RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Hist1h2bpQ8CGP2 126 aaKnown RBP8.39□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Olfr824Q8VFU4 315 aa8.39□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Gpa33Q9JKA5 319 aa8.39□□□□□ -1.07
Ldlr-201ENSMUST00000034713 1700015F17RikD3YUK8 150 aa8.39□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Cdkn1bP46414 197 aa8.39□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Rnase9P60154 184 aa8.39□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Rab1bQ9D1G1 201 aa8.39□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Bhlha15Q9QYC3 197 aa8.39□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Plcxd2B2RXA1 340 aa8.39□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Tstd1E9PY03 133 aa8.39□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Fam240aJ3QNP9 97 aa8.39□□□□□ -1.07
Ldlr-201ENSMUST00000034713 CrygsO35486 178 aa8.39□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Tff1Q08423 87 aa8.39□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Olfr127Q8VF25 323 aa8.39□□□□□ -1.07
Ldlr-201ENSMUST00000034713 St6galnac3Q9WUV2 305 aa8.39□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Trav6-1A0A075B5Z8 112 aa8.39□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Tmem116A0A0G2JGD3 401 aa8.39□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Onecut1O08755 465 aa8.39□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Hhipl1Q14DK5 791 aa8.39□□□□□ -1.07
Ldlr-201ENSMUST00000034713 GalnsQ571E4 520 aa8.39□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Nanos1Q80WY3 267 aa8.39□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Tmem140Q8BGY5 185 aa8.39□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Ercc8Q8CFD5 397 aa8.39□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Olfr195Q8VGQ6 308 aa8.39□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Mrpl13Q9D1P0 178 aaKnown RBP8.39□□□□□ -1.07
Ldlr-201ENSMUST00000034713 TslpQ9JIE6 140 aa8.39□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Scgb1b11A0A087WQJ0 93 aa8.38□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Ighv9-2A0A0B4J1J4 117 aa8.38□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Frrs1lB1AXV0 293 aa8.38□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Zfp11P10751 647 aa8.38□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Rpl27aP14115 148 aaKnown RBP8.38□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Zpld1Q8BGZ8 415 aa8.38□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Olfr365Q8VFT2 312 aa8.38□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Q91WE4 72 aa8.38□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Gm12728V9GX31 77 aa8.38□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Pglyrp3A1A547 347 aa8.38□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Pax9P47242 342 aa8.38□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Cdx4Q07424 282 aa8.38□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Prss35Q8C0F9 409 aa8.38□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Rhno1Q8K3A4 235 aa8.38□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Abca1P41233 2261 aa8.38□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Prrx2Q06348 247 aa8.38□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Smim19Q80ZU4 107 aa8.38□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Olfr982Q8VGB3 321 aa8.38□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Mogat1Q91ZV4 335 aa8.38□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Bpifa5Q9CQX3 270 aa8.38□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Cldn23Q9D7D7 296 aa8.38□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Fxyd1Q9Z239 92 aa8.38□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Med13Q5SWW4 2171 aa8.38□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Ighv14-2A0A075B5R7 117 aa8.38□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Lbhd2G3UW55 114 aa8.38□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Efna4O08542 206 aa8.38□□□□□ -1.07
Ldlr-201ENSMUST00000034713 P01759 136 aa8.38□□□□□ -1.07
Ldlr-201ENSMUST00000034713 LtbP41155 306 aa8.38□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Htr1dQ61224 374 aa8.38□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Ntf4Q80VU4 209 aa8.38□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Olfr894Q9EQB2 313 aa8.38□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Col5a3Q9JLI2 1739 aa8.37□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Ighv9-4A0A0A6YWH6 117 aa8.37□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Igkv4-50A0A0B4J1J0 117 aa8.37□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Ighv1-76A0A0G2JFE9 117 aa8.37□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Gm12886B1AZM5 119 aa8.37□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Psmg4P0C7N9 123 aa8.37□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Dnase2P56542 353 aa8.37□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Higd1cQ76I25 96 aa8.37□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Kazald1Q8BJ66 313 aa8.37□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Bricd5Q8BV89 174 aa8.37□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Ptrh2Q8R2Y8 181 aaKnown RBP8.37□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Olfr1256Q8VGP1 306 aa8.37□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Egr4Q9WUF2 478 aa8.37□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Tcrg-C2A0A075B5Z2 167 aa8.37□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Defa37K9J724 93 aa8.37□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Iglc3P01845 104 aa8.37□□□□□ -1.07
Ldlr-201ENSMUST00000034713 P01853 167 aa8.37□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Egr1P08046 533 aa8.37□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Ccl3P10855 92 aa8.37□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Defa5P28312 93 aa8.37□□□□□ -1.07
Ldlr-201ENSMUST00000034713 TbpP29037 316 aa8.37□□□□□ -1.07
Ldlr-201ENSMUST00000034713 ElaneQ3UP87 265 aa8.37□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Olfr148Q60887 310 aa8.37□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Fam222bQ6P539 562 aa8.37□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Gm10190Q8BSD7 107 aa8.37□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Gm10762Q9CZN6 115 aa8.37□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Vmn1r63Q9EPT1 300 aa8.37□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Rnase4Q9JJH1 148 aa8.37□□□□□ -1.07
Ldlr-201ENSMUST00000034713 EsdQ9R0P3 282 aa8.37□□□□□ -1.07
Ldlr-201ENSMUST00000034713 MylkQ6PDN3 1941 aaKnown RBP8.37□□□□□ -1.07
Ldlr-201ENSMUST00000034713 MpdzQ8VBX6 2055 aa8.37□□□□□ -1.07
Ldlr-201ENSMUST00000034713 E430018J23RikE9PZQ8 461 aa8.37□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Gfra3O35118 397 aa8.37□□□□□ -1.07
Ldlr-201ENSMUST00000034713 AvpP35455 168 aa8.37□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Plp1P60202 277 aa8.37□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Shisa6Q3UH99 525 aa8.37□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Rnf126Q91YL2 313 aa8.37□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Tmub1Q9JMG3 245 aa8.37□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Olfr1016A2ASV2 309 aa8.36□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Bet1lO35153 111 aa8.36□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Hoxb2P0C1T1 354 aa8.36□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Zfp36P22893 319 aaKnown RBP8.36□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Olfr875Q7TRE5 310 aa8.36□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 38.8 ms