RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 MDFICQ9P1T7 246 aa8.84□□□□□ -0.99
ITSN1-211ENST00000399355 COX8AP10176 69 aa8.83□□□□□ -1
ITSN1-211ENST00000399355 PSMG4Q5JS54 123 aa8.83□□□□□ -1
ITSN1-211ENST00000399355 NRACQ8N912 160 aa8.83□□□□□ -1
ITSN1-211ENST00000399355 MAP1LC3AQ9H492 121 aa8.83□□□□□ -1
ITSN1-211ENST00000399355 NBEAL1Q6ZS30 2694 aa8.83□□□□□ -1
ITSN1-211ENST00000399355 IGHV3-64A0A075B6Q5 118 aa8.83□□□□□ -1
ITSN1-211ENST00000399355 KNCNA6PVL3 124 aa8.83□□□□□ -1
ITSN1-211ENST00000399355 MSMBP08118 114 aa8.83□□□□□ -1
ITSN1-211ENST00000399355 PROK1P58294 105 aa8.83□□□□□ -1
ITSN1-211ENST00000399355 P0DMU3 169 aa8.83□□□□□ -1
ITSN1-211ENST00000399355 FAM231AP0DMU4 169 aa8.83□□□□□ -1
ITSN1-211ENST00000399355 FAM231CP0DMU5 169 aa8.83□□□□□ -1
ITSN1-211ENST00000399355 RAB9AP51151 201 aa8.83□□□□□ -1
ITSN1-211ENST00000399355 ODF1Q14990 250 aa8.83□□□□□ -1
ITSN1-211ENST00000399355 RNASE13Q5GAN3 156 aaKnown RBP8.83□□□□□ -1
ITSN1-211ENST00000399355 CR1P17927 2039 aa8.83□□□□□ -1
ITSN1-211ENST00000399355 PIMREGQ9BSJ6 248 aa8.83□□□□□ -1
ITSN1-211ENST00000399355 HHLA3Q9XRX5 114 aa8.83□□□□□ -1
ITSN1-211ENST00000399355 UBE2V1Q13404 147 aa8.82□□□□□ -1
ITSN1-211ENST00000399355 KLHL30-AS1Q8NEE0 82 aa8.82□□□□□ -1
ITSN1-211ENST00000399355 NPFFR1Q9GZQ6 430 aa8.82□□□□□ -1
ITSN1-211ENST00000399355 CBY1Q9Y3M2 126 aa8.82□□□□□ -1
ITSN1-211ENST00000399355 U3KQK5 164 aa8.82□□□□□ -1
ITSN1-211ENST00000399355 PHLDA3Q9Y5J5 127 aa8.82□□□□□ -1
ITSN1-211ENST00000399355 F5H697 171 aa8.81□□□□□ -1
ITSN1-211ENST00000399355 GATD1Q8NB37 220 aa8.81□□□□□ -1
ITSN1-211ENST00000399355 ZNF48Q96MX3 618 aaPredicted RBP8.81□□□□□ -1
ITSN1-211ENST00000399355 RNASE3P12724 160 aaKnown RBP8.81□□□□□ -1
ITSN1-211ENST00000399355 LINC01559Q495D7 138 aa8.81□□□□□ -1
ITSN1-211ENST00000399355 TMEM97Q5BJF2 176 aa8.81□□□□□ -1
ITSN1-211ENST00000399355 RASL10AQ92737 203 aa8.81□□□□□ -1
ITSN1-211ENST00000399355 ZNF256Q9Y2P7 627 aaPredicted RBP8.81□□□□□ -1
ITSN1-211ENST00000399355 AMTNQ6UX39 209 aa8.81□□□□□ -1
ITSN1-211ENST00000399355 A0A1W2PRX2 142 aa8.8□□□□□ -1
ITSN1-211ENST00000399355 ZNF580Q9UK33 172 aa8.8□□□□□ -1
ITSN1-211ENST00000399355 IGLV2-18A0A075B6J9 118 aa8.8□□□□□ -1
ITSN1-211ENST00000399355 TRBV7-1A0A0A6YYK4 115 aa8.8□□□□□ -1
ITSN1-211ENST00000399355 PRSS29PA6NIE9 313 aa8.8□□□□□ -1
ITSN1-211ENST00000399355 CD7P09564 240 aa8.8□□□□□ -1
ITSN1-211ENST00000399355 DEFB125Q8N687 156 aa8.8□□□□□ -1
ITSN1-211ENST00000399355 TMEM190Q8WZ59 177 aa8.8□□□□□ -1
ITSN1-211ENST00000399355 TRBV6-1A0A0K0K1D8 114 aa8.79□□□□□ -1
ITSN1-211ENST00000399355 DUSP14O95147 198 aaKnown RBP8.79□□□□□ -1
ITSN1-211ENST00000399355 AP1S3Q96PC3 154 aa8.79□□□□□ -1
ITSN1-211ENST00000399355 SLURP1P55000 103 aa8.79□□□□□ -1
ITSN1-211ENST00000399355 C19orf54Q5BKX5 351 aa8.79□□□□□ -1
ITSN1-211ENST00000399355 NHP2Q9NX24 153 aaKnown RBP8.79□□□□□ -1
ITSN1-211ENST00000399355 NOTCH1P46531 2555 aa8.79□□□□□ -1
ITSN1-211ENST00000399355 OOSP1A8MZH6 123 aa8.79□□□□□ -1
ITSN1-211ENST00000399355 CEMP1Q6PRD7 247 aaPredicted RBP8.79□□□□□ -1
ITSN1-211ENST00000399355 Q5PR19 223 aa8.78□□□□□ -1
ITSN1-211ENST00000399355 Q6AWC8 147 aa8.78□□□□□ -1
ITSN1-211ENST00000399355 U3KQE9 123 aa8.78□□□□□ -1
ITSN1-211ENST00000399355 SOCS3O14543 225 aa8.78□□□□□ -1
ITSN1-211ENST00000399355 COTL1Q14019 142 aa8.78□□□□□ -1
ITSN1-211ENST00000399355 OR10J6PQ8NGY7 276 aa8.78□□□□□ -1
ITSN1-211ENST00000399355 IGHV4OR15-8A0A075B7B6 117 aa8.78□□□□□ -1
ITSN1-211ENST00000399355 A0A087WW49 117 aa8.78□□□□□ -1
ITSN1-211ENST00000399355 RIPPLY3P57055 190 aa8.78□□□□□ -1
ITSN1-211ENST00000399355 A6NDX4 124 aa8.77□□□□□ -1
ITSN1-211ENST00000399355 HOXA3O43365 443 aaPredicted RBP8.77□□□□□ -1
ITSN1-211ENST00000399355 IGHG2P01859 326 aa8.77□□□□□ -1
ITSN1-211ENST00000399355 CD300EQ496F6 205 aaPredicted RBP8.77□□□□□ -1
ITSN1-211ENST00000399355 DPF1Q92782 380 aa8.77□□□□□ -1
ITSN1-211ENST00000399355 SLC50A1Q9BRV3 221 aa8.77□□□□□ -1
ITSN1-211ENST00000399355 STAB1Q9NY15 2570 aa8.77□□□□□ -1.01
ITSN1-211ENST00000399355 ADAMTSL5Q6ZMM2 481 aa8.77□□□□□ -1.01
ITSN1-211ENST00000399355 ORAOV1Q8WV07 137 aa8.77□□□□□ -1.01
ITSN1-211ENST00000399355 RBX1P62877 108 aa8.77□□□□□ -1.01
ITSN1-211ENST00000399355 C9orf47Q6ZRZ4 202 aa8.77□□□□□ -1.01
ITSN1-211ENST00000399355 APRG1Q8IVJ8 170 aa8.77□□□□□ -1.01
ITSN1-211ENST00000399355 ARL6IP6Q8N6S5 226 aa8.77□□□□□ -1.01
ITSN1-211ENST00000399355 TRBV25-1A0A075B6N4 114 aa8.77□□□□□ -1.01
ITSN1-211ENST00000399355 RBMY1A1P0DJD3 496 aaKnown RBP8.77□□□□□ -1.01
ITSN1-211ENST00000399355 RBMY1CP0DJD4 496 aa8.77□□□□□ -1.01
ITSN1-211ENST00000399355 GAGE1Q13065 139 aa8.77□□□□□ -1.01
ITSN1-211ENST00000399355 RBMY1FQ15415 496 aaKnown RBP8.77□□□□□ -1.01
ITSN1-211ENST00000399355 MS4A6AQ9H2W1 248 aa8.77□□□□□ -1.01
ITSN1-211ENST00000399355 BOD1L2Q8IYS8 172 aa8.76□□□□□ -1.01
ITSN1-211ENST00000399355 CSTL1Q9H114 145 aa8.76□□□□□ -1.01
ITSN1-211ENST00000399355 CYSLTR1Q9Y271 337 aa8.76□□□□□ -1.01
ITSN1-211ENST00000399355 GAGE12BA1L429 117 aa8.76□□□□□ -1.01
ITSN1-211ENST00000399355 ADARB2-AS1A8MUL3 147 aa8.76□□□□□ -1.01
ITSN1-211ENST00000399355 IGHV3OR16-12A0A075B7B8 117 aa8.75□□□□□ -1.01
ITSN1-211ENST00000399355 IGKCP01834 107 aa8.75□□□□□ -1.01
ITSN1-211ENST00000399355 LGALS9BQ3B8N2 356 aa8.75□□□□□ -1.01
ITSN1-211ENST00000399355 LGALS9CQ6DKI2 356 aa8.75□□□□□ -1.01
ITSN1-211ENST00000399355 ANK3Q12955 4377 aaKnown RBP8.75□□□□□ -1.01
ITSN1-211ENST00000399355 DCANP1Q8TF63 244 aa8.75□□□□□ -1.01
ITSN1-211ENST00000399355 PLEKHB2Q96CS7 222 aa8.75□□□□□ -1.01
ITSN1-211ENST00000399355 DAZ1Q9NQZ3 744 aaKnown RBP8.75□□□□□ -1.01
ITSN1-211ENST00000399355 IGHV3-16A0A0C4DH30 117 aa8.75□□□□□ -1.01
ITSN1-211ENST00000399355 LAGE3Q14657 143 aa8.75□□□□□ -1.01
ITSN1-211ENST00000399355 Q8N1Y9 231 aa8.75□□□□□ -1.01
ITSN1-211ENST00000399355 CNFNQ9BYD5 112 aa8.75□□□□□ -1.01
ITSN1-211ENST00000399355 NSD1Q96L73 2696 aaPredicted RBP8.74□□□□□ -1.01
ITSN1-211ENST00000399355 SUMO2P61956 95 aaKnown RBP8.74□□□□□ -1.01
ITSN1-211ENST00000399355 SCGB2A1O75556 95 aa8.74□□□□□ -1.01
ITSN1-211ENST00000399355 SCGB3A1Q96QR1 104 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms