RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 RPS20P60866 119 aaKnown RBP5.09□□□□□ -1.59
LSM3P3-201ENST00000436601 FAM159AQ6UWV7 190 aa5.09□□□□□ -1.59
LSM3P3-201ENST00000436601 ZNF705AQ6ZN79 300 aaPredicted RBP5.09□□□□□ -1.59
LSM3P3-201ENST00000436601 LINC01587Q99440 93 aa5.09□□□□□ -1.59
LSM3P3-201ENST00000436601 LINC00467Q9BRT7 94 aa5.09□□□□□ -1.59
LSM3P3-201ENST00000436601 C1QTNF4Q9BXJ3 329 aa5.09□□□□□ -1.59
LSM3P3-201ENST00000436601 KRTAP3-1Q9BYR8 98 aa5.09□□□□□ -1.59
LSM3P3-201ENST00000436601 GFRA4Q9GZZ7 299 aa5.09□□□□□ -1.59
LSM3P3-201ENST00000436601 SMCO4Q9NRQ5 59 aa5.09□□□□□ -1.59
LSM3P3-201ENST00000436601 STAB1Q9NY15 2570 aa5.09□□□□□ -1.6
LSM3P3-201ENST00000436601 IGHV3-16A0A0C4DH30 117 aa5.08□□□□□ -1.6
LSM3P3-201ENST00000436601 FAM231BA6NCW3 169 aa5.08□□□□□ -1.6
LSM3P3-201ENST00000436601 HIGD1CA8MV81 97 aa5.08□□□□□ -1.6
LSM3P3-201ENST00000436601 CXCL1P09341 107 aa5.08□□□□□ -1.6
LSM3P3-201ENST00000436601 FRMD6-AS1P0C7T7 363 aa5.08□□□□□ -1.6
LSM3P3-201ENST00000436601 RNASE3P12724 160 aaKnown RBP5.08□□□□□ -1.6
LSM3P3-201ENST00000436601 AZU1P20160 251 aa5.08□□□□□ -1.6
LSM3P3-201ENST00000436601 APOC4P55056 127 aa5.08□□□□□ -1.6
LSM3P3-201ENST00000436601 ELOBQ15370 118 aa5.08□□□□□ -1.6
LSM3P3-201ENST00000436601 DNLZQ5SXM8 178 aa5.08□□□□□ -1.6
LSM3P3-201ENST00000436601 TMEM256Q8N2U0 113 aa5.08□□□□□ -1.6
LSM3P3-201ENST00000436601 NUP35Q8NFH5 326 aa5.08□□□□□ -1.6
LSM3P3-201ENST00000436601 KCNS1Q96KK3 526 aa5.08□□□□□ -1.6
LSM3P3-201ENST00000436601 PGLYRP4Q96LB8 373 aa5.08□□□□□ -1.6
LSM3P3-201ENST00000436601 PYGO2Q9BRQ0 406 aa5.08□□□□□ -1.6
LSM3P3-201ENST00000436601 MDFICQ9P1T7 246 aa5.08□□□□□ -1.6
LSM3P3-201ENST00000436601 NAT8BQ9UHF3 227 aa5.08□□□□□ -1.6
LSM3P3-201ENST00000436601 GOLT1BQ9Y3E0 138 aa5.08□□□□□ -1.6
LSM3P3-201ENST00000436601 URGCP-MRPS24S4R325 110 aa5.08□□□□□ -1.6
LSM3P3-201ENST00000436601 IGHV3OR16-12A0A075B7B8 117 aa5.07□□□□□ -1.6
LSM3P3-201ENST00000436601 TGIF2-C20orf24A0A0A6YYL0 155 aa5.07□□□□□ -1.6
LSM3P3-201ENST00000436601 MUC21A0A0G2JKD1 596 aa5.07□□□□□ -1.6
LSM3P3-201ENST00000436601 MUC21A0A140T8X8 626 aa5.07□□□□□ -1.6
LSM3P3-201ENST00000436601 XKRY2A2RUG3 117 aa5.07□□□□□ -1.6
LSM3P3-201ENST00000436601 CBY3A6NI87 242 aa5.07□□□□□ -1.6
LSM3P3-201ENST00000436601 COLCA2A8K830 154 aa5.07□□□□□ -1.6
LSM3P3-201ENST00000436601 UBE2CO00762 179 aa5.07□□□□□ -1.6
LSM3P3-201ENST00000436601 SPINK4O60575 86 aa5.07□□□□□ -1.6
LSM3P3-201ENST00000436601 ARMS2P0C7Q2 107 aa5.07□□□□□ -1.6
LSM3P3-201ENST00000436601 HTN1P15515 57 aa5.07□□□□□ -1.6
LSM3P3-201ENST00000436601 S100PP25815 95 aa5.07□□□□□ -1.6
LSM3P3-201ENST00000436601 CTRLP40313 264 aa5.07□□□□□ -1.6
LSM3P3-201ENST00000436601 ASIPP42127 132 aa5.07□□□□□ -1.6
LSM3P3-201ENST00000436601 KCNIP4Q6PIL6 250 aa5.07□□□□□ -1.6
LSM3P3-201ENST00000436601 LYZL1Q6UWQ5 148 aa5.07□□□□□ -1.6
LSM3P3-201ENST00000436601 FER1L6-AS1Q8NA97 138 aa5.07□□□□□ -1.6
LSM3P3-201ENST00000436601 C11orf72Q8NBR9 251 aa5.07□□□□□ -1.6
LSM3P3-201ENST00000436601 TMEM208Q9BTX3 173 aa5.07□□□□□ -1.6
LSM3P3-201ENST00000436601 SCRT2Q9NQ03 307 aa5.07□□□□□ -1.6
LSM3P3-201ENST00000436601 TRBV24-1A0A075B6N3 115 aa5.06□□□□□ -1.6
LSM3P3-201ENST00000436601 TRAV9-1A0A075B6T8 112 aa5.06□□□□□ -1.6
LSM3P3-201ENST00000436601 A0A1W2PPQ1 181 aa5.06□□□□□ -1.6
LSM3P3-201ENST00000436601 H3BVH4 76 aa5.06□□□□□ -1.6
LSM3P3-201ENST00000436601 SNAI2O43623 268 aa5.06□□□□□ -1.6
LSM3P3-201ENST00000436601 OR5AL1P0C617 328 aa5.06□□□□□ -1.6
LSM3P3-201ENST00000436601 FOXI1Q12951 378 aa5.06□□□□□ -1.6
LSM3P3-201ENST00000436601 DEFB135Q30KP9 77 aa5.06□□□□□ -1.6
LSM3P3-201ENST00000436601 OR10AG1Q8NH19 301 aa5.06□□□□□ -1.6
LSM3P3-201ENST00000436601 RNASE8Q8TDE3 154 aaKnown RBP5.06□□□□□ -1.6
LSM3P3-201ENST00000436601 RNF183Q96D59 192 aa5.06□□□□□ -1.6
LSM3P3-201ENST00000436601 BTF3L4Q96K17 158 aa5.06□□□□□ -1.6
LSM3P3-201ENST00000436601 C9orf85Q96MD7 179 aa5.06□□□□□ -1.6
LSM3P3-201ENST00000436601 TPPP3Q9BW30 176 aa5.06□□□□□ -1.6
LSM3P3-201ENST00000436601 GSN-AS1Q9NRJ2 163 aa5.06□□□□□ -1.6
LSM3P3-201ENST00000436601 TIMM8BQ9Y5J9 83 aaPredicted RBP5.06□□□□□ -1.6
LSM3P3-201ENST00000436601 IGHV4-4A0A075B6R2 117 aa5.05□□□□□ -1.6
LSM3P3-201ENST00000436601 A0A1B0GXF2 115 aa5.05□□□□□ -1.6
LSM3P3-201ENST00000436601 PLAC8L1A1L4L8 177 aa5.05□□□□□ -1.6
LSM3P3-201ENST00000436601 F2Z2F3 143 aa5.05□□□□□ -1.6
LSM3P3-201ENST00000436601 S100A4P26447 101 aaKnown RBP5.05□□□□□ -1.6
LSM3P3-201ENST00000436601 SSTP61278 116 aa5.05□□□□□ -1.6
LSM3P3-201ENST00000436601 DEFB121Q5J5C9 76 aa5.05□□□□□ -1.6
LSM3P3-201ENST00000436601 XP32Q5T750 250 aa5.05□□□□□ -1.6
LSM3P3-201ENST00000436601 MRPL54Q6P161 138 aaKnown RBP5.05□□□□□ -1.6
LSM3P3-201ENST00000436601 FAM210BQ96KR6 192 aa5.05□□□□□ -1.6
LSM3P3-201ENST00000436601 RCHY1Q96PM5 261 aa5.05□□□□□ -1.6
LSM3P3-201ENST00000436601 OVOL2Q9BRP0 275 aa5.05□□□□□ -1.6
LSM3P3-201ENST00000436601 CNFNQ9BYD5 112 aa5.05□□□□□ -1.6
LSM3P3-201ENST00000436601 MSRB1Q9NZV6 116 aa5.05□□□□□ -1.6
LSM3P3-201ENST00000436601 A0A1B0GUT8 65 aa5.04□□□□□ -1.6
LSM3P3-201ENST00000436601 SMIM9A6NGZ8 99 aa5.04□□□□□ -1.6
LSM3P3-201ENST00000436601 NXPH4O95158 308 aa5.04□□□□□ -1.6
LSM3P3-201ENST00000436601 NTF3P20783 257 aa5.04□□□□□ -1.6
LSM3P3-201ENST00000436601 ZNF415Q09FC8 603 aa5.04□□□□□ -1.6
LSM3P3-201ENST00000436601 RRN3P1Q2M238 152 aa5.04□□□□□ -1.6
LSM3P3-201ENST00000436601 WDR73Q6P4I2 378 aa5.04□□□□□ -1.6
LSM3P3-201ENST00000436601 ZNF493Q6ZR52 646 aa5.04□□□□□ -1.6
LSM3P3-201ENST00000436601 SBSPONQ8IVN8 264 aa5.04□□□□□ -1.6
LSM3P3-201ENST00000436601 OR11H2Q8NH07 326 aa5.04□□□□□ -1.6
LSM3P3-201ENST00000436601 TMEM263Q8WUH6 116 aaKnown RBP5.04□□□□□ -1.6
LSM3P3-201ENST00000436601 RETNQ9HD89 108 aa5.04□□□□□ -1.6
LSM3P3-201ENST00000436601 M0R381 172 aa5.03□□□□□ -1.6
LSM3P3-201ENST00000436601 RAB5AP20339 215 aa5.03□□□□□ -1.6
LSM3P3-201ENST00000436601 CAMPP49913 170 aa5.03□□□□□ -1.6
LSM3P3-201ENST00000436601 CACNG7P62955 275 aa5.03□□□□□ -1.6
LSM3P3-201ENST00000436601 HBBP68871 147 aa5.03□□□□□ -1.6
LSM3P3-201ENST00000436601 RIGQ13278 110 aa5.03□□□□□ -1.6
LSM3P3-201ENST00000436601 TWIST1Q15672 202 aa5.03□□□□□ -1.6
LSM3P3-201ENST00000436601 SPANXN1Q5VSR9 72 aa5.03□□□□□ -1.6
LSM3P3-201ENST00000436601 TMEM136Q6ZRR5 245 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms