RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 ABCA12Q86UK0 2595 aa-0.01□□□□□ -2.41
NUCKS1-202ENST00000464938 C9JAW5 83 aa-0.01□□□□□ -2.41
NUCKS1-202ENST00000464938 DEGS1O15121 323 aa-0.01□□□□□ -2.41
NUCKS1-202ENST00000464938 PAEPP09466 180 aa-0.01□□□□□ -2.41
NUCKS1-202ENST00000464938 PYYP10082 97 aa-0.01□□□□□ -2.41
NUCKS1-202ENST00000464938 HLA-DRB4P13762 266 aa-0.01□□□□□ -2.41
NUCKS1-202ENST00000464938 AKR1D1P51857 326 aa-0.01□□□□□ -2.41
NUCKS1-202ENST00000464938 EMX2Q04743 252 aa-0.01□□□□□ -2.41
NUCKS1-202ENST00000464938 IQCJQ1A5X6 159 aa-0.01□□□□□ -2.41
NUCKS1-202ENST00000464938 MORN2Q502X0 79 aa-0.01□□□□□ -2.41
NUCKS1-202ENST00000464938 UNQ5815/PRO19632Q6UWF5 114 aa-0.01□□□□□ -2.41
NUCKS1-202ENST00000464938 SLC25A26Q70HW3 274 aa-0.01□□□□□ -2.41
NUCKS1-202ENST00000464938 TAC4Q86UU9 113 aa-0.01□□□□□ -2.41
NUCKS1-202ENST00000464938 TAS2R8Q9NYW2 309 aa-0.01□□□□□ -2.41
NUCKS1-202ENST00000464938 HIGD1AQ9Y241 93 aa-0.01□□□□□ -2.41
NUCKS1-202ENST00000464938 HLA-DRB4X5D2U9 266 aa-0.01□□□□□ -2.41
NUCKS1-202ENST00000464938 ABCA4P78363 2273 aa-0.01□□□□□ -2.41
NUCKS1-202ENST00000464938 NINQ8N4C6 2090 aa-0.01□□□□□ -2.41
NUCKS1-202ENST00000464938 HELZP42694 1942 aaKnown RBP-0.01□□□□□ -2.41
NUCKS1-202ENST00000464938 POLQO75417 2590 aa-0.01□□□□□ -2.41
NUCKS1-202ENST00000464938 ABCA1O95477 2261 aa-0.02□□□□□ -2.41
NUCKS1-202ENST00000464938 TRAV12-2A0A075B6T6 113 aa-0.02□□□□□ -2.41
NUCKS1-202ENST00000464938 A0A087WTM6 91 aa-0.02□□□□□ -2.41
NUCKS1-202ENST00000464938 MCRIP1C9JLW8 97 aa-0.02□□□□□ -2.41
NUCKS1-202ENST00000464938 ELOF1P60002 83 aaKnown RBP-0.02□□□□□ -2.41
NUCKS1-202ENST00000464938 TMEM244Q5VVB8 128 aa-0.02□□□□□ -2.41
NUCKS1-202ENST00000464938 OR2T2Q6IF00 324 aa-0.02□□□□□ -2.41
NUCKS1-202ENST00000464938 NDUFA11Q86Y39 141 aa-0.02□□□□□ -2.41
NUCKS1-202ENST00000464938 TCTE3Q8IZS6 198 aa-0.02□□□□□ -2.41
NUCKS1-202ENST00000464938 ATP6V0E2Q8NHE4 81 aa-0.02□□□□□ -2.41
NUCKS1-202ENST00000464938 BANF2Q9H503 90 aa-0.02□□□□□ -2.41
NUCKS1-202ENST00000464938 CASZ1Q86V15 1759 aa-0.02□□□□□ -2.41
NUCKS1-202ENST00000464938 UNC13BO14795 1591 aa-0.02□□□□□ -2.41
NUCKS1-202ENST00000464938 CDK13Q14004 1512 aaKnown RBP-0.03□□□□□ -2.41
NUCKS1-202ENST00000464938 SOGA1O94964 1423 aa-0.03□□□□□ -2.41
NUCKS1-202ENST00000464938 TNS1Q9HBL0 1735 aaKnown RBP-0.03□□□□□ -2.41
NUCKS1-202ENST00000464938 BORCS7-ASMTA0A0B4J1R7 106 aa-0.03□□□□□ -2.41
NUCKS1-202ENST00000464938 TRAV17A0A0B4J275 112 aa-0.03□□□□□ -2.41
NUCKS1-202ENST00000464938 VMO1Q7Z5L0 202 aa-0.03□□□□□ -2.41
NUCKS1-202ENST00000464938 MAGOHBQ96A72 148 aaKnown RBP-0.03□□□□□ -2.41
NUCKS1-202ENST00000464938 DSCR8Q96T75 97 aa-0.03□□□□□ -2.41
NUCKS1-202ENST00000464938 SPANXA1Q9NS26 97 aa-0.03□□□□□ -2.41
NUCKS1-202ENST00000464938 SPANXCQ9NY87 97 aa-0.03□□□□□ -2.41
NUCKS1-202ENST00000464938 LAMC3Q9Y6N6 1575 aa-0.03□□□□□ -2.41
NUCKS1-202ENST00000464938 M0R2P5 195 aa-0.04□□□□□ -2.42
NUCKS1-202ENST00000464938 SMIM24O75264 130 aa-0.04□□□□□ -2.42
NUCKS1-202ENST00000464938 SCGB1A1P11684 91 aa-0.04□□□□□ -2.42
NUCKS1-202ENST00000464938 SLC25A6P12236 298 aa-0.04□□□□□ -2.42
NUCKS1-202ENST00000464938 CCDC153Q494R4 210 aa-0.04□□□□□ -2.42
NUCKS1-202ENST00000464938 ATP11AUNQ6ZP68 121 aa-0.04□□□□□ -2.42
NUCKS1-202ENST00000464938 SNX29P2Q8IUI4 249 aa-0.04□□□□□ -2.42
NUCKS1-202ENST00000464938 DYNLRB2Q8TF09 96 aa-0.04□□□□□ -2.42
NUCKS1-202ENST00000464938 TMEM141Q96I45 108 aa-0.04□□□□□ -2.42
NUCKS1-202ENST00000464938 VPS25Q9BRG1 176 aa-0.04□□□□□ -2.42
NUCKS1-202ENST00000464938 COA4Q9NYJ1 87 aa-0.04□□□□□ -2.42
NUCKS1-202ENST00000464938 BET1LQ9NYM9 111 aa-0.04□□□□□ -2.42
NUCKS1-202ENST00000464938 LSM2Q9Y333 95 aaKnown RBP-0.04□□□□□ -2.42
NUCKS1-202ENST00000464938 SSC5DA1L4H1 1573 aa-0.04□□□□□ -2.42
NUCKS1-202ENST00000464938 VIRMAQ69YN4 1812 aaKnown RBP-0.04□□□□□ -2.42
NUCKS1-202ENST00000464938 NCOR2Q9Y618 2525 aa-0.05□□□□□ -2.42
NUCKS1-202ENST00000464938 ANKRD30AQ9BXX3 1397 aa-0.05□□□□□ -2.42
NUCKS1-202ENST00000464938 SSPOA2VEC9 5147 aa-0.05□□□□□ -2.42
NUCKS1-202ENST00000464938 ADGRB1O14514 1584 aa-0.05□□□□□ -2.42
NUCKS1-202ENST00000464938 HRNRQ86YZ3 2850 aaPredicted RBP-0.05□□□□□ -2.42
NUCKS1-202ENST00000464938 PTPRZ1P23471 2315 aaPredicted RBP-0.05□□□□□ -2.42
NUCKS1-202ENST00000464938 GVQW2A0A096LPI5 108 aaPredicted RBP-0.05□□□□□ -2.42
NUCKS1-202ENST00000464938 YPEL1O60688 119 aa-0.05□□□□□ -2.42
NUCKS1-202ENST00000464938 TFF1P04155 84 aa-0.05□□□□□ -2.42
NUCKS1-202ENST00000464938 CCL3L1P16619 93 aa-0.05□□□□□ -2.42
NUCKS1-202ENST00000464938 MRPL40Q9NQ50 206 aaKnown RBP-0.05□□□□□ -2.42
NUCKS1-202ENST00000464938 CALML5Q9NZT1 146 aa-0.05□□□□□ -2.42
NUCKS1-202ENST00000464938 NOP16Q9Y3C1 178 aaKnown RBP-0.05□□□□□ -2.42
NUCKS1-202ENST00000464938 ERCC6Q03468 1493 aa-0.05□□□□□ -2.42
NUCKS1-202ENST00000464938 PLXNA1Q9UIW2 1896 aa-0.05□□□□□ -2.42
NUCKS1-202ENST00000464938 SYNJ1O43426 1573 aa-0.06□□□□□ -2.42
NUCKS1-202ENST00000464938 MED13LQ71F56 2210 aa-0.06□□□□□ -2.42
NUCKS1-202ENST00000464938 LAMB1P07942 1786 aa-0.06□□□□□ -2.42
NUCKS1-202ENST00000464938 IGSF10Q6WRI0 2623 aa-0.06□□□□□ -2.42
NUCKS1-202ENST00000464938 TRBV20-1A0A075B6N2 111 aa-0.06□□□□□ -2.42
NUCKS1-202ENST00000464938 ZNF670-ZNF695F2Z2N8 137 aa-0.06□□□□□ -2.42
NUCKS1-202ENST00000464938 CCDC179H3BU77 68 aa-0.06□□□□□ -2.42
NUCKS1-202ENST00000464938 J3QLW9 94 aa-0.06□□□□□ -2.42
NUCKS1-202ENST00000464938 APOC1P02654 83 aa-0.06□□□□□ -2.42
NUCKS1-202ENST00000464938 RBP4P02753 201 aa-0.06□□□□□ -2.42
NUCKS1-202ENST00000464938 DBIP07108 87 aaKnown RBP-0.06□□□□□ -2.42
NUCKS1-202ENST00000464938 CMPK1P30085 196 aa-0.06□□□□□ -2.42
NUCKS1-202ENST00000464938 NPC2P61916 151 aa-0.06□□□□□ -2.42
NUCKS1-202ENST00000464938 CLLU1Q5K131 121 aa-0.06□□□□□ -2.42
NUCKS1-202ENST00000464938 PPP1R1CQ8WVI7 109 aa-0.06□□□□□ -2.42
NUCKS1-202ENST00000464938 IFI27L1Q96BM0 104 aa-0.06□□□□□ -2.42
NUCKS1-202ENST00000464938 BPESC1Q9GZL8 116 aa-0.06□□□□□ -2.42
NUCKS1-202ENST00000464938 ERG28Q9UKR5 140 aa-0.06□□□□□ -2.42
NUCKS1-202ENST00000464938 OVOS2A0A0J9YW53 1432 aa-0.06□□□□□ -2.42
NUCKS1-202ENST00000464938 OVOS2Q6IE36 1432 aa-0.06□□□□□ -2.42
NUCKS1-202ENST00000464938 PRG4Q92954 1404 aaPredicted RBP-0.06□□□□□ -2.42
NUCKS1-202ENST00000464938 HIVEP3Q5T1R4 2406 aa-0.06□□□□□ -2.42
NUCKS1-202ENST00000464938 F5P12259 2224 aa-0.07□□□□□ -2.42
NUCKS1-202ENST00000464938 TCRBV3S1A0A5B6 114 aa-0.07□□□□□ -2.42
NUCKS1-202ENST00000464938 TSPAN19P0C672 248 aa-0.07□□□□□ -2.42
NUCKS1-202ENST00000464938 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.07□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms