RNA–Protein interactions for RNA: ENSMUST00000213114.1

Ldlr-202, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-202ENSMUST00000213114 D830044I16RikA0A1D5RM53 117 aa7.92□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Olfr1098A2AVB0 315 aa7.92□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Vmn1r149E9PWL6 307 aa7.92□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Vmn1r101E9Q365 307 aa7.92□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Vmn1r158G3UY92 307 aa7.92□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Gm10665K7N6B7 321 aa7.92□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Defa9P50707 93 aa7.92□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Pate4Q09098 99 aa7.92□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Btf3Q64152 204 aaKnown RBP7.92□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Olfr1434Q7TQR9 312 aa7.92□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Rgs13Q8K443 158 aa7.92□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Dennd4cA6H8H2 1906 aa7.91□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Rhox7bA6PW38 321 aa7.91□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Olfr918E9PVZ7 325 aa7.91□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Vmn1r78K7N608 313 aa7.91□□□□□ -1.14
Ldlr-202ENSMUST00000213114 MyadmO35682 320 aaKnown RBP7.91□□□□□ -1.14
Ldlr-202ENSMUST00000213114 RtbdnQ8QZY4 247 aa7.91□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Gpr87Q99MT7 358 aa7.91□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Kcnmb2Q9CZM9 235 aa7.91□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Ceacam11Q9D0Z8 303 aa7.91□□□□□ -1.14
Ldlr-202ENSMUST00000213114 LitafQ9JLJ0 161 aa7.91□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Mpdu1Q9R0Q9 247 aa7.91□□□□□ -1.14
Ldlr-202ENSMUST00000213114 St6galnac3Q9WUV2 305 aa7.91□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Pcnx3Q8VI59 2028 aa7.91□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Rai1Q61818 1889 aa7.91□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Ighv6-3A0A075B5T2 118 aa7.91□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Ighv1-47A0A0A6YY41 117 aa7.91□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Ren2P00796 401 aa7.91□□□□□ -1.14
Ldlr-202ENSMUST00000213114 P01759 136 aa7.91□□□□□ -1.14
Ldlr-202ENSMUST00000213114 LtbP41155 306 aa7.91□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Ms4a8Q99N10 290 aa7.91□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Cldn23Q9D7D7 296 aa7.91□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Usf3B2RUQ2 2221 aa7.91□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Ighv9-2A0A0B4J1J4 117 aa7.91□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Wfdc11A2A5H7 82 aa7.91□□□□□ -1.14
Ldlr-202ENSMUST00000213114 H2-M5A7VMS3 348 aa7.91□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Wisp3D3Z5L9 354 aa7.91□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Gm14548E9Q1Z6 680 aa7.91□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Gm21719J3KMI9 230 aa7.91□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Bet1lO35153 111 aa7.91□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Kazald1Q8BJ66 313 aa7.91□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Olfr127Q8VF25 323 aa7.91□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Olfr1339Q8VGB1 315 aa7.91□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Plrg1Q922V4 513 aaKnown RBP7.91□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Gpa33Q9JKA5 319 aa7.91□□□□□ -1.14
Ldlr-202ENSMUST00000213114 P01655 112 aa7.9□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Ccl2P10148 148 aa7.9□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Nr2c2apQ3TV70 140 aa7.9□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Reep5Q60870 185 aa7.9□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Rnf2Q9CQJ4 336 aa7.9□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Rnd2Q9QYM5 227 aa7.9□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Trav13n-4A0A0G2JG01 110 aa7.9□□□□□ -1.14
Ldlr-202ENSMUST00000213114 AsmtD3KU66 387 aa7.9□□□□□ -1.14
Ldlr-202ENSMUST00000213114 1700015F17RikD3YUK8 150 aa7.9□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Scgb2a2J3KMP9 96 aa7.9□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Gm21882J3QN86 361 aa7.9□□□□□ -1.14
Ldlr-202ENSMUST00000213114 A630076J17RikJ3QQ32 107 aa7.9□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Slc17a2Q5SZA1 478 aa7.9□□□□□ -1.14
Ldlr-202ENSMUST00000213114 AgerQ62151 402 aa7.9□□□□□ -1.14
Ldlr-202ENSMUST00000213114 4930474N05RikQ8BVR5 218 aa7.9□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Q8VC23 124 aa7.9□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Olfr1431Q8VF59 312 aa7.9□□□□□ -1.14
Ldlr-202ENSMUST00000213114 Defa35E9QLQ1 93 aa7.9□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Spink11Q09TK7 88 aa7.9□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Olfr1228Q8VGM9 323 aa7.9□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Vmn1r46Q9EQ45 309 aa7.9□□□□□ -1.15
Ldlr-202ENSMUST00000213114 OtoglF7A4A7 2325 aa7.9□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Igkv12-89A0A0G2JGW8 112 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Olfr399Q7TRX3 311 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Vstm2aQ8R0A6 236 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Olfr1030Q8VFL5 318 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Olfr1243Q8VGM7 305 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Olfr1413Q8VGU3 323 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Scrt1Q99M85 348 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Chchd1Q9CQA6 118 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Tspo2Q9CRZ8 162 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Egr4Q9WUF2 478 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Tln1P26039 2541 aaKnown RBP7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Trav6d-5A0A075B6B9 112 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Gm20773A0A0A6YXW2 232 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Gm20807A0A0A6YXX7 232 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 A0A1L1SR50 188 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Gm12886B1AZM5 119 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Olfr1116E9PXB8 307 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Cpsf4lE9Q2N0 280 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Gm20873J3QMQ9 232 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Gm20795J3QP49 232 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Rnase2bO35292 155 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Gm21440Q3TTD8 232 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Fam206aQ80ZQ9 193 aaKnown RBP7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Lrtm1Q8BXQ3 356 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Ercc8Q8CFD5 397 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Ighv14-2A0A075B5R7 117 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 CebpdQ00322 268 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 ApohQ01339 345 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 ElaneQ3UP87 265 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Wfdc21Q8BTE6 63 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Myoz1Q9JK37 296 aa7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Prr12E9PYL2 2035 aaKnown RBP7.89□□□□□ -1.15
Ldlr-202ENSMUST00000213114 Parp4E9PYK3 1969 aa7.89□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 38 ms