RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 MUC4Q99102 2169 aa11.05□□□□□ -0.64
SEMA3F-202ENST00000413852 SRSF2Q01130 221 aaKnown RBP11.05□□□□□ -0.64
SEMA3F-202ENST00000413852 NEXN-AS1Q8NBZ9 246 aa11.05□□□□□ -0.64
SEMA3F-202ENST00000413852 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.05□□□□□ -0.642e-6■■□□□ 12.9
SEMA3F-202ENST00000413852 A0A087WWL8 130 aa11.05□□□□□ -0.64
SEMA3F-202ENST00000413852 PLNP26678 52 aa11.05□□□□□ -0.64
SEMA3F-202ENST00000413852 GPHB5Q86YW7 130 aa11.04□□□□□ -0.64
SEMA3F-202ENST00000413852 OPRPNQ99935 248 aaPredicted RBP11.04□□□□□ -0.64
SEMA3F-202ENST00000413852 SLC50A1Q9BRV3 221 aa11.04□□□□□ -0.64
SEMA3F-202ENST00000413852 UBTD1Q9HAC8 227 aa11.04□□□□□ -0.64
SEMA3F-202ENST00000413852 PHLDA3Q9Y5J5 127 aa11.04□□□□□ -0.64
SEMA3F-202ENST00000413852 BRD3OSQ6XYD6 125 aa11.04□□□□□ -0.64
SEMA3F-202ENST00000413852 IGHV3-64A0A075B6Q5 118 aa11.03□□□□□ -0.64
SEMA3F-202ENST00000413852 ZFAND2AQ8N6M9 145 aa11.03□□□□□ -0.64
SEMA3F-202ENST00000413852 SYT8Q8NBV8 401 aa11.03□□□□□ -0.64
SEMA3F-202ENST00000413852 SPOCK3Q9BQ16 436 aa11.03□□□□□ -0.64
SEMA3F-202ENST00000413852 C11orf86A6NJI1 115 aa11.03□□□□□ -0.64
SEMA3F-202ENST00000413852 NDUFS8O00217 210 aa11.03□□□□□ -0.64
SEMA3F-202ENST00000413852 TSPEAR-AS2P59090 65 aa11.03□□□□□ -0.64
SEMA3F-202ENST00000413852 TOMM6Q96B49 74 aa11.03□□□□□ -0.64
SEMA3F-202ENST00000413852 HIVEP3Q5T1R4 2406 aa11.03□□□□□ -0.64
SEMA3F-202ENST00000413852 DOPEY2Q9Y3R5 2298 aa11.02□□□□□ -0.64
SEMA3F-202ENST00000413852 RBAKDNA6NC62 111 aa11.02□□□□□ -0.64
SEMA3F-202ENST00000413852 SCGB2A1O75556 95 aa11.02□□□□□ -0.64
SEMA3F-202ENST00000413852 CRYGDP07320 174 aa11.02□□□□□ -0.64
SEMA3F-202ENST00000413852 C9orf47Q6ZRZ4 202 aa11.02□□□□□ -0.64
SEMA3F-202ENST00000413852 SIRPDQ9H106 197 aa11.02□□□□□ -0.64
SEMA3F-202ENST00000413852 UTP20O75691 2785 aaKnown RBP11.02□□□□□ -0.65
SEMA3F-202ENST00000413852 TSPAN13O95857 204 aa11.02□□□□□ -0.65
SEMA3F-202ENST00000413852 TSHBP01222 138 aa11.02□□□□□ -0.65
SEMA3F-202ENST00000413852 IGKV3-20P01619 116 aa11.02□□□□□ -0.65
SEMA3F-202ENST00000413852 RAB9AP51151 201 aa11.02□□□□□ -0.65
SEMA3F-202ENST00000413852 ADORA2A-AS1P86434 159 aa11.02□□□□□ -0.65
SEMA3F-202ENST00000413852 EBI3Q14213 229 aa11.02□□□□□ -0.65
SEMA3F-202ENST00000413852 LY6EQ16553 131 aa11.02□□□□□ -0.65
SEMA3F-202ENST00000413852 H7C2G1 150 aa11.01□□□□□ -0.65
SEMA3F-202ENST00000413852 CIDEAO60543 219 aa11.01□□□□□ -0.65
SEMA3F-202ENST00000413852 TCF15Q12870 199 aa11.01□□□□□ -0.65
SEMA3F-202ENST00000413852 EEF1AKMT3Q96AZ1 226 aa11.01□□□□□ -0.65
SEMA3F-202ENST00000413852 MT-ATP8P03928 68 aa11.01□□□□□ -0.65
SEMA3F-202ENST00000413852 KIR2DL4Q99706 377 aa11.01□□□□□ -0.65
SEMA3F-202ENST00000413852 TP53TG1Q9Y2A0 90 aa11□□□□□ -0.65
SEMA3F-202ENST00000413852 CSPG4Q6UVK1 2322 aa11□□□□□ -0.65
SEMA3F-202ENST00000413852 C11orf71Q6IPW1 123 aa11□□□□□ -0.65
SEMA3F-202ENST00000413852 CREBBPQ92793 2442 aa11□□□□□ -0.65
SEMA3F-202ENST00000413852 FAM74A4Q5TZK3 123 aa10.99□□□□□ -0.65
SEMA3F-202ENST00000413852 SPTBN4Q9H254 2564 aa10.99□□□□□ -0.65
SEMA3F-202ENST00000413852 F5H697 171 aa10.99□□□□□ -0.65
SEMA3F-202ENST00000413852 RNASE3P12724 160 aaKnown RBP10.99□□□□□ -0.65
SEMA3F-202ENST00000413852 SPATA25Q9BR10 227 aa10.99□□□□□ -0.65
SEMA3F-202ENST00000413852 BPESC1Q9GZL8 116 aa10.99□□□□□ -0.65
SEMA3F-202ENST00000413852 CENPVL3A0A0U1RRI6 287 aa10.99□□□□□ -0.65
SEMA3F-202ENST00000413852 ASIPP42127 132 aa10.99□□□□□ -0.65
SEMA3F-202ENST00000413852 CKS1BP61024 79 aa10.99□□□□□ -0.65
SEMA3F-202ENST00000413852 TMEM170BQ5T4T1 132 aa10.99□□□□□ -0.65
SEMA3F-202ENST00000413852 ATP6V0BQ99437 205 aa10.99□□□□□ -0.65
SEMA3F-202ENST00000413852 DPH3P1Q9H4G8 78 aa10.99□□□□□ -0.65
SEMA3F-202ENST00000413852 FOXI1Q12951 378 aa10.98□□□□□ -0.65
SEMA3F-202ENST00000413852 TAL2Q16559 108 aa10.98□□□□□ -0.65
SEMA3F-202ENST00000413852 ORMDL2Q53FV1 153 aa10.98□□□□□ -0.65
SEMA3F-202ENST00000413852 MRAP2Q96G30 205 aa10.98□□□□□ -0.65
SEMA3F-202ENST00000413852 RAX2Q96IS3 184 aa10.98□□□□□ -0.65
SEMA3F-202ENST00000413852 CDIP1Q9H305 208 aa10.98□□□□□ -0.65
SEMA3F-202ENST00000413852 ZNF580Q9UK33 172 aa10.98□□□□□ -0.65
SEMA3F-202ENST00000413852 ABCA2Q9BZC7 2435 aa10.98□□□□□ -0.65
SEMA3F-202ENST00000413852 ITLN2Q8WWU7 325 aaPredicted RBP10.98□□□□□ -0.65
SEMA3F-202ENST00000413852 CARD19Q96LW7 228 aa10.98□□□□□ -0.65
SEMA3F-202ENST00000413852 ZNF256Q9Y2P7 627 aaPredicted RBP10.98□□□□□ -0.65
SEMA3F-202ENST00000413852 IGHV4-4A0A075B6R2 117 aa10.97□□□□□ -0.65
SEMA3F-202ENST00000413852 TRAV12-1A0A0B4J245 112 aa10.97□□□□□ -0.65
SEMA3F-202ENST00000413852 PRSS47A8MTI9 375 aa10.97□□□□□ -0.65
SEMA3F-202ENST00000413852 CFAP126Q5VTH2 177 aa10.97□□□□□ -0.65
SEMA3F-202ENST00000413852 TMEM190Q8WZ59 177 aa10.97□□□□□ -0.65
SEMA3F-202ENST00000413852 LINC00477Q96M19 166 aa10.97□□□□□ -0.65
SEMA3F-202ENST00000413852 IGLV4-69A0A075B6H9 119 aa10.97□□□□□ -0.65
SEMA3F-202ENST00000413852 J3QR89 54 aa10.97□□□□□ -0.65
SEMA3F-202ENST00000413852 TCL1BO95988 128 aa10.97□□□□□ -0.65
SEMA3F-202ENST00000413852 COX6B1P14854 86 aa10.97□□□□□ -0.65
SEMA3F-202ENST00000413852 MINOS1Q5TGZ0 78 aa10.97□□□□□ -0.65
SEMA3F-202ENST00000413852 C5orf56Q8N8D9 126 aa10.97□□□□□ -0.65
SEMA3F-202ENST00000413852 OR10J6PQ8NGY7 276 aa10.97□□□□□ -0.65
SEMA3F-202ENST00000413852 MINOS1-NBL1R4GNA1 71 aa10.97□□□□□ -0.65
SEMA3F-202ENST00000413852 U3KQE9 123 aa10.97□□□□□ -0.65
SEMA3F-202ENST00000413852 ZANQ9Y493 2812 aa10.96□□□□□ -0.65
SEMA3F-202ENST00000413852 TRAV12-2A0A075B6T6 113 aa10.96□□□□□ -0.66
SEMA3F-202ENST00000413852 TRAV26-1A0A087WT03 109 aa10.96□□□□□ -0.66
SEMA3F-202ENST00000413852 TRAV41A0A0B4J266 112 aa10.96□□□□□ -0.66
SEMA3F-202ENST00000413852 CRIP2P52943 208 aaPredicted RBP10.96□□□□□ -0.66
SEMA3F-202ENST00000413852 XGP55808 180 aa10.96□□□□□ -0.66
SEMA3F-202ENST00000413852 ZNRF2Q8NHG8 242 aa10.96□□□□□ -0.66
SEMA3F-202ENST00000413852 TRAV12-3A0A0B4J271 114 aa10.95□□□□□ -0.66
SEMA3F-202ENST00000413852 TRAV21A0A0B4J279 112 aa10.95□□□□□ -0.66
SEMA3F-202ENST00000413852 ADARB2-AS1A8MUL3 147 aa10.95□□□□□ -0.66
SEMA3F-202ENST00000413852 DLX4Q92988 240 aaPredicted RBP10.95□□□□□ -0.66
SEMA3F-202ENST00000413852 GATA3P23771 443 aa10.95□□□□□ -0.66
SEMA3F-202ENST00000413852 UBE2E1P51965 193 aa10.95□□□□□ -0.66
SEMA3F-202ENST00000413852 C1QTNF4Q9BXJ3 329 aa10.95□□□□□ -0.66
SEMA3F-202ENST00000413852 TRBV7-1A0A0A6YYK4 115 aa10.94□□□□□ -0.66
SEMA3F-202ENST00000413852 A0A0J9YY99 117 aa10.94□□□□□ -0.66
SEMA3F-202ENST00000413852 NPFFO15130 113 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms