RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 TTTY13Q9BZ97 58 aa7.34□□□□□ -1.24
SMC6-207ENST00000448223 BOD1L1Q8NFC6 3051 aa7.33□□□□□ -1.24
SMC6-207ENST00000448223 C10orf142B7Z368 130 aa7.33□□□□□ -1.24
SMC6-207ENST00000448223 H0YGX0 51 aa7.33□□□□□ -1.24
SMC6-207ENST00000448223 CHKB-CPT1BH3BT56 60 aa7.33□□□□□ -1.24
SMC6-207ENST00000448223 SS18Q15532 418 aa7.33□□□□□ -1.24
SMC6-207ENST00000448223 SHANK2-AS3Q9BTD1 123 aa7.33□□□□□ -1.24
SMC6-207ENST00000448223 NCOR2Q9Y618 2525 aa7.33□□□□□ -1.24
SMC6-207ENST00000448223 ANKHD1Q8IWZ3 2542 aaKnown RBP7.33□□□□□ -1.24
SMC6-207ENST00000448223 LINC00694P0DN24 101 aa7.33□□□□□ -1.24
SMC6-207ENST00000448223 HTN3P15516 51 aa7.33□□□□□ -1.24
SMC6-207ENST00000448223 PRR30Q53SZ7 412 aaPredicted RBP7.33□□□□□ -1.24
SMC6-207ENST00000448223 OTOGLQ3ZCN5 2332 aa7.33□□□□□ -1.24
SMC6-207ENST00000448223 FAM168AQ92567 244 aa7.33□□□□□ -1.24
SMC6-207ENST00000448223 TRAV23DV6A0A075B6W5 121 aa7.32□□□□□ -1.24
SMC6-207ENST00000448223 LTAP01374 205 aa7.32□□□□□ -1.24
SMC6-207ENST00000448223 COLCA1Q6ZS62 124 aa7.32□□□□□ -1.24
SMC6-207ENST00000448223 VSIG2Q96IQ7 327 aa7.32□□□□□ -1.24
SMC6-207ENST00000448223 STHQ8IWL8 128 aa7.32□□□□□ -1.24
SMC6-207ENST00000448223 C9orf106Q8NAJ2 232 aa7.32□□□□□ -1.24
SMC6-207ENST00000448223 ZNF71Q9NQZ8 489 aaPredicted RBP7.32□□□□□ -1.24
SMC6-207ENST00000448223 COL4A2P08572 1712 aa7.32□□□□□ -1.24
SMC6-207ENST00000448223 MGAQ8IWI9 3026 aa7.32□□□□□ -1.24
SMC6-207ENST00000448223 NXPH4O95158 308 aa7.32□□□□□ -1.24
SMC6-207ENST00000448223 TRIP6Q15654 476 aaKnown RBP7.32□□□□□ -1.24
SMC6-207ENST00000448223 CACNA1AO00555 2505 aa7.32□□□□□ -1.24
SMC6-207ENST00000448223 KLK10O43240 276 aa7.32□□□□□ -1.24
SMC6-207ENST00000448223 FAM120AOSQ5T036 256 aa7.32□□□□□ -1.24
SMC6-207ENST00000448223 Q6ZT83 130 aa7.32□□□□□ -1.24
SMC6-207ENST00000448223 MUC6Q6W4X9 2439 aa7.32□□□□□ -1.24
SMC6-207ENST00000448223 LGALS9O00182 355 aa7.31□□□□□ -1.24
SMC6-207ENST00000448223 TIMM17BO60830 172 aa7.31□□□□□ -1.24
SMC6-207ENST00000448223 LMO1P25800 156 aa7.31□□□□□ -1.24
SMC6-207ENST00000448223 SEC61GP60059 68 aa7.31□□□□□ -1.24
SMC6-207ENST00000448223 GTSF1Q8WW33 167 aa7.31□□□□□ -1.24
SMC6-207ENST00000448223 NEU4Q8WWR8 484 aaPredicted RBP7.31□□□□□ -1.24
SMC6-207ENST00000448223 C14orf132Q9NPU4 83 aa7.31□□□□□ -1.24
SMC6-207ENST00000448223 TCL1BO95988 128 aa7.31□□□□□ -1.24
SMC6-207ENST00000448223 JMJD7-PLA2G4BH0Y9G9 81 aa7.3□□□□□ -1.24
SMC6-207ENST00000448223 FUSP35637 526 aaKnown RBP eCLIP7.3□□□□□ -1.24
SMC6-207ENST00000448223 CD177Q8N6Q3 437 aa7.3□□□□□ -1.24
SMC6-207ENST00000448223 KLHL30-AS1Q8NEE0 82 aa7.3□□□□□ -1.24
SMC6-207ENST00000448223 ATG2AQ2TAZ0 1938 aa7.3□□□□□ -1.24
SMC6-207ENST00000448223 E9PLD3 99 aa7.3□□□□□ -1.24
SMC6-207ENST00000448223 FRMD6-AS1P0C7T7 363 aa7.3□□□□□ -1.24
SMC6-207ENST00000448223 FAM27E3Q08E93 113 aa7.3□□□□□ -1.24
SMC6-207ENST00000448223 Q6ZR03 302 aa7.3□□□□□ -1.24
SMC6-207ENST00000448223 CFHR4Q92496 578 aa7.3□□□□□ -1.24
SMC6-207ENST00000448223 TRGV1A0A0A0MS02 117 aa7.3□□□□□ -1.24
SMC6-207ENST00000448223 ZNF295-AS1Q8N0V1 137 aa7.3□□□□□ -1.24
SMC6-207ENST00000448223 PRR25Q96S07 402 aa7.3□□□□□ -1.24
SMC6-207ENST00000448223 COL5A1P20908 1838 aaPredicted RBP7.3□□□□□ -1.24
SMC6-207ENST00000448223 C15orf32Q32M92 178 aa7.3□□□□□ -1.24
SMC6-207ENST00000448223 ELANEP08246 267 aa7.29□□□□□ -1.24
SMC6-207ENST00000448223 LOXL1Q08397 574 aaPredicted RBP7.29□□□□□ -1.24
SMC6-207ENST00000448223 EXPH5Q8NEV8 1989 aa7.29□□□□□ -1.24
SMC6-207ENST00000448223 DYSFO75923 2080 aa7.29□□□□□ -1.24
SMC6-207ENST00000448223 KRTAP27-1Q3LI81 207 aa7.29□□□□□ -1.24
SMC6-207ENST00000448223 CSPG4Q6UVK1 2322 aa7.29□□□□□ -1.24
SMC6-207ENST00000448223 ATP5EP56381 51 aaPredicted RBP7.29□□□□□ -1.24
SMC6-207ENST00000448223 DYNAPQ8N1N2 210 aa7.29□□□□□ -1.24
SMC6-207ENST00000448223 CLEC2BQ92478 149 aa7.29□□□□□ -1.24
SMC6-207ENST00000448223 TEX49A0A1B0GTD5 131 aa7.29□□□□□ -1.24
SMC6-207ENST00000448223 DAZAP2Q15038 168 aaPredicted RBP7.29□□□□□ -1.24
SMC6-207ENST00000448223 NREPQ16612 68 aa7.29□□□□□ -1.24
SMC6-207ENST00000448223 SHISA2Q6UWI4 295 aa7.28□□□□□ -1.24
SMC6-207ENST00000448223 SERP2Q8N6R1 65 aa7.28□□□□□ -1.24
SMC6-207ENST00000448223 UBE2E2Q96LR5 201 aa7.28□□□□□ -1.24
SMC6-207ENST00000448223 Q9H8V8 135 aa7.28□□□□□ -1.24
SMC6-207ENST00000448223 IGHV3OR16-10A0A075B7F0 116 aa7.28□□□□□ -1.24
SMC6-207ENST00000448223 SMIM26A0A096LP01 95 aa7.28□□□□□ -1.24
SMC6-207ENST00000448223 RHOHQ15669 191 aa7.28□□□□□ -1.24
SMC6-207ENST00000448223 FAM208BQ5VWN6 2430 aa7.28□□□□□ -1.24
SMC6-207ENST00000448223 IGHV3-53P01767 116 aa7.28□□□□□ -1.24
SMC6-207ENST00000448223 COX7CP15954 63 aa7.28□□□□□ -1.24
SMC6-207ENST00000448223 SDIM1Q6ZPB5 146 aa7.28□□□□□ -1.24
SMC6-207ENST00000448223 PRR7Q8TB68 274 aa7.28□□□□□ -1.24
SMC6-207ENST00000448223 B9A039 149 aa7.28□□□□□ -1.24
SMC6-207ENST00000448223 NDUFS5O43920 106 aa7.28□□□□□ -1.24
SMC6-207ENST00000448223 NDUFA11Q86Y39 141 aa7.28□□□□□ -1.24
SMC6-207ENST00000448223 IMUPQ9GZP8 106 aa7.28□□□□□ -1.24
SMC6-207ENST00000448223 PIFOQ8TCI5 191 aa7.27□□□□□ -1.24
SMC6-207ENST00000448223 TRAV4A0A0B4J268 109 aa7.27□□□□□ -1.25
SMC6-207ENST00000448223 IGKV1-16P04430 117 aa7.27□□□□□ -1.25
SMC6-207ENST00000448223 UPK3BQ9BT76 320 aa7.27□□□□□ -1.25
SMC6-207ENST00000448223 IGHV1-69DA0A0B4J2H0 117 aa7.27□□□□□ -1.25
SMC6-207ENST00000448223 LYRM9A8MSI8 78 aa7.27□□□□□ -1.25
SMC6-207ENST00000448223 IGLV2-14P01704 120 aa7.27□□□□□ -1.25
SMC6-207ENST00000448223 XGP55808 180 aa7.27□□□□□ -1.25
SMC6-207ENST00000448223 SPRNQ5BIV9 151 aa7.27□□□□□ -1.25
SMC6-207ENST00000448223 HCFC1P51610 2035 aa7.27□□□□□ -1.25
SMC6-207ENST00000448223 PTPN13Q12923 2485 aa7.27□□□□□ -1.25
SMC6-207ENST00000448223 C2orf70A6NJV1 201 aa7.27□□□□□ -1.25
SMC6-207ENST00000448223 ZNF134P52741 427 aa7.27□□□□□ -1.25
SMC6-207ENST00000448223 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.26□□□□□ -1.25
SMC6-207ENST00000448223 FAM19A5Q7Z5A7 132 aaPredicted RBP7.26□□□□□ -1.25
SMC6-207ENST00000448223 TMEM61Q8N0U2 210 aa7.26□□□□□ -1.25
SMC6-207ENST00000448223 C2CD3Q4AC94 2353 aa7.26□□□□□ -1.25
SMC6-207ENST00000448223 IGKV1D-17A0A075B6S4 117 aa7.26□□□□□ -1.25
SMC6-207ENST00000448223 PROP1O75360 226 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms