RNA–Protein interactions for RNA: ENSMUST00000005503.3

Msh6-201, Transcript of DNA mismatch repair protein Msh6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msh6, Length 4,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6-201ENSMUST00000005503 BC049762Q8C601 163 aa10.64□□□□□ -0.71
Msh6-201ENSMUST00000005503 Defa34D3Z0J0 93 aa10.63□□□□□ -0.71
Msh6-201ENSMUST00000005503 Mbd6Q3TY92 1003 aa10.63□□□□□ -0.71
Msh6-201ENSMUST00000005503 Prr15Q9D1T5 122 aa10.63□□□□□ -0.71
Msh6-201ENSMUST00000005503 Olfr894Q9EQB2 313 aa10.63□□□□□ -0.71
Msh6-201ENSMUST00000005503 Rnf7Q9WTZ1 113 aa10.63□□□□□ -0.71
Msh6-201ENSMUST00000005503 Fbln5Q9WVH9 448 aa10.63□□□□□ -0.71
Msh6-201ENSMUST00000005503 Prr12E9PYL2 2035 aaKnown RBP10.63□□□□□ -0.71
Msh6-201ENSMUST00000005503 Ighv4-1A0A075B5R5 116 aa10.63□□□□□ -0.71
Msh6-201ENSMUST00000005503 Frrs1lB1AXV0 293 aa10.63□□□□□ -0.71
Msh6-201ENSMUST00000005503 Gm12886B1AZM5 119 aa10.63□□□□□ -0.71
Msh6-201ENSMUST00000005503 Cldn34c3J3QJW5 233 aa10.63□□□□□ -0.71
Msh6-201ENSMUST00000005503 Gm21789J3QMZ1 123 aa10.63□□□□□ -0.71
Msh6-201ENSMUST00000005503 Gm21870J3QPN2 123 aa10.63□□□□□ -0.71
Msh6-201ENSMUST00000005503 Gm21883J3QPV3 123 aa10.63□□□□□ -0.71
Msh6-201ENSMUST00000005503 Pdlim4P70271 330 aa10.63□□□□□ -0.71
Msh6-201ENSMUST00000005503 Trav15-1-dv6-1Q5R1D2 117 aa10.63□□□□□ -0.71
Msh6-201ENSMUST00000005503 SlaQ60898 281 aa10.63□□□□□ -0.71
Msh6-201ENSMUST00000005503 Gpank1Q61858 372 aa10.63□□□□□ -0.71
Msh6-201ENSMUST00000005503 Prss35Q8C0F9 409 aa10.63□□□□□ -0.71
Msh6-201ENSMUST00000005503 Olfr1269Q8VEZ2 309 aa10.63□□□□□ -0.71
Msh6-201ENSMUST00000005503 Tmem50aQ9CXL1 157 aa10.63□□□□□ -0.71
Msh6-201ENSMUST00000005503 Gm2381G3UY53 305 aa10.63□□□□□ -0.71
Msh6-201ENSMUST00000005503 Cldn34c2J3QNM1 233 aa10.63□□□□□ -0.71
Msh6-201ENSMUST00000005503 Gnb2P62880 340 aa10.63□□□□□ -0.71
Msh6-201ENSMUST00000005503 Tspan7Q62283 249 aa10.63□□□□□ -0.71
Msh6-201ENSMUST00000005503 Olfr875Q7TRE5 310 aa10.63□□□□□ -0.71
Msh6-201ENSMUST00000005503 Olfr91Q7TRL3 312 aa10.63□□□□□ -0.71
Msh6-201ENSMUST00000005503 Cldn34c1Q8K193 234 aa10.63□□□□□ -0.71
Msh6-201ENSMUST00000005503 Olfr1258Q8VGN6 311 aa10.63□□□□□ -0.71
Msh6-201ENSMUST00000005503 Trbv1A0A0B4J1G7 116 aa10.62□□□□□ -0.71
Msh6-201ENSMUST00000005503 Gm45623A0A1B0GSF6 103 aa10.62□□□□□ -0.71
Msh6-201ENSMUST00000005503 Zfp114B2RRA8 586 aa10.62□□□□□ -0.71
Msh6-201ENSMUST00000005503 Lbhd2G3UW55 114 aa10.62□□□□□ -0.71
Msh6-201ENSMUST00000005503 Sub1P11031 127 aaKnown RBP10.62□□□□□ -0.71
Msh6-201ENSMUST00000005503 Defb20Q30KP3 96 aa10.62□□□□□ -0.71
Msh6-201ENSMUST00000005503 Olfr1181Q7TR18 311 aa10.62□□□□□ -0.71
Msh6-201ENSMUST00000005503 Sfxn3Q91V61 321 aa10.62□□□□□ -0.71
Msh6-201ENSMUST00000005503 Rnd2Q9QYM5 227 aa10.62□□□□□ -0.71
Msh6-201ENSMUST00000005503 MgamB5THE2 1827 aa10.62□□□□□ -0.71
Msh6-201ENSMUST00000005503 Ighv7-2A0A0A6YX91 119 aa10.62□□□□□ -0.71
Msh6-201ENSMUST00000005503 Ighv1-76A0A0G2JFE9 117 aa10.62□□□□□ -0.71
Msh6-201ENSMUST00000005503 DdtO35215 118 aa10.62□□□□□ -0.71
Msh6-201ENSMUST00000005503 Iglc2P01844 104 aa10.62□□□□□ -0.71
Msh6-201ENSMUST00000005503 Cma2Q91VB1 246 aa10.62□□□□□ -0.71
Msh6-201ENSMUST00000005503 Gm10306Q9CUK2 115 aa10.62□□□□□ -0.71
Msh6-201ENSMUST00000005503 Ighv9-1A0A0B4J1P3 117 aa10.62□□□□□ -0.71
Msh6-201ENSMUST00000005503 Rnase2O35291 155 aa10.62□□□□□ -0.71
Msh6-201ENSMUST00000005503 Sc5dO88822 299 aa10.62□□□□□ -0.71
Msh6-201ENSMUST00000005503 Zfp36P22893 319 aaKnown RBP10.62□□□□□ -0.71
Msh6-201ENSMUST00000005503 Mex3bQ69Z36 601 aaKnown RBP10.62□□□□□ -0.71
Msh6-201ENSMUST00000005503 Rpl24Q8BP67 157 aaKnown RBP10.62□□□□□ -0.71
Msh6-201ENSMUST00000005503 Olfr1330Q8VEY6 315 aa10.62□□□□□ -0.71
Msh6-201ENSMUST00000005503 Dnase2bQ9QY48 354 aa10.62□□□□□ -0.71
Msh6-201ENSMUST00000005503 Hsbp1l1B2RXB2 72 aa10.61□□□□□ -0.71
Msh6-201ENSMUST00000005503 4931428L18RikQ9D4S9 127 aa10.61□□□□□ -0.71
Msh6-201ENSMUST00000005503 Trav12d-1A0N8R0 115 aa10.61□□□□□ -0.71
Msh6-201ENSMUST00000005503 Klrd1O54707 179 aa10.61□□□□□ -0.71
Msh6-201ENSMUST00000005503 Ins1P01325 108 aa10.61□□□□□ -0.71
Msh6-201ENSMUST00000005503 Rnase9P60154 184 aa10.61□□□□□ -0.71
Msh6-201ENSMUST00000005503 Atp6v0cP63082 155 aa10.61□□□□□ -0.71
Msh6-201ENSMUST00000005503 CiartQ3TQ03 375 aa10.61□□□□□ -0.71
Msh6-201ENSMUST00000005503 Olfr148Q60887 310 aa10.61□□□□□ -0.71
Msh6-201ENSMUST00000005503 Foxl1Q64731 336 aa10.61□□□□□ -0.71
Msh6-201ENSMUST00000005503 Msrb3Q8BU85 253 aa10.61□□□□□ -0.71
Msh6-201ENSMUST00000005503 Lrrc25Q8K1T1 297 aa10.61□□□□□ -0.71
Msh6-201ENSMUST00000005503 Q8VC23 124 aa10.61□□□□□ -0.71
Msh6-201ENSMUST00000005503 MmdQ9CQY7 238 aa10.61□□□□□ -0.71
Msh6-201ENSMUST00000005503 Rpl11Q9CXW4 178 aaKnown RBP10.61□□□□□ -0.71
Msh6-201ENSMUST00000005503 Mrps11Q9DCA2 191 aaKnown RBP10.61□□□□□ -0.71
Msh6-201ENSMUST00000005503 Npc2Q9Z0J0 149 aa10.61□□□□□ -0.71
Msh6-201ENSMUST00000005503 A730046J19RikA0A1B0GSN8 89 aa10.61□□□□□ -0.71
Msh6-201ENSMUST00000005503 Cypt3B1AY64 174 aa10.61□□□□□ -0.71
Msh6-201ENSMUST00000005503 Vmn1r119E9Q4H3 307 aa10.61□□□□□ -0.71
Msh6-201ENSMUST00000005503 Gm21882J3QN86 361 aa10.61□□□□□ -0.71
Msh6-201ENSMUST00000005503 Ren2P00796 401 aa10.61□□□□□ -0.71
Msh6-201ENSMUST00000005503 B2mP01887 119 aa10.61□□□□□ -0.71
Msh6-201ENSMUST00000005503 P18530 117 aa10.61□□□□□ -0.71
Msh6-201ENSMUST00000005503 Smim15Q3UTD9 74 aa10.61□□□□□ -0.71
Msh6-201ENSMUST00000005503 Tnfrsf13cQ9D8D0 175 aa10.61□□□□□ -0.71
Msh6-201ENSMUST00000005503 Notch3Q61982 2318 aa10.61□□□□□ -0.71
Msh6-201ENSMUST00000005503 Awat1A2ADU9 328 aa10.61□□□□□ -0.71
Msh6-201ENSMUST00000005503 CxadrP97792 365 aa10.61□□□□□ -0.71
Msh6-201ENSMUST00000005503 Trappc1Q5NCF2 145 aa10.61□□□□□ -0.71
Msh6-201ENSMUST00000005503 Fam19a2Q7TPG7 131 aa10.61□□□□□ -0.71
Msh6-201ENSMUST00000005503 Spink2Q8BMY7 86 aa10.61□□□□□ -0.71
Msh6-201ENSMUST00000005503 TirapQ99JY1 241 aa10.61□□□□□ -0.71
Msh6-201ENSMUST00000005503 Fam213bQ9DB60 201 aa10.61□□□□□ -0.71
Msh6-201ENSMUST00000005503 Lhx2Q9Z0S2 406 aa10.61□□□□□ -0.71
Msh6-201ENSMUST00000005503 Sumo3Q9Z172 110 aa10.61□□□□□ -0.71
Msh6-201ENSMUST00000005503 Vmn1r61W4VSP5 300 aa10.61□□□□□ -0.71
Msh6-201ENSMUST00000005503 Dopey2Q3UHQ6 2295 aa10.6□□□□□ -0.71
Msh6-201ENSMUST00000005503 Defa-rs7P50715 91 aa10.6□□□□□ -0.71
Msh6-201ENSMUST00000005503 Nutf2P61971 127 aa10.6□□□□□ -0.71
Msh6-201ENSMUST00000005503 RhodP97348 210 aa10.6□□□□□ -0.71
Msh6-201ENSMUST00000005503 Ppp1r3cQ7TMB3 317 aa10.6□□□□□ -0.71
Msh6-201ENSMUST00000005503 Eda2rQ8BX35 297 aa10.6□□□□□ -0.71
Msh6-201ENSMUST00000005503 Spsb4Q8R5B6 273 aa10.6□□□□□ -0.71
Msh6-201ENSMUST00000005503 Derl1Q99J56 251 aa10.6□□□□□ -0.71
Msh6-201ENSMUST00000005503 Prok2Q9QXU7 128 aa10.6□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 63.1 ms