RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 MEGF8Q7Z7M0 2845 aa10.26□□□□□ -0.77
SF3B1-204ENST00000414963 IGHV4-4A0A075B6R2 117 aa10.26□□□□□ -0.77
SF3B1-204ENST00000414963 PLAC8L1A1L4L8 177 aa10.26□□□□□ -0.77
SF3B1-204ENST00000414963 H3BVH4 76 aa10.26□□□□□ -0.77
SF3B1-204ENST00000414963 MIFP14174 115 aa10.26□□□□□ -0.77
SF3B1-204ENST00000414963 FAM3BP58499 235 aaPredicted RBP10.26□□□□□ -0.77
SF3B1-204ENST00000414963 DAZ2Q13117 558 aaKnown RBP10.26□□□□□ -0.77
SF3B1-204ENST00000414963 PGLYRP4Q96LB8 373 aa10.26□□□□□ -0.77
SF3B1-204ENST00000414963 A0A1B0GUT8 65 aa10.25□□□□□ -0.77
SF3B1-204ENST00000414963 NXPH4O95158 308 aa10.25□□□□□ -0.77
SF3B1-204ENST00000414963 CACNG7P62955 275 aa10.25□□□□□ -0.77
SF3B1-204ENST00000414963 ELOBQ15370 118 aa10.25□□□□□ -0.77
SF3B1-204ENST00000414963 PIK3CD-AS1Q5SR53 167 aa10.25□□□□□ -0.77
SF3B1-204ENST00000414963 TMEM88Q6PEY1 159 aa10.25□□□□□ -0.77
SF3B1-204ENST00000414963 CBLN2Q8IUK8 224 aa10.25□□□□□ -0.77
SF3B1-204ENST00000414963 BTF3L4Q96K17 158 aa10.25□□□□□ -0.77
SF3B1-204ENST00000414963 B9D2Q9BPU9 175 aa10.25□□□□□ -0.77
SF3B1-204ENST00000414963 GSN-AS1Q9NRJ2 163 aa10.25□□□□□ -0.77
SF3B1-204ENST00000414963 TRBV24-1A0A075B6N3 115 aa10.24□□□□□ -0.77
SF3B1-204ENST00000414963 SCO1O75880 301 aa10.24□□□□□ -0.77
SF3B1-204ENST00000414963 Q8NAQ8 132 aa10.24□□□□□ -0.77
SF3B1-204ENST00000414963 SPATA25Q9BR10 227 aa10.24□□□□□ -0.77
SF3B1-204ENST00000414963 TPPP3Q9BW30 176 aa10.24□□□□□ -0.77
SF3B1-204ENST00000414963 PHLDA3Q9Y5J5 127 aa10.24□□□□□ -0.77
SF3B1-204ENST00000414963 URGCP-MRPS24S4R325 110 aa10.24□□□□□ -0.77
SF3B1-204ENST00000414963 IGHV4-28A0A0C4DH34 117 aa10.23□□□□□ -0.77
SF3B1-204ENST00000414963 A0A1B0GW15 77 aa10.23□□□□□ -0.77
SF3B1-204ENST00000414963 M0R2P5 195 aa10.23□□□□□ -0.77
SF3B1-204ENST00000414963 DEFA6Q01524 100 aa10.23□□□□□ -0.77
SF3B1-204ENST00000414963 RIGQ13278 110 aa10.23□□□□□ -0.77
SF3B1-204ENST00000414963 LGALS9BQ3B8N2 356 aa10.23□□□□□ -0.77
SF3B1-204ENST00000414963 ATP5L2Q7Z4Y8 100 aa10.23□□□□□ -0.77
SF3B1-204ENST00000414963 OR10AG1Q8NH19 301 aa10.23□□□□□ -0.77
SF3B1-204ENST00000414963 BORCS7Q96B45 105 aa10.23□□□□□ -0.77
SF3B1-204ENST00000414963 NDUFAF3Q9BU61 184 aa10.23□□□□□ -0.77
SF3B1-204ENST00000414963 TIMM8BQ9Y5J9 83 aaPredicted RBP10.23□□□□□ -0.77
SF3B1-204ENST00000414963 A0A1B0GXF2 115 aa10.22□□□□□ -0.77
SF3B1-204ENST00000414963 SNURFLB1AK76 121 aa10.22□□□□□ -0.77
SF3B1-204ENST00000414963 SPINK4O60575 86 aa10.22□□□□□ -0.77
SF3B1-204ENST00000414963 NTF3P20783 257 aa10.22□□□□□ -0.77
SF3B1-204ENST00000414963 DMRTA1Q5VZB9 504 aa10.22□□□□□ -0.77
SF3B1-204ENST00000414963 RASL11AQ6T310 242 aa10.22□□□□□ -0.77
SF3B1-204ENST00000414963 ZFP82Q8N141 532 aa10.22□□□□□ -0.77
SF3B1-204ENST00000414963 SYT8Q8NBV8 401 aa10.22□□□□□ -0.77
SF3B1-204ENST00000414963 RASL10AQ92737 203 aa10.22□□□□□ -0.77
SF3B1-204ENST00000414963 RETNQ9HD89 108 aa10.22□□□□□ -0.77
SF3B1-204ENST00000414963 SPANXN1Q5VSR9 72 aa10.21□□□□□ -0.77
SF3B1-204ENST00000414963 TGIF2-C20orf24A0A0A6YYL0 155 aa10.2□□□□□ -0.78
SF3B1-204ENST00000414963 MUC21A0A0G2JKD1 596 aa10.2□□□□□ -0.78
SF3B1-204ENST00000414963 MUC21A0A140T8X8 626 aa10.2□□□□□ -0.78
SF3B1-204ENST00000414963 COLCA2A8K830 154 aa10.2□□□□□ -0.78
SF3B1-204ENST00000414963 HBBP68871 147 aa10.2□□□□□ -0.78
SF3B1-204ENST00000414963 TWIST1Q15672 202 aa10.2□□□□□ -0.78
SF3B1-204ENST00000414963 ZNF876PQ49A33 203 aa10.2□□□□□ -0.78
SF3B1-204ENST00000414963 LINC00612Q8N6U2 182 aa10.2□□□□□ -0.78
SF3B1-204ENST00000414963 GATD1Q8NB37 220 aa10.2□□□□□ -0.78
SF3B1-204ENST00000414963 C11orf68Q9H3H3 251 aaKnown RBP10.2□□□□□ -0.78
SF3B1-204ENST00000414963 NOP10Q9NPE3 64 aaKnown RBP10.2□□□□□ -0.78
SF3B1-204ENST00000414963 LYRM9A8MSI8 78 aa10.19□□□□□ -0.78
SF3B1-204ENST00000414963 M0R381 172 aa10.19□□□□□ -0.78
SF3B1-204ENST00000414963 S100A8P05109 93 aa10.19□□□□□ -0.78
SF3B1-204ENST00000414963 NHLRC4P0CG21 123 aaPredicted RBP10.19□□□□□ -0.78
SF3B1-204ENST00000414963 COX19Q49B96 90 aa10.19□□□□□ -0.78
SF3B1-204ENST00000414963 MRPL54Q6P161 138 aaKnown RBP10.19□□□□□ -0.78
SF3B1-204ENST00000414963 FAM210BQ96KR6 192 aa10.19□□□□□ -0.78
SF3B1-204ENST00000414963 ZMAT4Q9H898 229 aa10.19□□□□□ -0.78
SF3B1-204ENST00000414963 MSRB1Q9NZV6 116 aa10.19□□□□□ -0.78
SF3B1-204ENST00000414963 MUC4Q99102 2169 aa10.18□□□□□ -0.78
SF3B1-204ENST00000414963 C18orf15Q96N68 181 aa10.18□□□□□ -0.78
SF3B1-204ENST00000414963 A8MWV9 139 aa10.17□□□□□ -0.78
SF3B1-204ENST00000414963 TRGC1P0CF51 173 aa10.17□□□□□ -0.78
SF3B1-204ENST00000414963 EMP1P54849 157 aa10.17□□□□□ -0.78
SF3B1-204ENST00000414963 SSTP61278 116 aa10.17□□□□□ -0.78
SF3B1-204ENST00000414963 Q6ZTI0 123 aa10.17□□□□□ -0.78
SF3B1-204ENST00000414963 GNB1LQ9BYB4 327 aa10.17□□□□□ -0.78
SF3B1-204ENST00000414963 TMEM191AQ9H0A3 160 aa10.17□□□□□ -0.78
SF3B1-204ENST00000414963 MRPL16Q9NX20 251 aaKnown RBP10.17□□□□□ -0.78
SF3B1-204ENST00000414963 DKK2Q9UBU2 259 aa10.17□□□□□ -0.78
SF3B1-204ENST00000414963 TENM3Q9P273 2699 aa10.16□□□□□ -0.78
SF3B1-204ENST00000414963 TRGV1A0A0A0MS02 117 aa10.16□□□□□ -0.78
SF3B1-204ENST00000414963 TEX48A0A1B0GUV7 120 aa10.16□□□□□ -0.78
SF3B1-204ENST00000414963 SPART-AS1P0CW21 52 aa10.16□□□□□ -0.78
SF3B1-204ENST00000414963 CAMPP49913 170 aa10.16□□□□□ -0.78
SF3B1-204ENST00000414963 AP1S3Q96PC3 154 aa10.16□□□□□ -0.78
SF3B1-204ENST00000414963 KIF25-AS1Q9Y6Z4 181 aa10.16□□□□□ -0.78
SF3B1-204ENST00000414963 DEFB4AO15263 64 aa10.15□□□□□ -0.78
SF3B1-204ENST00000414963 RS1O15537 224 aa10.15□□□□□ -0.78
SF3B1-204ENST00000414963 CRYGDP07320 174 aa10.15□□□□□ -0.78
SF3B1-204ENST00000414963 EVI2AP22794 236 aa10.15□□□□□ -0.78
SF3B1-204ENST00000414963 FAM222AQ5U5X8 452 aa10.15□□□□□ -0.78
SF3B1-204ENST00000414963 TMEM136Q6ZRR5 245 aa10.15□□□□□ -0.78
SF3B1-204ENST00000414963 SMIM15Q7Z3B0 74 aa10.15□□□□□ -0.78
SF3B1-204ENST00000414963 CIDEAO60543 219 aa10.14□□□□□ -0.79
SF3B1-204ENST00000414963 MT-ND6P03923 174 aa10.14□□□□□ -0.79
SF3B1-204ENST00000414963 RAB5AP20339 215 aa10.14□□□□□ -0.79
SF3B1-204ENST00000414963 LINC00315P59091 139 aa10.14□□□□□ -0.79
SF3B1-204ENST00000414963 CFAP126Q5VTH2 177 aa10.14□□□□□ -0.79
SF3B1-204ENST00000414963 UFSP1Q6NVU6 142 aa10.14□□□□□ -0.79
SF3B1-204ENST00000414963 ZFP2Q6ZN57 461 aa10.14□□□□□ -0.79
SF3B1-204ENST00000414963 C14orf178Q8N769 122 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms