RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 AEBP2Q6ZN18 517 aaPredicted RBP11.99□□□□□ -0.49
NUCKS1-202ENST00000464938 CHIC1Q5VXU3 224 aa11.08□□□□□ -0.64
NUCKS1-202ENST00000464938 SENP3Q9H4L4 574 aaPredicted RBP10.17□□□□□ -0.78
NUCKS1-202ENST00000464938 PHF23Q9BUL5 403 aaPredicted RBP10.02□□□□□ -0.81
NUCKS1-202ENST00000464938 FOXD1Q16676 465 aa9.56□□□□□ -0.88
NUCKS1-202ENST00000464938 POTEDQ86YR6 584 aa9.29□□□□□ -0.92
NUCKS1-202ENST00000464938 MSH5O43196 834 aa8.99□□□□□ -0.97
NUCKS1-202ENST00000464938 PIAS4Q8N2W9 510 aaPredicted RBP8.8□□□□□ -1
NUCKS1-202ENST00000464938 PPP6R1Q9UPN7 881 aa8.75□□□□□ -1.01
NUCKS1-202ENST00000464938 PLPPR3Q6T4P5 718 aa8.68□□□□□ -1.02
NUCKS1-202ENST00000464938 ADRA2BP18089 450 aa8.66□□□□□ -1.02
NUCKS1-202ENST00000464938 DMRT2Q9Y5R5 561 aa8.06□□□□□ -1.12
NUCKS1-202ENST00000464938 MAPK8IP2Q13387 824 aaPredicted RBP8.04□□□□□ -1.12
NUCKS1-202ENST00000464938 SCAF1Q9H7N4 1312 aaKnown RBP7.84□□□□□ -1.15
NUCKS1-202ENST00000464938 CACNB1Q02641 598 aaPredicted RBP7.83□□□□□ -1.16
NUCKS1-202ENST00000464938 RNF39Q9H2S5 420 aa7.71□□□□□ -1.18
NUCKS1-202ENST00000464938 HOXD11P31277 338 aaPredicted RBP7.68□□□□□ -1.18
NUCKS1-202ENST00000464938 DCAF8L1A6NGE4 600 aa7.6□□□□□ -1.19
NUCKS1-202ENST00000464938 PPP4R3CPQ6ZMV5 832 aa7.57□□□□□ -1.2
NUCKS1-202ENST00000464938 C1QBPQ07021 282 aaKnown RBP7.53□□□□□ -1.2
NUCKS1-202ENST00000464938 RNF216Q9NWF9 866 aaPredicted RBP7.52□□□□□ -1.21
NUCKS1-202ENST00000464938 CNKSR2Q8WXI2 1034 aa7.49□□□□□ -1.21
NUCKS1-202ENST00000464938 DNAJC5BQ9UF47 199 aa7.49□□□□□ -1.21
NUCKS1-202ENST00000464938 POTEHQ6S545 545 aa7.19□□□□□ -1.26
NUCKS1-202ENST00000464938 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.19□□□□□ -1.262e-39■■□□□ 13.3
NUCKS1-202ENST00000464938 NCBP3Q53F19 620 aaKnown RBP7.13□□□□□ -1.27
NUCKS1-202ENST00000464938 NPM3O75607 178 aaKnown RBP7.12□□□□□ -1.27
NUCKS1-202ENST00000464938 DSG3P32926 999 aa7.12□□□□□ -1.27
NUCKS1-202ENST00000464938 U3KPZ7 1027 aaPredicted RBP7.12□□□□□ -1.27
NUCKS1-202ENST00000464938 SPINK5Q9NQ38 1064 aaPredicted RBP7.08□□□□□ -1.28
NUCKS1-202ENST00000464938 CAPN15O75808 1086 aa6.99□□□□□ -1.29
NUCKS1-202ENST00000464938 SLC4A2P04920 1241 aa6.91□□□□□ -1.3
NUCKS1-202ENST00000464938 ZNF219Q9P2Y4 722 aaPredicted RBP6.84□□□□□ -1.31
NUCKS1-202ENST00000464938 ABCB7O75027 752 aa6.83□□□□□ -1.32
NUCKS1-202ENST00000464938 TRHP20396 242 aaPredicted RBP6.82□□□□□ -1.32
NUCKS1-202ENST00000464938 APLP2Q06481 763 aa6.76□□□□□ -1.33
NUCKS1-202ENST00000464938 KCNA4P22459 653 aa6.75□□□□□ -1.33
NUCKS1-202ENST00000464938 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.73□□□□□ -1.33
NUCKS1-202ENST00000464938 HNRNPUL2Q1KMD3 747 aaKnown RBP6.73□□□□□ -1.33
NUCKS1-202ENST00000464938 RBM42Q9BTD8 480 aaKnown RBP6.73□□□□□ -1.33
NUCKS1-202ENST00000464938 CHRDL2Q6WN34 429 aa6.71□□□□□ -1.34
NUCKS1-202ENST00000464938 SAMD1Q6SPF0 538 aaPredicted RBP6.7□□□□□ -1.34
NUCKS1-202ENST00000464938 SP7Q8TDD2 431 aaPredicted RBP6.62□□□□□ -1.35
NUCKS1-202ENST00000464938 POLA2Q14181 598 aa6.6□□□□□ -1.35
NUCKS1-202ENST00000464938 MYCNP04198 464 aaPredicted RBP6.56□□□□□ -1.36
NUCKS1-202ENST00000464938 AKT1S1Q96B36 256 aa6.55□□□□□ -1.36
NUCKS1-202ENST00000464938 PIP4P2Q8N4L2 257 aa6.52□□□□□ -1.37
NUCKS1-202ENST00000464938 REM2Q8IYK8 340 aaPredicted RBP6.49□□□□□ -1.37
NUCKS1-202ENST00000464938 ATF5Q9Y2D1 282 aaPredicted RBP6.49□□□□□ -1.37
NUCKS1-202ENST00000464938 FXR2P51116 673 aaKnown RBP eCLIP6.46□□□□□ -1.383e-19■□□□□ 10.8
NUCKS1-202ENST00000464938 PITPNM1O00562 1244 aa6.43□□□□□ -1.38
NUCKS1-202ENST00000464938 OSCARQ8IYS5 282 aa6.43□□□□□ -1.38
NUCKS1-202ENST00000464938 ZBTB12Q9Y330 459 aaPredicted RBP6.43□□□□□ -1.38
NUCKS1-202ENST00000464938 EVX2Q03828 476 aa6.41□□□□□ -1.38
NUCKS1-202ENST00000464938 HAX1O00165 279 aa6.39□□□□□ -1.39
NUCKS1-202ENST00000464938 SLC4A1APQ9BWU0 796 aaKnown RBP6.38□□□□□ -1.39
NUCKS1-202ENST00000464938 FOXD4L1Q9NU39 408 aa6.35□□□□□ -1.39
NUCKS1-202ENST00000464938 EHMT2Q96KQ7 1210 aa6.3□□□□□ -1.4
NUCKS1-202ENST00000464938 CSRNP3Q8WYN3 585 aa6.28□□□□□ -1.4
NUCKS1-202ENST00000464938 SPDYE2BA6NHP3 402 aa6.25□□□□□ -1.41
NUCKS1-202ENST00000464938 C19orf67A6NJJ6 358 aa6.25□□□□□ -1.41
NUCKS1-202ENST00000464938 ZBTB22O15209 634 aa6.25□□□□□ -1.41
NUCKS1-202ENST00000464938 SPDYE6P0CI01 402 aa6.25□□□□□ -1.41
NUCKS1-202ENST00000464938 SPDYE2Q495Y8 402 aa6.25□□□□□ -1.41
NUCKS1-202ENST00000464938 PRKAR2AP13861 404 aaKnown RBP6.22□□□□□ -1.41
NUCKS1-202ENST00000464938 GABBR2O75899 941 aa6.2□□□□□ -1.42
NUCKS1-202ENST00000464938 ATXN8OSP0DMR3 200 aa6.2□□□□□ -1.42
NUCKS1-202ENST00000464938 SSUH2Q9Y2M2 353 aa6.2□□□□□ -1.42
NUCKS1-202ENST00000464938 MKRN4PQ13434 485 aaPredicted RBP6.19□□□□□ -1.42
NUCKS1-202ENST00000464938 LHX8Q68G74 356 aa6.18□□□□□ -1.42
NUCKS1-202ENST00000464938 SPDYE1Q8NFV5 336 aaPredicted RBP6.18□□□□□ -1.42
NUCKS1-202ENST00000464938 POTEIP0CG38 1075 aa6.14□□□□□ -1.43
NUCKS1-202ENST00000464938 FBLN2P98095 1184 aa6.13□□□□□ -1.43
NUCKS1-202ENST00000464938 CLEC11AQ9Y240 323 aa6.13□□□□□ -1.43
NUCKS1-202ENST00000464938 CHADLQ6NUI6 762 aa6.11□□□□□ -1.43
NUCKS1-202ENST00000464938 ZNF692Q9BU19 519 aaPredicted RBP6.09□□□□□ -1.43
NUCKS1-202ENST00000464938 PRR29P0C7W0 189 aa6.01□□□□□ -1.45
NUCKS1-202ENST00000464938 CD44P16070 742 aaKnown RBP6.01□□□□□ -1.45
NUCKS1-202ENST00000464938 PABPN1Q86U42 306 aaKnown RBP eCLIP6.01□□□□□ -1.45
NUCKS1-202ENST00000464938 CLCN6P51797 869 aa5.99□□□□□ -1.45
NUCKS1-202ENST00000464938 FARP1Q9Y4F1 1045 aaPredicted RBP5.99□□□□□ -1.45
NUCKS1-202ENST00000464938 ZNF579Q8NAF0 562 aaKnown RBP5.96□□□□□ -1.46
NUCKS1-202ENST00000464938 OTUD5Q96G74 571 aa5.93□□□□□ -1.46
NUCKS1-202ENST00000464938 POTEB2H3BUK9 544 aa5.92□□□□□ -1.46
NUCKS1-202ENST00000464938 PLSCR2Q9NRY7 297 aa5.92□□□□□ -1.46
NUCKS1-202ENST00000464938 GALR2O43603 387 aaPredicted RBP5.89□□□□□ -1.47
NUCKS1-202ENST00000464938 DCBLD2Q96PD2 775 aa5.89□□□□□ -1.47
NUCKS1-202ENST00000464938 CREBZFQ9NS37 354 aa5.89□□□□□ -1.47
NUCKS1-202ENST00000464938 ZRANB1Q9UGI0 708 aa5.87□□□□□ -1.47
NUCKS1-202ENST00000464938 POTEMA6NI47 508 aa5.84□□□□□ -1.47
NUCKS1-202ENST00000464938 PELP1Q8IZL8 1130 aaKnown RBP5.83□□□□□ -1.48
NUCKS1-202ENST00000464938 POTEJP0CG39 1038 aa5.81□□□□□ -1.48
NUCKS1-202ENST00000464938 POTEGQ6S5H5 508 aa5.81□□□□□ -1.48
NUCKS1-202ENST00000464938 MNX1P50219 401 aaPredicted RBP5.8□□□□□ -1.48
NUCKS1-202ENST00000464938 LCE2DQ5TA82 110 aaPredicted RBP5.8□□□□□ -1.48
NUCKS1-202ENST00000464938 PHF12Q96QT6 1004 aa5.8□□□□□ -1.48
NUCKS1-202ENST00000464938 ASTLQ6HA08 431 aaPredicted RBP5.77□□□□□ -1.49
NUCKS1-202ENST00000464938 PCDH10Q9P2E7 1040 aa5.75□□□□□ -1.49
NUCKS1-202ENST00000464938 STAG3Q9UJ98 1225 aa5.75□□□□□ -1.49
NUCKS1-202ENST00000464938 ATMINO43313 823 aaPredicted RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms