8X8 626 aa9.8□□□□□ -0.84
PTPRE-210ENST00000492479 A8MWV9 139 aa9.8□□□□□ -0.84
PTPRE-210ENST00000492479 PRB2P02812 416 aaPredicted RBP9.8□□□□□ -0.84
PTPRE-210ENST00000492479 LINC00315P59091 139 aa9.8□□□□□ -0.84
PTPRE-210ENST00000492479 UFSP1Q6NVU6 142 aa9.8□□□□□ -0.84
PTPRE-210ENST00000492479 TRAPPC1Q9Y5R8 145 aa9.8□□□□□ -0.84
PTPRE-210ENST00000492479 LYRM9A8MSI8 78 aa9.79□□□□□ -0.84
PTPRE-210ENST00000492479 CIDEAO60543 219 aa9.79□□□□□ -0.84
PTPRE-210ENST00000492479 CRYGDP07320 174 aa9.79□□□□□ -0.84
PTPRE-210ENST00000492479 EVI2AP22794 236 aa9.79□□□□□ -0.84
PTPRE-210ENST00000492479 SLAQ13239 276 aa9.79□□□□□ -0.84
PTPRE-210ENST00000492479 SMIM15Q7Z3B0 74 aa9.79□□□□□ -0.84
PTPRE-210ENST00000492479 RNF185Q96GF1 192 aa9.79□□□□□ -0.84
PTPRE-210ENST00000492479 MRPL18Q9H0U6 180 aaKnown RBP9.79□□□□□ -0.84
PTPRE-210ENST00000492479 C11orf68Q9H3H3 251 aaKnown RBP9.79□□□□□ -0.84
PTPRE-210ENST00000492479 DPH3P1Q9H4G8 78 aa9.79□□□□□ -0.84
PTPRE-210ENST00000492479 EDA2RQ9HAV5 297 aa9.79□□□□□ -0.84
PTPRE-210ENST00000492479 U3KQK5 164 aa9.79□□□□□ -0.84
PTPRE-210ENST00000492479 IGHV4-28A0A0C4DH34 117 aa9.78□□□□□ -0.84
PTPRE-210ENST00000492479 RS1O15537 224 aa9.78□□□□□ -0.84
PTPRE-210ENST00000492479 APCSP02743 223 aa9.78□□□□□ -0.84
PTPRE-210ENST00000492479 TRGC2P03986 189 aa9.78□□□□□ -0.84
PTPRE-210ENST00000492479 RAB4AP20338 218 aa9.78□□□□□ -0.84
PTPRE-210ENST00000492479 ZFP2Q6ZN57 461 aa9.78□□□□□ -0.84
PTPRE-210ENST00000492479 SBSPONQ8IVN8 264 aa9.78□□□□□ -0.84
PTPRE-210ENST00000492479 SPATA25Q9BR10 227 aa9.78□□□□□ -0.84
PTPRE-210ENST00000492479 TEX48A0A1B0GUV7 120 aa9.77□□□□□ -0.85
PTPRE-210ENST00000492479 RHODO00212 210 aa9.77□□□□□ -0.85
PTPRE-210ENST00000492479 PPBPP02775 128 aa9.77□□□□□ -0.85
PTPRE-210ENST00000492479 RAB4BP61018 213 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms