RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 SLC25A5P05141 298 aaKnown RBP2.46□□□□□ -2.02
BRCA1-212ENST00000473961 MGST1P10620 155 aaKnown RBP2.46□□□□□ -2.02
BRCA1-212ENST00000473961 IAPPP10997 89 aa2.46□□□□□ -2.02
BRCA1-212ENST00000473961 CNTFRP26992 372 aa2.46□□□□□ -2.02
BRCA1-212ENST00000473961 ASIPP42127 132 aa2.46□□□□□ -2.02
BRCA1-212ENST00000473961 CSN1S1P47710 185 aa2.46□□□□□ -2.02
BRCA1-212ENST00000473961 MP68P56378 58 aa2.46□□□□□ -2.02
BRCA1-212ENST00000473961 RPS28P62857 69 aaKnown RBP2.46□□□□□ -2.02
BRCA1-212ENST00000473961 MOBPQ13875 183 aa2.46□□□□□ -2.02
BRCA1-212ENST00000473961 RTL8BQ17RB0 113 aa2.46□□□□□ -2.02
BRCA1-212ENST00000473961 LGALS9BQ3B8N2 356 aa2.46□□□□□ -2.02
BRCA1-212ENST00000473961 KIAA2026Q5HYC2 2103 aa2.46□□□□□ -2.02
BRCA1-212ENST00000473961 MEIG1Q5JSS6 88 aa2.46□□□□□ -2.02
BRCA1-212ENST00000473961 IBA57Q5T440 356 aaKnown RBP2.46□□□□□ -2.02
BRCA1-212ENST00000473961 LGALS9CQ6DKI2 356 aa2.46□□□□□ -2.02
BRCA1-212ENST00000473961 ZNF818PQ6ZRF7 136 aa2.46□□□□□ -2.02
BRCA1-212ENST00000473961 SSX8Q7RTT4 187 aa2.46□□□□□ -2.02
BRCA1-212ENST00000473961 OR13C6PQ8NH95 151 aa2.46□□□□□ -2.02
BRCA1-212ENST00000473961 WFDC5Q8TCV5 224 aa2.46□□□□□ -2.02
BRCA1-212ENST00000473961 RMI2Q96E14 147 aa2.46□□□□□ -2.02
BRCA1-212ENST00000473961 PRELID3AQ96N28 172 aa2.46□□□□□ -2.02
BRCA1-212ENST00000473961 NAA38Q9BRA0 125 aaKnown RBP2.46□□□□□ -2.02
BRCA1-212ENST00000473961 FBXL15Q9H469 300 aa2.46□□□□□ -2.02
BRCA1-212ENST00000473961 HILPDAQ9Y5L2 63 aa2.46□□□□□ -2.02
BRCA1-212ENST00000473961 MPC1Q9Y5U8 109 aa2.46□□□□□ -2.02
BRCA1-212ENST00000473961 COL27A1Q8IZC6 1860 aaPredicted RBP2.45□□□□□ -2.02
BRCA1-212ENST00000473961 KIAA1549LQ6ZVL6 1849 aa2.45□□□□□ -2.02
BRCA1-212ENST00000473961 DOCK11Q5JSL3 2073 aa2.45□□□□□ -2.02
BRCA1-212ENST00000473961 HEATR5BQ9P2D3 2071 aa2.45□□□□□ -2.02
BRCA1-212ENST00000473961 A0A1B0GX51 115 aa2.45□□□□□ -2.02
BRCA1-212ENST00000473961 A0A1W2PNU3 283 aaPredicted RBP2.45□□□□□ -2.02
BRCA1-212ENST00000473961 C15orf65H3BRN8 121 aa2.45□□□□□ -2.02
BRCA1-212ENST00000473961 CCDC179H3BU77 68 aa2.45□□□□□ -2.02
BRCA1-212ENST00000473961 SPINK4O60575 86 aa2.45□□□□□ -2.02
BRCA1-212ENST00000473961 SNCGO76070 127 aa2.45□□□□□ -2.02
BRCA1-212ENST00000473961 ARL14EPLP0DKL9 152 aa2.45□□□□□ -2.02
BRCA1-212ENST00000473961 HLA-DRB4P13762 266 aa2.45□□□□□ -2.02
BRCA1-212ENST00000473961 GCHFRP30047 84 aa2.45□□□□□ -2.02
BRCA1-212ENST00000473961 FAM53BQ14153 422 aa2.45□□□□□ -2.02
BRCA1-212ENST00000473961 CENPWQ5EE01 88 aa2.45□□□□□ -2.02
BRCA1-212ENST00000473961 LYRM7Q5U5X0 104 aa2.45□□□□□ -2.02
BRCA1-212ENST00000473961 IGFL3Q6UXB1 125 aa2.45□□□□□ -2.02
BRCA1-212ENST00000473961 VN1R4Q7Z5H5 301 aa2.45□□□□□ -2.02
BRCA1-212ENST00000473961 RPRMLQ8N4K4 120 aa2.45□□□□□ -2.02
BRCA1-212ENST00000473961 C3orf22Q8N5N4 141 aa2.45□□□□□ -2.02
BRCA1-212ENST00000473961 NUP35Q8NFH5 326 aa2.45□□□□□ -2.02
BRCA1-212ENST00000473961 OR51H1Q8NH63 302 aa2.45□□□□□ -2.02
BRCA1-212ENST00000473961 FXYD5Q96DB9 178 aa2.45□□□□□ -2.02
BRCA1-212ENST00000473961 RNASE7Q9H1E1 156 aaKnown RBP2.45□□□□□ -2.02
BRCA1-212ENST00000473961 TMEM167BQ9NRX6 74 aa2.45□□□□□ -2.02
BRCA1-212ENST00000473961 IDI2-AS1Q9NZ38 188 aa2.45□□□□□ -2.02
BRCA1-212ENST00000473961 TP73-AS1Q9UF72 201 aa2.45□□□□□ -2.02
BRCA1-212ENST00000473961 HLA-DRB4X5D2U9 266 aa2.45□□□□□ -2.02
BRCA1-212ENST00000473961 TMED7-TICAM2A0A0A6YYA0 188 aa2.44□□□□□ -2.02
BRCA1-212ENST00000473961 TRAV5A0A0B4J249 113 aa2.44□□□□□ -2.02
BRCA1-212ENST00000473961 A0A1W2PQD3 144 aa2.44□□□□□ -2.02
BRCA1-212ENST00000473961 TCRBV4S1A1TA0A5B7 111 aa2.44□□□□□ -2.02
BRCA1-212ENST00000473961 C16orf90A8MZG2 172 aa2.44□□□□□ -2.02
BRCA1-212ENST00000473961 GGTLC3B5MD39 225 aa2.44□□□□□ -2.02
BRCA1-212ENST00000473961 J3KT08 172 aa2.44□□□□□ -2.02
BRCA1-212ENST00000473961 IGKV1-5P01602 117 aa2.44□□□□□ -2.02
BRCA1-212ENST00000473961 STATHP02808 62 aa2.44□□□□□ -2.02
BRCA1-212ENST00000473961 INSL3P51460 131 aa2.44□□□□□ -2.02
BRCA1-212ENST00000473961 RPL30P62888 115 aaKnown RBP2.44□□□□□ -2.02
BRCA1-212ENST00000473961 HBBP68871 147 aa2.44□□□□□ -2.02
BRCA1-212ENST00000473961 TFF3Q07654 80 aa2.44□□□□□ -2.02
BRCA1-212ENST00000473961 LY6EQ16553 131 aa2.44□□□□□ -2.02
BRCA1-212ENST00000473961 RRN3P1Q2M238 152 aa2.44□□□□□ -2.02
BRCA1-212ENST00000473961 TBC1D28Q2M2D7 210 aa2.44□□□□□ -2.02
BRCA1-212ENST00000473961 C12orf74Q32Q52 190 aa2.44□□□□□ -2.02
BRCA1-212ENST00000473961 DEFB134Q4QY38 66 aa2.44□□□□□ -2.02
BRCA1-212ENST00000473961 GDF5OSQ5U4N7 250 aa2.44□□□□□ -2.02
BRCA1-212ENST00000473961 CFAP126Q5VTH2 177 aa2.44□□□□□ -2.02
BRCA1-212ENST00000473961 IGFL1Q6UW32 110 aa2.44□□□□□ -2.02
BRCA1-212ENST00000473961 Q6ZQT7 251 aa2.44□□□□□ -2.02
BRCA1-212ENST00000473961 TEN1Q86WV5 123 aa2.44□□□□□ -2.02
BRCA1-212ENST00000473961 SBSPONQ8IVN8 264 aa2.44□□□□□ -2.02
BRCA1-212ENST00000473961 COX14Q96I36 57 aa2.44□□□□□ -2.02
BRCA1-212ENST00000473961 PRTFDC1Q9NRG1 225 aa2.44□□□□□ -2.02
BRCA1-212ENST00000473961 Q9Y3F1 56 aa2.44□□□□□ -2.02
BRCA1-212ENST00000473961 NCKAP5O14513 1909 aa2.44□□□□□ -2.02
BRCA1-212ENST00000473961 ATG2BQ96BY7 2078 aa2.43□□□□□ -2.02
BRCA1-212ENST00000473961 ARID1AO14497 2285 aa2.43□□□□□ -2.02
BRCA1-212ENST00000473961 TRBV20-1A0A075B6N2 111 aa2.43□□□□□ -2.02
BRCA1-212ENST00000473961 C9JAW5 83 aa2.43□□□□□ -2.02
BRCA1-212ENST00000473961 IGLV3-19P01714 112 aa2.43□□□□□ -2.02
BRCA1-212ENST00000473961 PRB2P02812 416 aaPredicted RBP2.43□□□□□ -2.02
BRCA1-212ENST00000473961 ORM2P19652 201 aa2.43□□□□□ -2.02
BRCA1-212ENST00000473961 FXYD2P54710 66 aa2.43□□□□□ -2.02
BRCA1-212ENST00000473961 EDDM3BP56851 147 aa2.43□□□□□ -2.02
BRCA1-212ENST00000473961 RBM11P57052 281 aaKnown RBP2.43□□□□□ -2.02
BRCA1-212ENST00000473961 DIAPH2-AS1Q14236 149 aa2.43□□□□□ -2.02
BRCA1-212ENST00000473961 FXYD3Q14802 87 aa2.43□□□□□ -2.02
BRCA1-212ENST00000473961 KPRPQ5T749 579 aaPredicted RBP2.43□□□□□ -2.02
BRCA1-212ENST00000473961 SCGB1D4Q6XE38 83 aa2.43□□□□□ -2.02
BRCA1-212ENST00000473961 ZNRF2Q8NHG8 242 aa2.43□□□□□ -2.02
BRCA1-212ENST00000473961 BORCS8Q96FH0 119 aa2.43□□□□□ -2.02
BRCA1-212ENST00000473961 IGF2BP2-AS1Q96M15 143 aa2.43□□□□□ -2.02
BRCA1-212ENST00000473961 SHANK2-AS3Q9BTD1 123 aa2.43□□□□□ -2.02
BRCA1-212ENST00000473961 ENY2Q9NPA8 101 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms