RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 ZNF415Q09FC8 603 aa17.53■□□□□ 0.4
LRFN4-202ENST00000393952 RRN3P1Q2M238 152 aa17.53■□□□□ 0.4
LRFN4-202ENST00000393952 GSN-AS1Q9NRJ2 163 aa17.53■□□□□ 0.4
LRFN4-202ENST00000393952 MUC4Q99102 2169 aa17.53■□□□□ 0.4
LRFN4-202ENST00000393952 RNASE8Q8TDE3 154 aaKnown RBP17.52■□□□□ 0.39
LRFN4-202ENST00000393952 TRBV24-1A0A075B6N3 115 aa17.51■□□□□ 0.39
LRFN4-202ENST00000393952 A0A1B0GUT8 65 aa17.51■□□□□ 0.39
LRFN4-202ENST00000393952 TMEM263Q8WUH6 116 aaKnown RBP17.51■□□□□ 0.39
LRFN4-202ENST00000393952 BORCS7Q96B45 105 aa17.51■□□□□ 0.39
LRFN4-202ENST00000393952 COLCA2A8K830 154 aa17.5■□□□□ 0.39
LRFN4-202ENST00000393952 OR11H2Q8NH07 326 aa17.5■□□□□ 0.39
LRFN4-202ENST00000393952 PHLDA3Q9Y5J5 127 aa17.5■□□□□ 0.39
LRFN4-202ENST00000393952 CNFNQ9BYD5 112 aa17.49■□□□□ 0.39
LRFN4-202ENST00000393952 RETNQ9HD89 108 aa17.49■□□□□ 0.39
LRFN4-202ENST00000393952 ZNF493Q6ZR52 646 aa17.49■□□□□ 0.39
LRFN4-202ENST00000393952 SBSPONQ8IVN8 264 aa17.49■□□□□ 0.39
LRFN4-202ENST00000393952 C16orf74Q96GX8 76 aa17.49■□□□□ 0.39
LRFN4-202ENST00000393952 FAM210BQ96KR6 192 aa17.49■□□□□ 0.39
LRFN4-202ENST00000393952 MSRB1Q9NZV6 116 aa17.49■□□□□ 0.39
LRFN4-202ENST00000393952 SMIM9A6NGZ8 99 aa17.48■□□□□ 0.39
LRFN4-202ENST00000393952 M0R381 172 aa17.48■□□□□ 0.39
LRFN4-202ENST00000393952 NTF3P20783 257 aa17.48■□□□□ 0.39
LRFN4-202ENST00000393952 RIGQ13278 110 aa17.48■□□□□ 0.39
LRFN4-202ENST00000393952 SPANXN1Q5VSR9 72 aa17.48■□□□□ 0.39
LRFN4-202ENST00000393952 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.48■□□□□ 0.39
LRFN4-202ENST00000393952 OVOL2Q9BRP0 275 aa17.48■□□□□ 0.39
LRFN4-202ENST00000393952 A0A1B0GXF2 115 aa17.47■□□□□ 0.39
LRFN4-202ENST00000393952 PLAC8L1A1L4L8 177 aa17.47■□□□□ 0.39
LRFN4-202ENST00000393952 CACNG7P62955 275 aa17.47■□□□□ 0.39
LRFN4-202ENST00000393952 WDR73Q6P4I2 378 aa17.47■□□□□ 0.39
LRFN4-202ENST00000393952 ATP5L2Q7Z4Y8 100 aa17.47■□□□□ 0.39
LRFN4-202ENST00000393952 IL17DQ8TAD2 202 aa17.47■□□□□ 0.39
LRFN4-202ENST00000393952 MRAPQ8TCY5 172 aa17.47■□□□□ 0.39
LRFN4-202ENST00000393952 CAMPP49913 170 aa17.46■□□□□ 0.39
LRFN4-202ENST00000393952 TWIST1Q15672 202 aa17.46■□□□□ 0.39
LRFN4-202ENST00000393952 TP53TG1Q9Y2A0 90 aa17.46■□□□□ 0.39
LRFN4-202ENST00000393952 IGHV4-4A0A075B6R2 117 aa17.45■□□□□ 0.38
LRFN4-202ENST00000393952 NXPH4O95158 308 aa17.45■□□□□ 0.38
LRFN4-202ENST00000393952 HBBP68871 147 aa17.45■□□□□ 0.38
LRFN4-202ENST00000393952 DMRTA1Q5VZB9 504 aa17.45■□□□□ 0.38
LRFN4-202ENST00000393952 SPXQ9BT56 116 aa17.45■□□□□ 0.38
LRFN4-202ENST00000393952 SNURFLB1AK76 121 aa17.45■□□□□ 0.38
LRFN4-202ENST00000393952 ZFP82Q8N141 532 aa17.45■□□□□ 0.38
LRFN4-202ENST00000393952 M0R2P5 195 aa17.44■□□□□ 0.38
LRFN4-202ENST00000393952 IGHV4-28A0A0C4DH34 117 aa17.43■□□□□ 0.38
LRFN4-202ENST00000393952 EMP1P54849 157 aa17.43■□□□□ 0.38
LRFN4-202ENST00000393952 A0A1B0GW15 77 aa17.42■□□□□ 0.38
LRFN4-202ENST00000393952 MIFP14174 115 aa17.42■□□□□ 0.38
LRFN4-202ENST00000393952 RAB5AP20339 215 aa17.42■□□□□ 0.38
LRFN4-202ENST00000393952 ZNF876PQ49A33 203 aa17.42■□□□□ 0.38
LRFN4-202ENST00000393952 SYT8Q8NBV8 401 aa17.42■□□□□ 0.38
LRFN4-202ENST00000393952 NOP10Q9NPE3 64 aaKnown RBP17.42■□□□□ 0.38
LRFN4-202ENST00000393952 MRPL16Q9NX20 251 aaKnown RBP17.42■□□□□ 0.38
LRFN4-202ENST00000393952 Q8NAQ8 132 aa17.41■□□□□ 0.38
LRFN4-202ENST00000393952 DEFB4AO15263 64 aa17.4■□□□□ 0.38
LRFN4-202ENST00000393952 RAB4BP61018 213 aa17.4■□□□□ 0.38
LRFN4-202ENST00000393952 DAZ2Q13117 558 aaKnown RBP17.4■□□□□ 0.38
LRFN4-202ENST00000393952 RASL11AQ6T310 242 aa17.4■□□□□ 0.38
LRFN4-202ENST00000393952 TMEM136Q6ZRR5 245 aa17.4■□□□□ 0.38
LRFN4-202ENST00000393952 S100A8P05109 93 aa17.4■□□□□ 0.38
LRFN4-202ENST00000393952 TRGV1A0A0A0MS02 117 aa17.39■□□□□ 0.37
LRFN4-202ENST00000393952 RPS10P46783 165 aaKnown RBP17.39■□□□□ 0.37
LRFN4-202ENST00000393952 DEFA6Q01524 100 aa17.39■□□□□ 0.37
LRFN4-202ENST00000393952 PTH2Q96A98 100 aa17.39■□□□□ 0.37
LRFN4-202ENST00000393952 TM2D3Q9BRN9 247 aa17.39■□□□□ 0.37
LRFN4-202ENST00000393952 JPT2Q9H910 190 aa17.39■□□□□ 0.37
LRFN4-202ENST00000393952 Q6ZTI0 123 aa17.38■□□□□ 0.37
LRFN4-202ENST00000393952 SPATA25Q9BR10 227 aa17.38■□□□□ 0.37
LRFN4-202ENST00000393952 EVI2AP22794 236 aa17.37■□□□□ 0.37
LRFN4-202ENST00000393952 COX19Q49B96 90 aa17.37■□□□□ 0.37
LRFN4-202ENST00000393952 GATD1Q8NB37 220 aa17.37■□□□□ 0.37
LRFN4-202ENST00000393952 GNB1LQ9BYB4 327 aa17.37■□□□□ 0.37
LRFN4-202ENST00000393952 TENM3Q9P273 2699 aa17.37■□□□□ 0.37
LRFN4-202ENST00000393952 TRGC1P0CF51 173 aa17.36■□□□□ 0.37
LRFN4-202ENST00000393952 RASL10AQ92737 203 aa17.36■□□□□ 0.37
LRFN4-202ENST00000393952 AP1S3Q96PC3 154 aa17.36■□□□□ 0.37
LRFN4-202ENST00000393952 TMEM191AQ9H0A3 160 aa17.36■□□□□ 0.37
LRFN4-202ENST00000393952 MEGF8Q7Z7M0 2845 aa17.35■□□□□ 0.37
LRFN4-202ENST00000393952 LGALS9BQ3B8N2 356 aa17.35■□□□□ 0.37
LRFN4-202ENST00000393952 PIK3CD-AS1Q5SR53 167 aa17.35■□□□□ 0.37
LRFN4-202ENST00000393952 C14orf178Q8N769 122 aaPredicted RBP17.35■□□□□ 0.37
LRFN4-202ENST00000393952 B9D2Q9BPU9 175 aa17.35■□□□□ 0.37
LRFN4-202ENST00000393952 SMIM15Q7Z3B0 74 aa17.34■□□□□ 0.37
LRFN4-202ENST00000393952 SAMD10Q9BYL1 202 aa17.34■□□□□ 0.37
LRFN4-202ENST00000393952 TRAPPC1Q9Y5R8 145 aa17.34■□□□□ 0.37
LRFN4-202ENST00000393952 A0A087WWL8 130 aa17.33■□□□□ 0.37
LRFN4-202ENST00000393952 GAGE12BA1L429 117 aa17.33■□□□□ 0.37
LRFN4-202ENST00000393952 GAGE7O76087 117 aa17.33■□□□□ 0.37
LRFN4-202ENST00000393952 HLA-DQA1P01909 254 aa17.33■□□□□ 0.37
LRFN4-202ENST00000393952 GAGE12FP0CL80 117 aa17.33■□□□□ 0.37
LRFN4-202ENST00000393952 GAGE12GP0CL81 117 aa17.33■□□□□ 0.37
LRFN4-202ENST00000393952 GAGE12IP0CL82 117 aa17.33■□□□□ 0.37
LRFN4-202ENST00000393952 AMN1Q8IY45 258 aa17.33■□□□□ 0.37
LRFN4-202ENST00000393952 MRPL18Q9H0U6 180 aaKnown RBP17.33■□□□□ 0.37
LRFN4-202ENST00000393952 NACAE9PAV3 2078 aa17.33■□□□□ 0.36
LRFN4-202ENST00000393952 MT-ND6P03923 174 aa17.32■□□□□ 0.36
LRFN4-202ENST00000393952 SLAQ13239 276 aa17.32■□□□□ 0.36
LRFN4-202ENST00000393952 FAM222AQ5U5X8 452 aa17.32■□□□□ 0.36
LRFN4-202ENST00000393952 FRZBQ92765 325 aa17.32■□□□□ 0.36
LRFN4-202ENST00000393952 KIF25-AS1Q9Y6Z4 181 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms