RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 NAT8BQ9UHF3 227 aa11.39□□□□□ -0.59
TMEM53-204ENST00000372243 IGHV4-28A0A0C4DH34 117 aa11.38□□□□□ -0.59
TMEM53-204ENST00000372243 CXorf65A6NEN9 183 aa11.38□□□□□ -0.59
TMEM53-204ENST00000372243 HIGD1CA8MV81 97 aa11.38□□□□□ -0.59
TMEM53-204ENST00000372243 CTRLP40313 264 aa11.38□□□□□ -0.59
TMEM53-204ENST00000372243 PTH2Q96A98 100 aa11.38□□□□□ -0.59
TMEM53-204ENST00000372243 TIMM8BQ9Y5J9 83 aaPredicted RBP11.38□□□□□ -0.59
TMEM53-204ENST00000372243 WDR73Q6P4I2 378 aa11.37□□□□□ -0.59
TMEM53-204ENST00000372243 LYZL1Q6UWQ5 148 aa11.37□□□□□ -0.59
TMEM53-204ENST00000372243 CNFNQ9BYD5 112 aa11.37□□□□□ -0.59
TMEM53-204ENST00000372243 DNAH9Q9NYC9 4486 aa11.37□□□□□ -0.59
TMEM53-204ENST00000372243 PIK3CD-AS1Q5SR53 167 aa11.37□□□□□ -0.59
TMEM53-204ENST00000372243 NUP35Q8NFH5 326 aa11.37□□□□□ -0.59
TMEM53-204ENST00000372243 NDUFAF3Q9BU61 184 aa11.37□□□□□ -0.59
TMEM53-204ENST00000372243 C11orf68Q9H3H3 251 aaKnown RBP11.37□□□□□ -0.59
TMEM53-204ENST00000372243 PHLDA3Q9Y5J5 127 aa11.37□□□□□ -0.59
TMEM53-204ENST00000372243 M0R2P5 195 aa11.36□□□□□ -0.59
TMEM53-204ENST00000372243 LGALS9BQ3B8N2 356 aa11.36□□□□□ -0.59
TMEM53-204ENST00000372243 KCNIP4Q6PIL6 250 aa11.36□□□□□ -0.59
TMEM53-204ENST00000372243 TPPP3Q9BW30 176 aa11.36□□□□□ -0.59
TMEM53-204ENST00000372243 PRKDCP78527 4128 aaKnown RBP11.35□□□□□ -0.59
TMEM53-204ENST00000372243 IGHV4-4A0A075B6R2 117 aa11.35□□□□□ -0.59
TMEM53-204ENST00000372243 TRAV9-1A0A075B6T8 112 aa11.35□□□□□ -0.59
TMEM53-204ENST00000372243 SPINK4O60575 86 aa11.35□□□□□ -0.59
TMEM53-204ENST00000372243 S100PP25815 95 aa11.35□□□□□ -0.59
TMEM53-204ENST00000372243 CACNG7P62955 275 aa11.35□□□□□ -0.59
TMEM53-204ENST00000372243 OR10AG1Q8NH19 301 aa11.35□□□□□ -0.59
TMEM53-204ENST00000372243 PGLYRP4Q96LB8 373 aa11.35□□□□□ -0.59
TMEM53-204ENST00000372243 HUWE1Q7Z6Z7 4374 aaKnown RBP11.35□□□□□ -0.59
TMEM53-204ENST00000372243 LYRM9A8MSI8 78 aa11.34□□□□□ -0.59
TMEM53-204ENST00000372243 NXPH4O95158 308 aa11.34□□□□□ -0.59
TMEM53-204ENST00000372243 FAM3BP58499 235 aaPredicted RBP11.34□□□□□ -0.59
TMEM53-204ENST00000372243 ZFP82Q8N141 532 aa11.34□□□□□ -0.59
TMEM53-204ENST00000372243 SYT8Q8NBV8 401 aa11.34□□□□□ -0.59
TMEM53-204ENST00000372243 RASL10AQ92737 203 aa11.34□□□□□ -0.59
TMEM53-204ENST00000372243 BORCS7Q96B45 105 aa11.34□□□□□ -0.59
TMEM53-204ENST00000372243 NOP10Q9NPE3 64 aaKnown RBP11.34□□□□□ -0.59
TMEM53-204ENST00000372243 A0A1B0GUT8 65 aa11.33□□□□□ -0.6
TMEM53-204ENST00000372243 SPANXN1Q5VSR9 72 aa11.33□□□□□ -0.6
TMEM53-204ENST00000372243 SMCO4Q9NRQ5 59 aa11.33□□□□□ -0.6
TMEM53-204ENST00000372243 MUC4Q99102 2169 aa11.33□□□□□ -0.6
TMEM53-204ENST00000372243 TEX48A0A1B0GUV7 120 aa11.33□□□□□ -0.6
TMEM53-204ENST00000372243 EMP1P54849 157 aa11.33□□□□□ -0.6
TMEM53-204ENST00000372243 ZNF876PQ49A33 203 aa11.33□□□□□ -0.6
TMEM53-204ENST00000372243 BTF3L4Q96K17 158 aa11.33□□□□□ -0.6
TMEM53-204ENST00000372243 DKK2Q9UBU2 259 aa11.33□□□□□ -0.6
TMEM53-204ENST00000372243 M0R381 172 aa11.32□□□□□ -0.6
TMEM53-204ENST00000372243 DEFB4AO15263 64 aa11.32□□□□□ -0.6
TMEM53-204ENST00000372243 NTF3P20783 257 aa11.32□□□□□ -0.6
TMEM53-204ENST00000372243 DMRTA1Q5VZB9 504 aa11.32□□□□□ -0.6
TMEM53-204ENST00000372243 ATP5L2Q7Z4Y8 100 aa11.32□□□□□ -0.6
TMEM53-204ENST00000372243 LINC00612Q8N6U2 182 aa11.32□□□□□ -0.6
TMEM53-204ENST00000372243 TRGV1A0A0A0MS02 117 aa11.31□□□□□ -0.6
TMEM53-204ENST00000372243 A0A1B0GW15 77 aa11.31□□□□□ -0.6
TMEM53-204ENST00000372243 SPART-AS1P0CW21 52 aa11.31□□□□□ -0.6
TMEM53-204ENST00000372243 RIGQ13278 110 aa11.31□□□□□ -0.6
TMEM53-204ENST00000372243 FAM222AQ5U5X8 452 aa11.31□□□□□ -0.6
TMEM53-204ENST00000372243 C18orf15Q96N68 181 aa11.31□□□□□ -0.6
TMEM53-204ENST00000372243 MRPL16Q9NX20 251 aaKnown RBP11.31□□□□□ -0.6
TMEM53-204ENST00000372243 URGCP-MRPS24S4R325 110 aa11.31□□□□□ -0.6
TMEM53-204ENST00000372243 TENM3Q9P273 2699 aa11.3□□□□□ -0.6
TMEM53-204ENST00000372243 MUC21A0A0G2JKD1 596 aa11.3□□□□□ -0.6
TMEM53-204ENST00000372243 A0A0J9YWU9 116 aa11.3□□□□□ -0.6
TMEM53-204ENST00000372243 MUC21A0A140T8X8 626 aa11.3□□□□□ -0.6
TMEM53-204ENST00000372243 ELOBQ15370 118 aa11.3□□□□□ -0.6
TMEM53-204ENST00000372243 TWIST1Q15672 202 aa11.3□□□□□ -0.6
TMEM53-204ENST00000372243 Q6ZTI0 123 aa11.3□□□□□ -0.6
TMEM53-204ENST00000372243 A0A1B0GXF2 115 aa11.29□□□□□ -0.6
TMEM53-204ENST00000372243 TMEM88Q6PEY1 159 aa11.29□□□□□ -0.6
TMEM53-204ENST00000372243 CBLN2Q8IUK8 224 aa11.29□□□□□ -0.6
TMEM53-204ENST00000372243 YPEL4Q96NS1 127 aa11.29□□□□□ -0.6
TMEM53-204ENST00000372243 COL7A1Q02388 2944 aa11.29□□□□□ -0.6
TMEM53-204ENST00000372243 TRBV24-1A0A075B6N3 115 aa11.28□□□□□ -0.6
TMEM53-204ENST00000372243 A8MWV9 139 aa11.28□□□□□ -0.6
TMEM53-204ENST00000372243 TRGC1P0CF51 173 aa11.28□□□□□ -0.6
TMEM53-204ENST00000372243 RASL11AQ6T310 242 aa11.28□□□□□ -0.6
TMEM53-204ENST00000372243 MSRB1Q9NZV6 116 aa11.28□□□□□ -0.6
TMEM53-204ENST00000372243 GAGE12BA1L429 117 aa11.28□□□□□ -0.6
TMEM53-204ENST00000372243 GAGE7O76087 117 aa11.28□□□□□ -0.6
TMEM53-204ENST00000372243 S100A8P05109 93 aa11.28□□□□□ -0.6
TMEM53-204ENST00000372243 GAGE12FP0CL80 117 aa11.28□□□□□ -0.6
TMEM53-204ENST00000372243 GAGE12GP0CL81 117 aa11.28□□□□□ -0.6
TMEM53-204ENST00000372243 GAGE12IP0CL82 117 aa11.28□□□□□ -0.6
TMEM53-204ENST00000372243 SSTP61278 116 aa11.28□□□□□ -0.6
TMEM53-204ENST00000372243 HBBP68871 147 aa11.28□□□□□ -0.6
TMEM53-204ENST00000372243 MRPL54Q6P161 138 aaKnown RBP11.28□□□□□ -0.6
TMEM53-204ENST00000372243 AP1S3Q96PC3 154 aa11.28□□□□□ -0.6
TMEM53-204ENST00000372243 CELA1Q9UNI1 258 aa11.28□□□□□ -0.6
TMEM53-204ENST00000372243 RS1O15537 224 aa11.27□□□□□ -0.61
TMEM53-204ENST00000372243 CIDEAO60543 219 aa11.27□□□□□ -0.61
TMEM53-204ENST00000372243 SCO1O75880 301 aa11.27□□□□□ -0.61
TMEM53-204ENST00000372243 GATD1Q8NB37 220 aa11.27□□□□□ -0.61
TMEM53-204ENST00000372243 FBN3Q75N90 2809 aa11.27□□□□□ -0.61
TMEM53-204ENST00000372243 TRGV2A0A075B6R0 118 aa11.26□□□□□ -0.61
TMEM53-204ENST00000372243 TRAV4A0A0B4J268 109 aa11.26□□□□□ -0.61
TMEM53-204ENST00000372243 DEFB130BP0DP73 79 aa11.26□□□□□ -0.61
TMEM53-204ENST00000372243 DEFB130AP0DP74 79 aa11.26□□□□□ -0.61
TMEM53-204ENST00000372243 DAD1P61803 113 aa11.26□□□□□ -0.61
TMEM53-204ENST00000372243 CFAP126Q5VTH2 177 aa11.26□□□□□ -0.61
TMEM53-204ENST00000372243 SMIM15Q7Z3B0 74 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms