RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 BAGE3Q86Y29 109 aa9.75□□□□□ -0.85
SLIRP-201ENST00000238688 TMEM256Q8N2U0 113 aa9.75□□□□□ -0.85
SLIRP-201ENST00000238688 TPPP3Q9BW30 176 aa9.75□□□□□ -0.85
SLIRP-201ENST00000238688 FRMD6-AS1P0C7T7 363 aa9.74□□□□□ -0.85
SLIRP-201ENST00000238688 RAB4AP20338 218 aa9.74□□□□□ -0.85
SLIRP-201ENST00000238688 PMCHP20382 165 aa9.74□□□□□ -0.85
SLIRP-201ENST00000238688 NTF3P20783 257 aa9.74□□□□□ -0.85
SLIRP-201ENST00000238688 C9orf66Q5T8R8 295 aa9.74□□□□□ -0.85
SLIRP-201ENST00000238688 GFI1BQ5VTD9 330 aa9.74□□□□□ -0.85
SLIRP-201ENST00000238688 C18orf32Q8TCD1 76 aa9.74□□□□□ -0.85
SLIRP-201ENST00000238688 CHCHD1Q96BP2 118 aaKnown RBP9.74□□□□□ -0.85
SLIRP-201ENST00000238688 NDUFAF3Q9BU61 184 aa9.74□□□□□ -0.85
SLIRP-201ENST00000238688 U3KQK5 164 aa9.74□□□□□ -0.85
SLIRP-201ENST00000238688 AGRNO00468 2067 aa9.73□□□□□ -0.85
SLIRP-201ENST00000238688 PPP1R17O96001 155 aa9.73□□□□□ -0.85
SLIRP-201ENST00000238688 ODF3L2Q3SX64 289 aa9.73□□□□□ -0.85
SLIRP-201ENST00000238688 ANXA2RQ3ZCQ2 193 aa9.73□□□□□ -0.85
SLIRP-201ENST00000238688 SPANXN1Q5VSR9 72 aa9.73□□□□□ -0.85
SLIRP-201ENST00000238688 ORMDL3Q8N138 153 aa9.73□□□□□ -0.85
SLIRP-201ENST00000238688 PTH2Q96A98 100 aa9.73□□□□□ -0.85
SLIRP-201ENST00000238688 PHLDA3Q9Y5J5 127 aa9.73□□□□□ -0.85
SLIRP-201ENST00000238688 IGHV1OR15-1A0A075B7D0 117 aa9.72□□□□□ -0.85
SLIRP-201ENST00000238688 AKR1D1P51857 326 aa9.72□□□□□ -0.85
SLIRP-201ENST00000238688 STHQ8IWL8 128 aa9.72□□□□□ -0.85
SLIRP-201ENST00000238688 DEFB125Q8N687 156 aa9.72□□□□□ -0.85
SLIRP-201ENST00000238688 SYT8Q8NBV8 401 aa9.72□□□□□ -0.85
SLIRP-201ENST00000238688 HIST1H2BLQ99880 126 aa9.72□□□□□ -0.85
SLIRP-201ENST00000238688 GRIFINA4D1Z8 144 aa9.71□□□□□ -0.86
SLIRP-201ENST00000238688 H3BVH4 76 aa9.71□□□□□ -0.86
SLIRP-201ENST00000238688 INSP01308 110 aa9.71□□□□□ -0.86
SLIRP-201ENST00000238688 MORN3Q6PF18 240 aaPredicted RBP9.71□□□□□ -0.86
SLIRP-201ENST00000238688 MRAP2Q96G30 205 aa9.71□□□□□ -0.86
SLIRP-201ENST00000238688 AP1S3Q96PC3 154 aa9.71□□□□□ -0.86
SLIRP-201ENST00000238688 C1QTNF4Q9BXJ3 329 aa9.71□□□□□ -0.86
SLIRP-201ENST00000238688 NAGKQ9UJ70 344 aa9.71□□□□□ -0.86
SLIRP-201ENST00000238688 TRAV12-3A0A0B4J271 114 aa9.7□□□□□ -0.86
SLIRP-201ENST00000238688 DEFB1P60022 68 aa9.7□□□□□ -0.86
SLIRP-201ENST00000238688 SPINK13Q1W4C9 94 aa9.7□□□□□ -0.86
SLIRP-201ENST00000238688 TRPT1Q86TN4 253 aaKnown RBP9.7□□□□□ -0.86
SLIRP-201ENST00000238688 C9orf85Q96MD7 179 aa9.7□□□□□ -0.86
SLIRP-201ENST00000238688 KNCNA6PVL3 124 aa9.69□□□□□ -0.86
SLIRP-201ENST00000238688 SERF1AO75920 110 aa9.69□□□□□ -0.86
SLIRP-201ENST00000238688 CD7P09564 240 aa9.69□□□□□ -0.86
SLIRP-201ENST00000238688 PRB4P10163 310 aaPredicted RBP9.69□□□□□ -0.86
SLIRP-201ENST00000238688 RNASE3P12724 160 aaKnown RBP9.69□□□□□ -0.86
SLIRP-201ENST00000238688 FABP4P15090 132 aa9.69□□□□□ -0.86
SLIRP-201ENST00000238688 KIAA1644Q3SXP7 199 aa9.69□□□□□ -0.86
SLIRP-201ENST00000238688 OR10AG1Q8NH19 301 aa9.69□□□□□ -0.86
SLIRP-201ENST00000238688 DPH3P1Q9H4G8 78 aa9.69□□□□□ -0.86
SLIRP-201ENST00000238688 GSN-AS1Q9NRJ2 163 aa9.69□□□□□ -0.86
SLIRP-201ENST00000238688 IGHV3-16A0A0C4DH30 117 aa9.68□□□□□ -0.86
SLIRP-201ENST00000238688 IFITM10A6NMD0 228 aa9.68□□□□□ -0.86
SLIRP-201ENST00000238688 K7EMI3 77 aa9.68□□□□□ -0.86
SLIRP-201ENST00000238688 M0R2Z0 102 aa9.68□□□□□ -0.86
SLIRP-201ENST00000238688 M0R381 172 aa9.68□□□□□ -0.86
SLIRP-201ENST00000238688 CKS2P33552 79 aa9.68□□□□□ -0.86
SLIRP-201ENST00000238688 MRPL51Q4U2R6 128 aaKnown RBP9.68□□□□□ -0.86
SLIRP-201ENST00000238688 POM121L12Q8N7R1 296 aa9.68□□□□□ -0.86
SLIRP-201ENST00000238688 PRELID3AQ96N28 172 aa9.68□□□□□ -0.86
SLIRP-201ENST00000238688 SAMD10Q9BYL1 202 aa9.68□□□□□ -0.86
SLIRP-201ENST00000238688 ZMAT5Q9UDW3 170 aaKnown RBP9.68□□□□□ -0.86
SLIRP-201ENST00000238688 PRSS47A8MTI9 375 aa9.67□□□□□ -0.86
SLIRP-201ENST00000238688 J3KRW8 73 aa9.67□□□□□ -0.86
SLIRP-201ENST00000238688 CRXO43186 299 aaPredicted RBP9.67□□□□□ -0.86
SLIRP-201ENST00000238688 HSBP1O75506 76 aa9.67□□□□□ -0.86
SLIRP-201ENST00000238688 DEFB121Q5J5C9 76 aa9.67□□□□□ -0.86
SLIRP-201ENST00000238688 MUC21Q5SSG8 566 aa9.67□□□□□ -0.86
SLIRP-201ENST00000238688 GTSCR1Q86UQ5 136 aa9.67□□□□□ -0.86
SLIRP-201ENST00000238688 AMN1Q8IY45 258 aa9.67□□□□□ -0.86
SLIRP-201ENST00000238688 LINC00518Q8N0U6 118 aa9.67□□□□□ -0.86
SLIRP-201ENST00000238688 SPXQ9BT56 116 aa9.67□□□□□ -0.86
SLIRP-201ENST00000238688 NXT2Q9NPJ8 142 aaKnown RBP9.67□□□□□ -0.86
SLIRP-201ENST00000238688 SELENOKQ9Y6D0 94 aa9.67□□□□□ -0.86
SLIRP-201ENST00000238688 LINC00614P0C842 121 aa9.66□□□□□ -0.86
SLIRP-201ENST00000238688 SMIM17P0DL12 118 aa9.66□□□□□ -0.86
SLIRP-201ENST00000238688 LINC00310P59036 64 aa9.66□□□□□ -0.86
SLIRP-201ENST00000238688 ZNF415Q09FC8 603 aa9.66□□□□□ -0.86
SLIRP-201ENST00000238688 Q8N1Y9 231 aa9.66□□□□□ -0.86
SLIRP-201ENST00000238688 OR10D4PQ8NGN7 298 aa9.66□□□□□ -0.86
SLIRP-201ENST00000238688 MAP1LC3AQ9H492 121 aa9.66□□□□□ -0.86
SLIRP-201ENST00000238688 AP5S1Q9NUS5 200 aa9.66□□□□□ -0.86
SLIRP-201ENST00000238688 KMT2CQ8NEZ4 4911 aaKnown RBP9.66□□□□□ -0.86
SLIRP-201ENST00000238688 MUC4Q99102 2169 aa9.65□□□□□ -0.86
SLIRP-201ENST00000238688 LINC01546A6NGU7 62 aa9.65□□□□□ -0.86
SLIRP-201ENST00000238688 D6R8Y8 96 aa9.65□□□□□ -0.86
SLIRP-201ENST00000238688 IGKV3-20P01619 116 aa9.65□□□□□ -0.86
SLIRP-201ENST00000238688 AMTP48728 403 aa9.65□□□□□ -0.86
SLIRP-201ENST00000238688 KIR3DS1Q14943 382 aa9.65□□□□□ -0.86
SLIRP-201ENST00000238688 RNF185Q96GF1 192 aa9.65□□□□□ -0.86
SLIRP-201ENST00000238688 B9D2Q9BPU9 175 aa9.65□□□□□ -0.86
SLIRP-201ENST00000238688 C19orf73Q9NVV2 129 aa9.65□□□□□ -0.86
SLIRP-201ENST00000238688 TRAV12-2A0A075B6T6 113 aa9.64□□□□□ -0.87
SLIRP-201ENST00000238688 RBMY1BA6NDE4 496 aaKnown RBP9.64□□□□□ -0.87
SLIRP-201ENST00000238688 RBMY1EA6NEQ0 496 aaKnown RBP9.64□□□□□ -0.87
SLIRP-201ENST00000238688 CBY3A6NI87 242 aa9.64□□□□□ -0.87
SLIRP-201ENST00000238688 LINC01549A6NIU2 74 aa9.64□□□□□ -0.87
SLIRP-201ENST00000238688 GNRH2O43555 120 aa9.64□□□□□ -0.87
SLIRP-201ENST00000238688 RBMY1DP0C7P1 496 aaKnown RBP9.64□□□□□ -0.87
SLIRP-201ENST00000238688 RPL32P62910 135 aaKnown RBP9.64□□□□□ -0.87
SLIRP-201ENST00000238688 JOSD1Q15040 202 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms